Taxon Scaffold Gene1 Gene2 Consecutive Sep Code Strand1 Strand2 GNScore GNWithin GNAll GNMinus CAI CAI.Alm CBI COG COGanno COGfun Annotation nCAI nCAI.Alm nCBI nCOG nCOGanno nCOGfun nAnnotation MI HK CAIdsqr CAIdxdy CAIlogpratio CAIdxdyR CAIdsqrR COGsim N1 N2 forward forwardplus sumBias bbfGNScore bbfGNMinus bbfGNWithin bbfGNAll bbfHK bbfMI bbfCAIdxdyR bbfCAIdsqrR COGsimClass cfCOG pSame groupIndexD pSameD pOpLogistic pOpDistance pOp1 bOp1 pCAI pOp bOp pOp2 pSame1 pOpLogisticLike pOpLogisticM same pTrained pTrained1 pTrainedD pTrainedSame pTrainedCAI bbfTrainedGNScore bbfTrainedGNMinus bbfTrainedGNWithin bbfTrainedGNAll bbfTrainedHK bbfTrainedMI bbfTrainedCAIdxdyR bbfTrainedCAIdsqrR pTrainedOpLogistic cfCOGTrained 1423 33 36606 36607 1 167 Same + + 0.000000 0.09342997 2.2196513 -1.9445355 1.297158 2.912095 1.0065223 31 Cysteine synthase E cysteine synthetase A 1.439570 3.136846 1.0509688 147 Anthranilate/para-aminobenzoate synthases component I EH para-aminobenzoate synthase (subunit A) 0.0073254140 24 2.028109e-02 -2.316014e-03 -0.0857296300 -0.1339079000 1.025938e+00 43 24 TRUE TRUE 61 0.7068768 0.4394057 1.1631070 0.9932597 2.2615675 0.7197230 0.9039696 0.8485751 U 0.8425356 0.7024375 32.400000 0.27736306 0.4341980 0.29123644 0.22752786 FALSE 0.4701952 0.20723327 FALSE 0.131569485 0.7024375 0.3078453 0.4774850 0 0.02219587 0.02997381 0.1807796 0.2583573 0.4235043 -0.818558786 -1.11020679 -0.26039184 -0.40790567 0.53230632 -0.52450885 -0.11524288 -0.176017491 0.12282726 0.4519851 1423 33 36610 36611 1 -7 Same + + 22.669224 6.67542871 70.1920707 69.1251420 1.481412 3.304197 1.0607095 294 Dihydropteroate synthase and related enzymes H dihydropteroate synthase 1.390349 2.894065 0.9736941 1539 Dihydroneopterin aldolase H dihydroneopterin aldolase 0.1858258000 31 8.292449e-03 -1.847036e-03 -0.0334592400 -0.2034992000 8.671218e-01 H 45 31 TRUE TRUE 65 4.4420106 4.2726938 3.0925865 4.4821590 2.4383926 2.4173830 0.8516131 0.8913824 Y 2.7866030 0.9949602 2.586667 0.81072918 0.9932344 0.82097222 0.99841229 TRUE 0.4754208 0.99824841 TRUE 0.971791512 0.9949602 0.8987270 0.9870839 0 0.98221163 0.98654994 0.8267635 0.9750759 0.4294811 1.320616788 1.40629125 0.83772308 1.45560249 0.54770850 0.85158895 -0.26748414 -0.170033607 0.93890987 2.3025851 1423 33 36655 36656 1 2 Same + + 104.483459 6.67542871 246.6825003 246.6825003 1.244456 2.803514 0.9073245 92 Ribosomal protein S3 J ribosomal protein S3 (BS3) 1.222790 2.760052 0.9175379 197 Ribosomal protein L16/L10E J ribosomal protein L16 0.1732671000 60 4.694089e-04 3.493473e-02 0.9339525000 0.9217177000 5.003319e-04 J 60 60 TRUE TRUE 110 5.1416117 4.8414212 3.0925865 5.2552798 2.9367570 2.3778268 1.4019045 1.1596974 Y 2.7866030 0.9967861 7.146667 0.82199584 0.9956935 0.83175567 0.99906426 TRUE 0.6304729 0.99945134 TRUE 0.986470693 0.9967861 0.9024810 0.9917396 0 0.99477934 0.99384110 0.8684035 0.9839573 0.5414594 1.170213880 1.58045912 0.84696490 1.41318953 0.59207545 0.83813577 0.02345056 0.545415100 0.96071226 2.3581549 1423 33 36677 36678 1 128 Same + + 8.157053 6.67542871 20.8299816 18.8483321 1.217986 2.759306 0.9652579 203 Ribosomal protein L17 J ribosomal protein L17 (BL15) 1.460665 3.238443 1.0664143 1122 ABC-type cobalt transport system, ATPase component P alternate gene name: ybaD~similar to ABC transporter (ATP-binding protein) 0.0186674400 34 5.889287e-02 -8.077772e-03 -0.3131031000 -0.3747710000 1.845846e+00 0 47 34 TRUE TRUE 132 3.5604883 3.2290828 3.0925865 3.2222385 2.5206472 0.8624334 0.7527001 0.7032098 N 0.9470624 0.9759958 28.993333 0.30935457 0.9671501 0.32411043 0.92951526 TRUE 0.3875548 0.89299113 TRUE 0.634777126 0.9759958 0.8597852 0.9402612 0 0.17115456 0.23335709 0.1901096 0.7648418 0.4041951 0.795162880 0.86331381 0.86059073 0.98589309 0.57962424 -0.31725649 -0.47303942 -0.216408691 0.56459860 0.2336149 1423 33 36693 36694 1 5 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.507094 3.296811 0.9861512 