subExpId expId condition controlInfo treatmentInfo biological file citation 79 213 UV 10min UV treated cells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1277.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 80 214 Control 20min untreatedcells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1278.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 81 215 UV 20min UV treated cells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1282.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 82 216 Control 40min untreatedcells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1285.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 83 217 Control 5min untreatedcells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1287.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 84 218 Control 60min untreatedcells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1290.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 85 219 UV 60min UV treated cells, 25 ug total RNA untreated cells, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/1292.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 86 220 Control 0' in minimal medium 0.2% glu 5' in minimal medium 0.2% glu 1 /usr2/people/mprice/SMD/EC/1592.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 87 221 Control 0' in minimal medium 0.2% glu 15' in minimal medium 0.2% glu 1 /usr2/people/mprice/SMD/EC/1593.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 88 222 Control 0' in minimal medium 0.2% glu 30' in minimal medium 0.2% glu 1 /usr2/people/mprice/SMD/EC/1595.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 89 223 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 0 min Nov0 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1596.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 90 224 Control 0' in minimal medium 0.2% glu 60' in minimal medium 0.2% glu 1 /usr2/people/mprice/SMD/EC/1597.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 91 225 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 1 min Nov0 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1598.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 92 226 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 20 min Nov0 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1599.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 93 227 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 7 min Nov0 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1600.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 94 228 Genomic dnaC fully replicated, 2 ug Sau3AI, pdN6 RT 2 min Nov10 ug/ml, 2 ug Sau3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1601.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 95 229 Genomic dnaC fully replicated, 2 ug Sau3AI, pdN6 RT 40 min Nov10 ug/ml, 2 ug Sau3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1602.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 96 230 Genomic dnaC fully replicated, 2 ug Sau3AI, pdN6 RT 80 min Nov10 ug/ml, 2 ug Sau3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1603.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 97 231 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 2 min Nov2 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1604.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 98 232 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 40 min Nov2 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1606.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 99 233 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 2 min Nov5 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1608.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 100 234 Genomic dnaC fully replicated, 2 ug Sau3AI, pdN6 RT 40 min Nov5 ug/ml, 2 ug Sau3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1610.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 101 235 Genomic dnaC fully replicated, 2 ug Sau3AI, pdN6 RT 80 min Nov5 ug/ml, 2 ug Sau3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/1611.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 102 236 Tryptophan 0' in minimal medium 0.2% glu 5' in minimal medium 0.2% glu 50ug/ml Trp 1 /usr2/people/mprice/SMD/EC/1637.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 103 237 Tryptophan 0' in minimal medium 0.2% glu 15' in minimal medium 0.2% glu 50ug/ml Trp 1 /usr2/people/mprice/SMD/EC/1638.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 104 238 Tryptophan 0' in minimal medium 0.2% glu 30' in minimal medium 0.2% glu 50ug/ml Trp 1 /usr2/people/mprice/SMD/EC/1639.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 105 239 Tryptophan 0' in minimal medium 0.2% glu 60' in minimal medium 0.2% glu 50ug/ml Trp 1 /usr2/people/mprice/SMD/EC/1641.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 106 240 Tryptophan minimal medium 0.2% glu without trp minimal medium 0.2% glu with trp 1 /usr2/people/mprice/SMD/EC/1642.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 107 241 TrpMutant tnaA2,W3110 min Trp 50ug/ml tnaA2trpR2, W3110 min Trp 50ug/ml 1 /usr2/people/mprice/SMD/EC/1643.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 108 242 TrpMutant W3110 wt, min.2%glucose, 30 ug RNA W3110 trpR2,min.2%glucose, 30 ug RNA 1 /usr2/people/mprice/SMD/EC/1644.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 109 243 TrpMutant wt 50ug/ml Trp trpR2 50ug/ml Trp 1 /usr2/people/mprice/SMD/EC/1646.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 110 244 TrpMutant W3110 trpR2 -trp W3110 trpR2 with trp 1 /usr2/people/mprice/SMD/EC/1647.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 111 245 TrpMutant trpEA2,W3110 min Trp 50ug/ml trpEA2trpR2, W3110 min Trp 50ug/ml, 30 ug total 1 /usr2/people/mprice/SMD/EC/1649.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 112 246 TrpMutant tnaA2,W3110 min,30 ug total tnaA2trpA46PR9, W3110 min , 30 ug total 1 /usr2/people/mprice/SMD/EC/1650.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 113 247 Control 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 20 min after NOuv, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1908.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 114 248 Control 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 60 min after NOuv, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1909.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 115 249 lexA 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 10 min after UV treatment, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1911.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 116 250 lexA 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 20 min after UV treatment, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1912.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 117 251 lexA 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 40 min after UV treatment, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1913.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 118 252 lexA 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 5 min after UV treatment, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1914.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 119 253 lexA 0', before UV treatment, 25 ug total RNA, 2 ug pdN6 lexA 60 min after UV treatment, 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1915.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 120 254 Control 0' wt, before UV treatment, 25 ug total RNA, 2 ug pdN6 0' lexA, before UV 25 ug total RNA, 2 ug pdN6 1 /usr2/people/mprice/SMD/EC/1916.VIMSS Courcelle J et al.(2001) Genetics 158(1):41-64 121 255 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 0 min Nov500 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/2353.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 122 256 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 1 min Nov500 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/2354.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 123 257 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 20 min Nov500 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/2355.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 124 258 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 20 min Nov50 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/2357.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 125 259 Genomic dnaC fully replicated, 2 ug Say3AI, pdN6 RT 7 min Nov500 ug/ml, 2 ug Say3AI, pdN6 RT 1 /usr2/people/mprice/SMD/EC/2358.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 126 260 Control reference 0', min .2% glu, 25 ug RNA 60' in min .2% glu, 25 ug RNA 1 /usr2/people/mprice/SMD/EC/5265.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 127 261 Tryptophan reference 0', min .2% glu, 25 ug RNA 60' 50 ug/ml Trp in min .2% glu, 25 ug RNA 1 /usr2/people/mprice/SMD/EC/5266.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 128 262 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 5' 10 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5268.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 129 263 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 15' 10 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5272.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 130 264 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 30' 10 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5273.