2819 Predicted hydrolase of the alpha/beta superfamily R ybbA 1.464135 3.587797 1.1790756 609 ABC-type Fe3+-siderophore transport system, permease component P integral membrane protein 0.0003728161 1 1.845470e-03 3.733687e-03 0.0984953200 0.3186168000 1.148704e-01 2 1 FALSE TRUE 142 0.7068768 0.7004818 0.7887573 0.6309360 0.6869968 0.6467541 1.1578970 1.1345723 U 0.8425356 0.6465615 8.326667 0.82235325 0.2698738 0.83209749 0.63113995 TRUE 0.5105103 0.64087361 TRUE 0.542708043 0.6465615 0.1973134 0.4145726 0 0.71692043 0.68074248 0.8633703 0.4555536 0.5429069 -0.815174492 -0.73114457 -0.60744791 -1.02430826 -0.62202874 -0.64262179 0.13032991 0.068406718 0.25229990 0.4610350 1423 33 36696 36697 1 91 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.303177 2.749759 0.9914400 614 ABC-type Fe3+-hydroxamate transport system, periplasmic component P iron-binding protein 1.422663 3.090784 1.0415784 2207 AraC-type DNA-binding domain-containing proteins K alternate gene name: yzbC~similar to transcriptional regulator (AraC/XylS family) 0.0000000000 0 1.427697e-02 -2.139695e-04 -0.0288377300 0.0221585500 6.554975e-01 0 2 0 FALSE TRUE 139 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0130054 0.9576027 N 0.9470624 0.6604288 24.840000 0.30530189 0.3132497 0.31995400 0.16698517 FALSE 0.4889022 0.16090023 FALSE 0.108593096 0.6604288 0.2246766 0.4295108 0 0.08104803 0.08481119 0.2456840 0.4172407 0.4876303 -0.798889237 -0.72021635 -0.59016954 -0.98670780 -0.88942625 -0.63424498 0.23592441 -0.115161252 0.22150151 0.2542341 1423 33 36715 36716 1 519 Same + + 0.000000 -1.18313610 0.0000000 -1.1831361 1.446935 3.213956 1.0182615 350 Methylated DNA-protein cysteine methyltransferase L O6-methylguanine-DNA methyltransferase 1.477732 3.716723 1.1680500 1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit CP NADH dehydrogenase (subunit 5) 0.0111935800 3 9.484354e-04 1.484208e-03 0.0684067600 0.1301984000 1.005166e-01 6 3 TRUE TRUE 138 0.7068768 0.4488664 0.4079109 0.6309360 0.7788880 0.7626700 1.0514558 1.1389699 U 0.8425356 0.6107425 39.466667 0.05447537 0.1487192 0.05809646 0.00996488 FALSE 0.5167859 0.01064983 FALSE 0.008871555 0.6107425 0.1268423 0.3778654 0 0.07668861 0.06204888 0.2436517 0.3425489 0.5566462 -0.807037040 -1.05566852 -0.97998142 -1.01023995 -0.30188091 -0.40625684 0.22050335 0.068817125 0.17036918 0.4788926 1423 33 36881 36882 1 574 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.479093 3.113809 1.0084209 1733 Predicted transcriptional regulators K similar to hypothetical proteins 1.454008 3.228680 1.0907332 1020 Non-ribosomal peptide synthetase modules and related proteins Q surfactin synthetase 0.0350528400 1 6.292564e-04 1.931673e-03 0.0636939700 0.1707950000 6.767841e-02 0 6 1 TRUE TRUE 204 0.7068768 0.7004818 0.7887573 0.6309360 0.6869968 1.1639876 1.0729148 1.1467429 N 0.9470624 0.6604288 39.633333 0.05105382 0.3132497 0.05446056 0.02395242 FALSE 0.5085327 0.02476353 FALSE 0.015875804 0.6604288 0.2246766 0.4295108 0 0.09457533 0.08174196 0.2432165 0.4099380 0.5398909 -0.805562240 -0.72792077 -0.61978171 -1.01669277 -0.62946305 0.05448843 0.17068532 0.126565745 0.21690653 0.2076394 1423 33 36886 36887 1 101 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.483535 3.227424 0.9962247 3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis Q surfactin synthetase 1.510619 3.631422 1.1226796 477 Permeases of the major facilitator superfamily GEPR ycxA 0.0000000000 0 7.335334e-04 5.627918e-03 0.1785391000 0.4645079000 3.167413e-02 11 0 TRUE TRUE 209 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.2423851 1.1551138 U 0.8425356 0.6465615 25.940000 0.29914428 0.2698738 0.31363429 0.13626803 FALSE 0.5510782 0.16224598 FALSE 0.114100959 0.6465615 0.1973134 0.4145726 0 0.10543437 0.09182445 0.2293180 0.4601276 0.5382525 -0.805518532 -0.71735802 -0.60924928 -0.98862773 -0.87693428 -0.67483879 0.08437520 0.227515929 0.25362091 0.4610350 1423 33 36999 37000 1 115 Same + + 1.049822 1.50385237 3.4860514 3.4860514 1.399091 3.116186 1.0088941 2337 Growth inhibitor T similar to hypothetical proteins 1.402279 3.098763 1.0291132 1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) T alternate gene name: ycxR 0.0231620100 5 1.016154e-05 4.038756e-04 0.0321853900 0.0634411300 9.990087e-04 T 17 5 TRUE TRUE 256 2.0062463 1.9984139 1.4783871 1.4705977 0.9173329 0.9543540 1.0215773 1.1597806 Y 2.7866030 0.9480357 27.626667 0.29972630 0.9267893 0.31423186 0.84419569 TRUE 0.5115659 0.85018535 TRUE 0.645629016 0.9480357 0.8025344 0.8759672 0 0.55761471 0.50607346 0.2038908 0.9103164 0.5516135 -0.143875191 0.17152749 0.22783950 -0.12693115 -0.07624994 -0.20294701 0.26211489 0.544647077 0.80002441 2.2891621 1423 33 37007 37008 1 243 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.439262 3.113550 1.0148983 2208 Serine phosphatase RsbU, regulator of sigma subunit TK serine phosphatase (dephosphorylation of RsbS) 1.371624 2.920404 1.0239881 - - - ydcF 0.0000000000 0 4.574856e-03 -9.064804e-04 0.0063242260 -0.0771195100 4.290202e-01 3 0 TRUE TRUE 264 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.9480941 1.0422585 U 0.8425356 0.6465615 35.880000 0.16142628 0.2698738 0.17087185 0.06642693 FALSE 0.4968670 0.06565397 FALSE 0.044644298 0.6465615 0.1973134 0.4145726 0 0.08887294 0.07926086 0.2010367 0.4626253 0.5311989 -0.808935790 -0.73090361 -0.59825883 -1.00724979 -0.88402626 -0.63576325 0.04985190 -0.069013818 0.25490801 0.4788926 1423 33 37136 37137 1 1564 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.210195 2.727659 0.8558250 459 Chaperonin GroEL (HSP60 family) O class I heat-shock protein (molecular chaperonin) 1.579428 3.585526 1.0083874 - - - ydiM 0.0000000000 0 1.363331e-01 -3.340552e-02 -0.8871988000 -0.9343609000 3.737966e+00 71 0 TRUE TRUE 307 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.6385189 0.6091346 U 0.8425356 0.6465615 40.173333 0.04103465 0.2698738 0.04380370 0.01557025 FALSE 0.3044697 0.00687610 FALSE 0.004583437 0.6465615 0.1973134 0.4145726 0 0.07045687 0.10134591 0.2497899 0.4601351 0.4019531 -0.808979725 -0.72173456 -0.60990955 -1.01729556 -0.88052454 -0.63915322 -0.72742332 -0.234568604 0.25300953 0.4700036 1423 33 37175 37176 1 323 Same + + 0.000000 -1.18931457 0.6069260 -1.1893146 1.462765 2.831836 0.9904393 - - - yebG 1.381828 3.220916 1.0824252 41 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase F phosphoribosylaminoimidazole carboxylase I 0.0123228900 3 6.550823e-03 -1.635599e-03 -0.0198167800 -0.1699837000 6.801337e-01 3 55 TRUE TRUE 330 0.7068768 0.4464683 0.3954529 0.4157343 0.7788880 0.7746428 0.8740777 0.9509628 U 0.8425356 0.6092637 37.613333 0.10284865 0.1434112 0.10931346 0.01883160 FALSE 0.4778621 0.01726230 FALSE 0.014626033 0.6092637 0.1239394 0.3764052 0 0.04435176 0.05351721 0.2110853 0.3471644 0.4507879 -0.810118105 -1.04745840 -0.97255738 -0.70852569 -0.32008092 -0.41605356 -0.19177084 -0.108413749 0.17445836 0.4754237 1423 33 37221 37222 1 127 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.505477 3.495970 1.0813580 702 Predicted nucleoside-diphosphate-sugar epimerases MG alternate gene name: yeeM, yfxB~similar to hypothetical proteins 1.680917 3.476732 0.9654237 - - - cotJA 0.0030846370 1 3.077909e-02 2.201050e-02 0.7798369000 0.7414389000 5.793660e-02 15 1 TRUE TRUE 358 0.7068768 0.7004818 0.7887573 0.6309360 0.6869968 0.6702892 1.3552358 1.1488362 U 0.8425356 0.6465615 28.893333 0.30806419 0.2698738 0.32278727 0.14131051 FALSE 0.5999639 0.19795372 FALSE 0.140996071 0.6465615 0.1973134 0.4145726 0 0.08963875 0.07702944 0.1947437 0.4647818 0.5412450 -0.798889237 -0.71452762 -0.58972614 -0.98670781 -0.61139690 -0.58165431 0.04398682 0.189706225 0.25655856 0.4843924 1423 33 37224 37225 1 125 Same + + 0.000000 -1.18313610 0.0000000 -1.5130937 1.434143 3.094394 0.9294743 3546 Mn-containing catalase P cotJC 1.554050 3.489398 1.0043691 454 Histone