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 131 265 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 60' 10 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5277.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 132 266 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 5' 15 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5278.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 133 267 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 15' 15 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5281.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 134 268 IndoleAcrylate 0' minimal 0.2% glu, 25 ug total RNA 30' 15 ug/ml indole aa, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/5284.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 135 269 IndoleAcrylate 0' minimal medium 0.2% glu, 25 ug total 60' 15 ug/ml indole aa, minimal medium 0.2% glu, 25 ug total 1 /usr2/people/mprice/SMD/EC/5287.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 136 270 mRNAdecay LB at 30C before rifampicin 2' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C 1 /usr2/people/mprice/SMD/EC/8377.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 137 271 mRNAdecay LB at 30C before rifampicin 4' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C 1 /usr2/people/mprice/SMD/EC/8378.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 138 272 mRNAdecay LB at 30C before rifampicin 6' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C 1 /usr2/people/mprice/SMD/EC/8379.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 139 273 mRNAdecay LB at 30C before rifampicin 8' RNA Decay of MG1655 (Repaired NCM 3416) in LB at 30 C 1 /usr2/people/mprice/SMD/EC/8380.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 141 275 Genomic 1005, LB 0.2% glucose (tus repressed) 1005, LB 0.4% arabinose, 90' (tus induced) 1 /usr2/people/mprice/SMD/EC/8457.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 142 276 Genomic 1005, LB 0.2% glucose (tus repressed) 1005, LB 0.4% arabinose, 2.5 hr (tus induced) 1 /usr2/people/mprice/SMD/EC/8458.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 143 277 Genomic 1005, LB 0.2% glucose (tus repressed) 1005, LB 0.4% arabinose, 3.5 hr (tus induced) 1 /usr2/people/mprice/SMD/EC/8459.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 144 278 mRNAdecay M9 .2% Glucose at 30C before rifampicin 2' RNA Decay of MG1655 (Repaired NCM 3416) in M9 0.2% Glucose Trial A 1 /usr2/people/mprice/SMD/EC/8536.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 145 279 mRNAdecay M9 .2% Glucose at 30C before rifampicin 4' RNA Decay of MG1655 (Repaired NCM 3416) in M9 0.2% Glucose Trial A 1 /usr2/people/mprice/SMD/EC/8538.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 146 280 mRNAdecay M9 .2% Glucose at 30C before rifampicin 6' RNA Decay of MG1655 (Repaired NCM 3416) in M9 0.2% Glucose Trial A 1 /usr2/people/mprice/SMD/EC/8540.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 147 281 mRNAdecay M9 .2% Glucose at 30C before rifampicin 8' RNA Decay of MG1655 (Repaired MCM 3416) in M9 0.2% Glucose Trial A 1 /usr2/people/mprice/SMD/EC/8542.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 148 278 mRNAdecay M9 .2% Glucose at 30C before rifampicin 2' RNA Decay of MG1655 (Repaired NCM 3416) in M9 0.2% Glucose Trial A 2 /usr2/people/mprice/SMD/EC/8582.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 149 279 mRNAdecay M9 .2% Glucose at 30C before rifampicin 4' RNA Decay of MG1655 (Repaired NCM 3416) in M9 0.2% Glucose Trial A 2 /usr2/people/mprice/SMD/EC/8584.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 150 280 mRNAdecay M9 .2% Glucose at 30C before rifampicin 6' RNA Decay of MG1655 (Repaired NCM 3416) in M9 0.2% Glucose Trial A 2 /usr2/people/mprice/SMD/EC/8586.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 151 281 mRNAdecay M9 .2% Glucose at 30C before rifampicin 8' RNA Decay of MG1655 (Repaired MCM 3416) in M9 0.2% Glucose Trial A 2 /usr2/people/mprice/SMD/EC/8589.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 152 282 Genomic dnaC2 90' at 42 deg, 2 ug gen DNA, pdN6 RT dnaC2 30' at 30 deg, 2 ug gen DNA, pdN6 RT 1 /usr2/people/mprice/SMD/EC/9152.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:9419-24 153 283 Control 0' in minimal medium 0.2% glu, 25 ug total RNA 60' in minimal medium 0.2% glu, 25 ug total RNA 1 /usr2/people/mprice/SMD/EC/9395.VIMSS Khodursky AB et al.(2000) Proc Natl Acad Sci U S A 97:12170-5 154 284 Control N3433 (wt) in LB at 30 degrees C N3433 (rne deletion) pBAD-RNE w/out Arabinose in LB at 30 degrees C 1 /usr2/people/mprice/SMD/EC/13838.