acetyltransferase HPA2 and related acetyltransferases KR alternate gene name: yeeN, yfxC, yfxD~similar to hypothetical proteins 0.0491927100 5 1.437767e-02 1.771315e-03 0.1253417000 0.0949398200 6.649802e-01 5 9 TRUE TRUE 361 0.7068768 0.4429640 0.4079109 0.6309360 0.9173329 1.4206407 1.0302554 0.9550018 U 0.8425356 0.6110297 28.653333 0.30494819 0.1497471 0.31959113 0.07172886 FALSE 0.4923989 0.06973045 FALSE 0.058505846 0.6110297 0.1274061 0.3781494 0 0.05009385 0.05072058 0.1974430 0.3579184 0.4967267 -0.806397170 -1.06417093 -0.93984359 -1.01349852 -0.05732281 0.25391647 0.20594548 -0.125817291 0.17843034 0.4932813 1423 33 37315 37316 1 140 Same + + 0.000000 -3.48376288 0.0000000 -4.0166837 1.566485 3.322261 1.0442708 2188 Transcriptional regulators K transcriptional regulator (GntR family) 1.286330 2.775543 0.9554139 778 Nitroreductase C similar to NAD(P)H-flavin oxidoreductase 0.0471410200 11 7.848676e-02 -1.959075e-02 -0.4840355000 -0.8298940000 3.323330e+00 0 11 16 TRUE TRUE 402 0.7068768 0.4334370 0.3575018 0.6309360 1.5189177 1.3887365 0.6438252 0.6150050 N 0.9470624 0.6195648 30.053333 0.31425207 0.1798600 0.32913022 0.09132103 FALSE 0.3083292 0.04287879 FALSE 0.033268116 0.6195648 0.1441717 0.3866652 0 0.02519086 0.03624275 0.1864938 0.2898230 0.4072946 -0.798656518 -1.08394392 -1.03418582 -0.98853338 0.34007398 0.21021574 -0.67553116 -0.243998539 0.14092305 0.2076394 1423 33 37353 37354 1 106 Same + + 0.000000 0.00000000 0.0000000 -0.3119390 1.452318 3.303751 1.0698505 1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific G phosphotransferase system (PTS) arbutin-like enzyme IIBC component 1.535244 3.551511 1.1307788 1132 ABC-type multidrug transport system, ATPase and permease components V similar to ABC transporter (ATP-binding protein) 0.0028706040 5 6.876731e-03 3.600402e-03 0.1535599000 0.2515510000 3.376590e-01 0 5 20 TRUE TRUE 410 0.7068768 0.4732125 0.7887573 0.6309360 0.9173329 0.6679915 1.1188167 1.0818606 N 0.9470624 0.6707826 26.526667 0.30048558 0.3444663 0.31501135 0.18415598 FALSE 0.5175079 0.19491570 FALSE 0.130148250 0.6707826 0.2451364 0.4409454 0 0.06281165 0.04733505 0.2172304 0.3148536 0.5742637 -0.806397170 -0.97119289 -0.60817826 -1.01349852 -0.05732281 -0.59292389 0.14457967 -0.064151980 0.15185409 0.2282587 1423 33 37460 37461 1 179 Same + + 6.382831 6.67542871 13.0582594 11.6525725 1.502550 3.154361 1.0070752 1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) K transcription antiterminator 1.346171 3.264184 1.1251088 580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) G glycerol uptake facilitator 0.0926263300 13 2.445452e-02 -6.101270e-03 -0.1357626000 -0.4882555000 1.957142e+00 0 13 36 TRUE TRUE 469 3.3731315 2.9164862 3.0925865 2.8203792 1.6938099 1.9129392 0.7123410 0.6924846 N 0.9470624 0.9738413 33.173333 0.25493872 0.9641226 0.26810660 0.90191328 TRUE 0.3713359 0.84451015 TRUE 0.544481260 0.9738413 0.8553669 0.9351127 0 0.14144659 0.19734613 0.1816192 0.7375956 0.4012253 0.639061749 0.76117579 0.83273193 0.79401099 0.36354477 0.62360301 -0.60261296 -0.234799649 0.52559050 0.2282587 1423 33 37462 37463 1 141 Same + + 32.549346 6.67542871 59.1252517 57.0650492 1.368316 3.025635 1.0357880 554 Glycerol kinase C glycerol kinase 1.346517 2.914219 1.0167232 578 Glycerol-3-phosphate dehydrogenase C glycerol-3-phosphate dehydrogenase 0.1696095000 27 4.752063e-04 3.904423e-03 0.1304221000 0.3493092000 1.974869e-02 C 52 27 TRUE TRUE 471 4.6825312 4.1125879 3.0925865 4.2997083 2.3456180 2.3607641 1.1783141 1.1572204 Y 2.7866030 0.9959839 30.140000 0.31333065 0.9946143 0.32818605 0.98827234 TRUE 0.5297455 0.98957564 TRUE 0.823614244 0.9959839 0.9008317 0.9896909 0 0.76423285 0.74405760 0.1847669 0.9696149 0.5271886 1.405351783 1.31196635 0.85662048 1.44494944 0.54808514 0.84418762 0.11041868 0.304469769 0.92767724 2.2891621 1423 33 37544 37545 1 122 Same + + 0.000000 3.11657764 3.1165776 1.0795206 1.465332 3.159284 1.0506515 744 Membrane carboxypeptidase (penicillin-binding protein) M penicillin-binding protein 1A 1.407189 3.088335 0.9960985 407 Uroporphyrinogen-III decarboxylase H uroporphyrinogen III decarboxylase 0.0146748000 19 3.380570e-03 -6.075044e-04 0.0010588220 -0.0796384300 3.795734e-01 0 19 40 TRUE TRUE 469 0.7068768 1.2030153 2.1942362 1.3128115 2.0569670 0.8034328 0.9468950 1.0626870 N 0.9470624 0.7890122 28.346667 0.30144612 0.6428360 0.31599735 0.43715257 FALSE 0.5004465 0.43759208 FALSE 0.285689335 0.7890122 0.4805653 0.5914417 0 0.10031606 0.09021406 0.1983866 0.5020528 0.5292930 -0.808935790 -0.28171128 0.69202154 -0.25476464 0.49378397 -0.39347557 0.06025310 -0.042078905 0.28605633 0.2282587 1423 33 37547 37548 1 146 Same + + 0.000000 -1.97064604 0.0000000 -2.0495733 1.444028 3.231905 1.0845077 1232 Protoporphyrinogen oxidase H protoporphyrinogen IX and coproporphyrinogen III oxidase 1.478038 3.082897 0.9889923 1309 Transcriptional regulator K alternate gene name: yixD~similar to transcriptional regulator (TetR/AcrR family) 0.0124201200 11 1.156687e-03 1.325881e-03 0.0649871400 0.1115099000 1.249716e-01 0 15 11 TRUE TRUE 472 0.7068768 0.4380437 0.3749267 0.6309360 1.5189177 0.7749747 1.0394374 1.1316853 N 0.9470624 0.6215516 30.640000 0.30733466 0.1867510 0.32203910 0.09246762 FALSE 0.5235422 0.10068540 FALSE 0.078122310 0.6215516 0.1480767 0.3886682 0 0.04615034 0.03614518 0.1857129 0.2926684 0.5633564 -0.798889234 -1.07838593 -0.99956616 -0.99744773 0.33217106 -0.39101092 0.20987379 0.063822256 0.14120879 0.2282587 1423 33 37652 37653 1 207 Same + + 0.000000 -0.60157999 0.0000000 -0.6015800 1.441377 3.422119 1.0426188 477 Permeases of the major facilitator superfamily GEPR similar to multidrug resistance protein 1.496953 3.325791 1.0637653 2 Acetylglutamate semialdehyde dehydrogenase E N-acetylglutamate gamma-semialdehyde dehydrogenase 0.0053421900 1 3.088723e-03 1.562601e-03 0.0797061500 0.1221043000 2.691977e-01 1 50 TRUE TRUE 469 0.7068768 0.4620894 0.4434357 0.6309360 0.6869968 0.6985410 1.0461587 1.1078388 U 0.8425356 0.6146385 34.700000 0.20419657 0.1625815 0.21550162 0.04745237 FALSE 0.5106262 0.04941130 FALSE 0.039942121 0.6146385 0.1344929 0.3817326 0 0.07139120 0.05217129 0.1926622 0.3699274 0.5827636 -0.821682727 -0.99944212 -0.94513107 -1.01269713 -0.64076060 -0.56771518 0.21777370 -0.013630632 0.18742374 0.4932813 1423 33 37659 37660 1 86 Same + + 0.000000 -1.10015681 0.6069260 -1.1001568 1.434618 3.160651 1.0475588 78 Ornithine carbamoyltransferase E ornithine carbamoyltransferase 1.547510 3.311720 1.0579426 - - - yjzC 0.0086999210 3 1.274455e-02 1.744586e-03 0.1189993000 0.0965328000 6.289998e-01 60 3 TRUE TRUE 476 0.7068768 0.4524050 0.4225152 0.4157343 0.7788880 0.7363241 1.0309093 0.9673148 U 0.8425356 0.6124381 24.320000 0.30873546 0.1547739 0.32347562 0.07560083 FALSE 0.4947641 0.07415008 FALSE 0.061431937 0.6124381 0.1301715 0.3795448 0 0.07839630 0.07420119 0.2755844 0.3464731 0.5148802 -0.819095770 -1.05618733 -0.94088215 -0.70675841 -0.32452253 -0.47869216 0.23266901 -0.115781209 0.17401927 0.4700036 1423 33 37669 37670 1 192 Same + + 0.000000 -1.18313610 0.0000000 -1.1831361 1.497077 3.226910 1.0384708 5504 Predicted Zn-dependent protease O yjaZ 1.441240 3.202465 1.0672978 444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component EP oligopeptide ABC transporter (ATP-binding protein) 0.0179320700 1 3.117688e-03 1.554777e-03 0.0438836800 0.1214301000 2.727414e-01 1 20 TRUE TRUE 482 0.7068768 0.4488664 0.4079109 0.6309360 0.6869968 0.8534714 1.0460204 1.1067758 U 0.8425356 0.6107425 33.893333 0.23192422 0.1487192 0.24429314 0.05010836 FALSE 0.5103671 0.05211968 FALSE 0.043722933 0.6107425 0.1268423 0.3778654 0 0.06352221 0.04839197 0.1884790 0.3571310 0.5715268 -0.795979107 -1.03758817 -0.95870392 -0.99725973 -0.59657556 -0.30612870 0.21324973 -0.022949403 0.17962424 0.4900225 1423 33 37674 37675 1 206 Same + + 0.000000 -1.70708281 