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 155 285 rng N3433 (wt) in LB at 30 degrees C N3433 (rng deletion) in LB at 30 degrees C 1 /usr2/people/mprice/SMD/EC/13840.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 156 286 Leu W3110 wild-type grown to OD420~0.3 in MOPS (ile-0.4mM final, val-0.4mM, thi-10 uM) plus Leu (10mM final) vs. wild-type without Leu, EtOH-PhOH, hot phenol (Gross protocol) W3110 wt in MOPS (ile, val, thi) at OD420~0.3, 20 ug total,10 ug pdN6 1 /usr2/people/mprice/SMD/EC/14829.VIMSS Tani TH, et al. (2002) Proc Natl Acad Sci U S A 99(21):13471-6 157 287 lrp W3110 lrp- grown to OD420~0.3 in MOPS (ile-0.4mM final, val-0.4mM, thi-10 uM) plus Leu (10mM final) vs. wild-type without LeuEtOH-PhOH, hot phenol (Gross protocol) W3110 wt in MOPS (ile, val, thi) at OD420~0.3, 20 ug total,10 ug pdN6 1 /usr2/people/mprice/SMD/EC/14830.VIMSS Tani TH, et al. (2002) Proc Natl Acad Sci U S A 99(21):13471-6 158 288 lrp W3110 lrp- grown to OD420~0.3 in MOPS (ile-0.4mM final, val-0.4mM, thi-10 uM) without Leu vs. wild-type without LeuEtOH-PhOH, hot phenol (Gross protocol) W3110 wt in MOPS (ile, val, thi) at OD420~0.3, 20 ug total,10 ug pdN6 1 /usr2/people/mprice/SMD/EC/14831.VIMSS Tani TH, et al. (2002) Proc Natl Acad Sci U S A 99(21):13471-6 159 289 lrp W3110 lrp- grown to OD420~0.3 in MOPS (ile-0.4mM final, val-0.4mM, thi-10 uM) plus Leu (10mM final) vs. lrp- grown without LeuEtOH-PhOH, hot phenol (Gross protocol) W3110 lrp- in MOPS (ile, val, thi) to OD420~0.3, 20 ug total RNA, 10 ug pdN6 1 /usr2/people/mprice/SMD/EC/14832.VIMSS Tani TH, et al. (2002) Proc Natl Acad Sci U S A 99(21):13471-6 160 284 Control N3433 (wt) in LB at 30 degrees C N3433 (rne deletion) pBAD-RNE w/out Arabinose in LB at 30 degrees C 2 /usr2/people/mprice/SMD/EC/15336.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 161 290 Control N3433 (wt) pPM30 in LB at 30 degrees C N3433 (wt) pRNG3 in LB at 30 degrees 1 /usr2/people/mprice/SMD/EC/15337.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 162 290 Control N3433 (wt) pPM30 in LB at 30 degrees C N3433 (wt) pRNG3 in LB at 30 degrees 2 /usr2/people/mprice/SMD/EC/15338.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 163 291 rne N3433 (wt) pPM30 in LB at 30 degrees C N3433 (rne deletion) pRNG3 at 30 degrees C 1 /usr2/people/mprice/SMD/EC/15339.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 164 291 rne N3433 (wt) pPM30 in LB at 30 degrees C N3433 (rne deletion) pRNG3 at 30 degrees C 2 /usr2/people/mprice/SMD/EC/15340.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 165 292 Control N3433 (wt) pPM30 in LB at 30 degrees C N3433 (rne deletion) pNRNE5 at 30 degrees C 1 /usr2/people/mprice/SMD/EC/15341.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 166 292 Control N3433 (wt) pPM30 in LB at 30 degrees C N3433 (rne deletion) pNRNE5 at 30 degrees C 2 /usr2/people/mprice/SMD/EC/15342.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 167 285 rng N3433 (wt) in LB at 30 degrees C N3433 (rng deletion) in LB at 30 degrees C 2 /usr2/people/mprice/SMD/EC/15343.VIMSS Lee K, et al. (2002) Mol Microbiol 43(6):1445-56 168 293 Minimal Genomic Transcript Abundance in M9 at 30 degrees OD600=0.8 1 /usr2/people/mprice/SMD/EC/25822.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 169 293 Minimal Genomic Transcript Abundance in M9 at 30 degrees OD600=0.8 2 /usr2/people/mprice/SMD/EC/25825.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 170 294 Rich Genomic Transcript Abundance in LB at 30 degrees OD600=0.8 1 /usr2/people/mprice/SMD/EC/25827.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 171 294 Rich Genomic Transcript Abundance in LB at 30 degrees OD600=0.8 2 /usr2/people/mprice/SMD/EC/25831.VIMSS Bernstein JA, et al. (2002) Proc Natl Acad Sci U S A 99(15):9697-702 172 295 rraA KSL2009 plus pTrc99A KSL2009 plus pTrc99A-RraA 1 /usr2/people/mprice/SMD/EC/32746.VIMSS Lee K, et al.(2003)Cell 114:623-634 173 296 rne KSL2000, 0.1 % arabinose KSL2000, no arabinose 1 /usr2/people/mprice/SMD/EC/32748.VIMSS Lee K, et al.(2003)Cell 114:623-634 174 297 rne KSL2009, 0.1% arabinose KSL2009, no arabinose 1 /usr2/people/mprice/SMD/EC/32749.VIMSS Lee K, et al.(2003)Cell 114:623-634 175 298 rraA KSL2000 plus pTrc99A KSL2000 plus pTrc99A-RraA 2 /usr2/people/mprice/SMD/EC/32751.VIMSS Lee K, et al.(2003)Cell 114:623-634 176 299 rraA JCB570 JQ004 (rraA) 1 /usr2/people/mprice/SMD/EC/32757.VIMSS Lee K, et al.(2003)Cell 114:623-634 177 300 rraA JCB570 JQ004 (rraA) 1 /usr2/people/mprice/SMD/EC/32759.VIMSS Lee K, et al.(2003)Cell 114:623-634 178 301 rraA JCB570 JQ004 (rraA) 1 /usr2/people/mprice/SMD/EC/32760.VIMSS Lee K, et al.(2003)Cell 114:623-634