0.0000000 -1.7070828 1.464756 3.418587 1.1105453 1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components EP oligopeptide ABC transporter (permease) 1.423919 2.933400 0.9930423 - - - yjbA 0.0058657980 3 1.667681e-03 1.349674e-04 0.0194405600 -0.0046844050 1.928049e-01 30 3 TRUE TRUE 487 0.7068768 0.4413845 0.3844109 0.6309360 0.7788880 0.7060545 1.0008850 1.1278225 U 0.8425356 0.6080957 34.633333 0.20655811 0.1392003 0.21795810 0.04039769 FALSE 0.5090049 0.04181752 FALSE 0.036030217 0.6080957 0.1216468 0.3752549 0 0.06096407 0.04591187 0.1897376 0.3382919 0.5743113 -0.798373500 -1.05802512 -0.97388293 -0.98660412 -0.31846908 -0.54333340 0.19635412 0.024397112 0.17046768 0.4519851 1423 33 37681 37682 1 116 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.380175 3.000790 1.0039913 4608 ABC-type oligopeptide transport system, ATPase component E oligopeptide ABC transporter (ATP-binding protein) 1.453490 3.560038 1.1537113 477 Permeases of the major facilitator superfamily GEPR similar to hypothetical proteins from B. subtilis 0.0057550970 2 5.375065e-03 -1.327665e-03 -0.0131924300 -0.1292578000 5.355692e-01 14 2 TRUE TRUE 492 0.7068768 0.7004818 0.7887573 0.6309360 0.7397029 0.7046100 0.9062496 1.0026558 U 0.8425356 0.6465615 27.806667 0.29891608 0.2698738 0.31339997 0.13613994 FALSE 0.4871129 0.13018914 FALSE 0.090528751 0.6465615 0.1973134 0.4145726 0 0.07707405 0.08045399 0.2016513 0.4620577 0.4883552 -0.805290959 -0.73038572 -0.60157514 -0.99104957 -0.45482693 -0.54750183 -0.07594011 -0.093853765 0.25727332 0.4700036 1423 33 37826 37827 1 129 Same + + 0.000000 0.00000000 0.0000000 -0.5002435 1.494350 3.405534 1.0781308 345 Pyrroline-5-carboxylate reductase E alternate gene name: yzcA~similar to pyrroline-5-carboxylate reductase 1.494448 3.385744 1.0848488 2362 D-aminopeptidase E dipeptide ABC transporter 0.0276547000 1 9.597984e-09 5.410145e-03 0.1594086000 0.4608009000 2.364518e-07 E 1 10 TRUE TRUE 547 0.7068768 0.4705356 0.7887573 0.6309360 0.6869968 1.0281003 1.2404378 1.1589684 Y 2.7866030 0.8569440 29.080000 0.31043552 0.7770295 0.32521866 0.61072356 TRUE 0.5575823 0.66412032 TRUE 0.477912347 0.8569440 0.6173511 0.6986934 0 0.18884751 0.16914968 0.1868960 0.6945014 0.5334872 -0.829015431 -1.01416642 -0.61633430 -1.03209371 -0.63305176 -0.12209251 0.06027987 0.600329612 0.46969747 2.2958961 1423 33 37831 37832 1 341 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.411563 2.940520 0.9803477 4166 ABC-type oligopeptide transport system, periplasmic component E dipeptide ABC transporter (dipeptide-binding protein) 1.472795 3.295884 1.0573421 1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF V similar to immunity to bacteriotoxins 0.0066872490 2 3.749413e-03 -4.822108e-04 0.0188039800 -0.0718981900 4.163748e-01 0 16 2 TRUE TRUE 552 0.7068768 0.7004818 0.7887573 0.6309360 0.7397029 0.7142536 0.9532551 1.0479422 N 0.9470624 0.6604288 38.026667 0.09051693 0.3132497 0.09628980 0.04342559 FALSE 0.4981057 0.04311193 FALSE 0.027826789 0.6604288 0.2246766 0.4295108 0 0.07839482 0.07149008 0.2195423 0.4050936 0.5248952 -0.818558782 -0.73252924 -0.61517228 -1.00943618 -0.48846700 -0.53339825 0.06286887 -0.071912593 0.21489182 0.2076394 1423 33 37904 37905 1 383 Same - - 0.000000 -0.52394671 0.0000000 -1.4941939 1.387540 3.143128 1.0719174 1291 Flagellar motor component N motility protein A 1.345118 2.919489 1.0001398 542 ATPases with chaperone activity, ATP-binding subunit O ATP-dependent Clp protease-like 0.0092212440 11 1.799660e-03 2.522081e-03 0.1015697000 0.2494704000 9.206865e-02 0 11 11 FALSE TRUE 571 0.7068768 0.4430186 0.4638075 0.6309360 1.5189177 0.7410042 1.1174118 1.1411698 N 0.9470624 0.6325030 38.566667 0.07567165 0.2239581 0.08058161 0.02308061 FALSE 0.5062304 0.02364930 FALSE 0.016855596 0.6325030 0.1696187 0.3998517 0 0.05350004 0.04636133 0.2253339 0.2930032 0.5376114 -0.795235606 -1.03812333 -0.86571993 -0.98296682 0.33695393 -0.46559734 0.14112590 0.115638851 0.14319902 0.2076394 1423 33 37924 37925 1 98 Same + + 0.000000 -1.82495269 1.6127253 -2.9456539 1.317823 3.030610 1.0653954 1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific G phosphotransferase system (PTS) glucose-specific enzyme IIABC component 1.175695 2.640445 0.9465550 1925 Phosphotransferase system, HPr-related proteins G histidine-containing phosphocarrier protein of the phosphotransferase system (PTS) (HPr protein) 0.1272115000 13 2.020042e-02 2.525599e-02 0.8257669000 0.7859123000 3.936071e-02 G 13 24 TRUE TRUE 585 0.7068768 0.4352406 0.3805392 0.7392160 1.6938099 2.1594465 1.3663421 1.1532424 Y 2.7866030 0.8288639 25.593333 0.29947846 0.7242265 0.31397741 0.52890320 TRUE 0.6091674 0.63634975 TRUE 0.459571123 0.8288639 0.5606744 0.6521592 0 0.23829707 0.21391774 0.2349810 0.6945619 0.5348015 -0.806397170 -1.09384253 -0.96842209 -0.48461892 0.38221716 0.75765150 0.04252930 0.185928429 0.46976843 2.2958961 1423 33 37926 37927 1 91 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.242762 2.713086 0.9486692 1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) G phosphotransferase system (PTS) enzyme I 1.350420 2.796063 0.9859180 - - - transcriptional regulator 0.0000000000 0 1.159019e-02 1.254158e-02 0.2514702000 0.6084139000 9.624627e-02 38 0 TRUE TRUE 587 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.3100736 1.1402369 U 0.8425356 0.6465615 24.840000 0.30530189 0.2698738 0.31995400 0.13974146 FALSE 0.5684405 0.17625229 FALSE 0.124569030 0.6465615 0.1973134 0.4145726 0 0.11597383 0.10386806 0.2506220 0.4650310 0.5309215 -0.815674974 -0.72174198 -0.59759991 -1.00760123 -0.87913349 -0.62651103 0.05705388 0.096067645 0.25737277 0.4932813 1423 33 38047 38048 1 126 Same + + 0.000000 5.06270343 5.0627034 4.9756921 1.420988 3.021224 1.0298045 4365 Uncharacterized protein conserved in bacteria S yllA 1.396728 2.937148 0.9561367 2001 Uncharacterized protein conserved in bacteria S similar to hypothetical proteins 0.0245815500 6 5.885657e-04 -3.446673e-06 0.0242193500 0.0129590300 5.911294e-02 6 35 TRUE TRUE 646 0.7068768 2.2408824 2.5117473 1.7969308 0.9914208 0.9666645 1.0084882 1.1484321 U 0.8425356 0.7713977 28.766667 0.30640727 0.6041814 0.32108791 0.40274244 FALSE 0.5225288 0.42461045 FALSE 0.279577389 0.7713977 0.4452788 0.5663974 0 0.31486286 0.26069781 0.1942156 0.7858462 0.5658314 -0.806442962 0.35018925 0.76312604 0.13584479 0.03120539 -0.17955579 0.19911018 0.158464834 0.59399436 0.4932813 1423 33 38051 38052 1 117 Same + + 0.000000 3.11657764 3.1165776 3.1165776 1.382232 2.917532 1.0073633 768 Cell division protein FtsI/penicillin-binding protein 2 M penicillin-binding protein 2B 1.426631 3.130996 1.0755996 768 Cell division protein FtsI/penicillin-binding protein 2 M penicillin-binding protein 0.0424415700 13 1.971251e-03 -2.234128e-04 0.0118997000 -0.0075945350 1.889808e-01 M 13 40 TRUE TRUE 650 0.7068768 1.8806907 2.1942362 1.3128115 1.6938099 1.2919695 0.9994964 1.1281050 Y 2.7866030 0.9053492 27.933333 0.29891749 0.8603624 0.31340143 0.72429066 TRUE 0.5090459 0.73145812 TRUE 0.526472458 0.9053492 0.7155023 0.7873580 0 0.57777309 0.50301064 0.1998590 0.9097527 0.5748325 -0.798656490 0.04998021 0.67871363 -0.24686964 0.38140121 0.14537801 0.17566133 0.026523882 0.80205981 2.2958961 1423 33 38062 38063 1 174 Same + + 0.000000 0.60692601 0.6069260 0.6069260 1.530809 3.673103 1.1189749 3856 Uncharacterized conserved protein (small basic protein) S small basic protein 1.376430 3.030411 1.0325801 849 Actin-like ATPase involved in cell division D cell-division protein 0.0094594150 1 2.383304e-02 -4.884103e-03 -0.1347973000 -0.3963741000 1.742939e+00 1 37 TRUE TRUE 661 0.7068768 1.0727963 1.2353007 0.4157343 0.6869968 0.7435977 0.7429608 0.7175618 U 0.8425356 0.6831195 32.880000 0.26382554 0.3804267 0.27728161 0.18035906 FALSE 0.3922270 0.12434880 FALSE 0.078633761 0.6831195 0.2695481 0.4548960 0 0.06860125 0.10107595 0.1833687 0.5547207 0.3957871 -0.808409690 -0.42670756 -0.11187731 -0.70806678 -0.62603193 -0.46835482 -0.51105009 -0.223118029 0.33366884 0.4700036 1423 33 38064 38065 1 302 Same + + 0.000000 -0.52394671 0.0000000 -0.5239467 1.288050 2.905922 1.0274810 206 Cell division GTPase D cell-division initiation protein 1.378409 3.004736 1.0678854 4412 Uncharacterized protein conserved in bacteria S bacillopeptidase F 0.0067812100 1 8.164592e-03 5.635348e-03 0.1127083000 0.3938279000 1.843588e-01 45 1 TRUE TRUE 663 0.7068768 0.4684161 0.4638075 0.6309360 0.6869968 0.7150993 1.2019069 1.1283079 U 0.8425356 0.6169269 37.193333 0.11613757 0.1706421 0.12332287 0.02632370 FALSE 0.5116788 0.02754814 FALSE 0.021742131 0.6169269 0.1389882 0.3840180 0 0.06897358 0.05978929 0.2092831 0.3794894 0.5381043 -0.799341970 -0.96929720 -0.85021821 -0.98638853 -0.61511063 -0.51738018 0.09232534 0.027236131 0.19371875 0.4932813 1423 33 38081 38082 1 274 Same + + 8.160891 5.88147683 33.2590723 31.8761522 1.392218 3.067081 1.0378860 564 Pseudouridylate synthases, 23S RNA-specific J alternate gene name: ylmL~similar to hypothetical proteins 1.317061 2.930298 0.9644212 2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase F transcriptional attenuator and uracil phosphoribosyltransferase activity (minor) 0.0759861600 32 5.648645e-03 2.971023e-03 0.1305694000 0.2637087000 2.156499e-01 0 47 32 TRUE TRUE 680 3.5641894 3.5658247 2.6844120 3.5670358 2.4641549 1.7673966 1.1267878 1.1247624 N 0.9470624 0.9683103 36.780000 0.12986428 0.9562884 0.13776646 0.76553819 TRUE 0.5126740 0.77451672 TRUE 0.459356460 0.9683103 0.8440293 0.9220484 0 0.38033618 0.33184266 0.2061725 0.8279428 0.5527384 0.887868817 1.06236126 0.80940744 1.17885467 0.55928396 0.51168054 0.14652713 0.002567807 0.65662510 0.2282587 1423 33 38091 38092 1 412 Same + + 0.000000 -3.10769723 0.0000000 -3.3783898 1.356380 3.020495 1.0237159 461 Orotate phosphoribosyltransferase F orotate phosphoribosyltransferase 1.304604 2.800183 0.9452534 175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related e EH phosphoadenosine phosphosulfate 0.0012157800 21 2.680733e-03 7.493458e-03 0.2431291000 0.5024192000 5.223220e-02 21 22 TRUE TRUE 690 0.7068768 0.4344621 0.3622163 0.6309360 2.1534488 0.6519498 1.2621523 1.1500500 U 0.8425356 0.6055830 38.880000 0.06777475 0.1300869 0.07221236 0.01075495 FALSE 0.5551152 0.01338408 FALSE 0.011845086 0.6055830 0.1167161 0.3727891 0 0.06801137 0.05865664 0.2358470 0.3368875 0.5394084 -0.798889219 -1.08902950 -1.00438283 -0.98691093 0.50274046 -0.60936967 0.07539460 0.186556349 0.16797847 0.4932813 1423 33 38148 38149 1 68 Same + + 5.167051 5.77850234 11.8779302 11.7278572 1.297348 2.853294 0.9957056 1206 NAD(FAD)-utilizing enzyme possibly involved in translation J glucose-inhibited division protein 1.471336 3.212278 1.0169129 4974 Site-specific recombinase XerD L integrase/recombinase 0.0056992280 20 3.027194e-02 -6.235503e-03 -0.1775597000 -0.4172557000 1.803806e+00 0 27 20 TRUE TRUE 741 3.2168622 2.9258729 2.6372267 2.7194884 2.1081067 0.7036008 0.7345048 0.7091590 N 0.9470624 0.9624244 21.440000 0.38050205 0.9478525 0.39670228 0.91779099 TRUE 0.3868779 0.87569173 TRUE 0.657415432 0.9624244 0.8319723 0.9083828 0 0.38537335 0.47854341 0.4257663 0.7548535 0.4059042 0.618901997 0.78124519 0.82251050 0.79648606 0.49528741 -0.55065749 -0.52602561 -0.227064441 0.55311554 0.2282587 1423 33 38152 38153 1 380 Same + + 1.757858 0.32071627 3.2617103 0.8175902 1.348360 3.000303 1.0234031 4465 Pleiotropic transcriptional repressor K transcriptional regulator 1.368640 2.938550 0.9322639 1815 Flagellar basal body protein N flagellar basal-body rod protein 0.0112779300 15 4.112751e-04 3.784113e-03 0.1098536000 0.3394363000 1.673038e-02 0 15 24 TRUE TRUE 745 2.3069130 1.1299610 1.1937679 1.4237379 1.8515435 0.7634028 1.1717708 1.1576515 N 0.9470624 0.8903850 38.473333 0.07812802 0.8355682 0.08318303 0.30102077 FALSE 0.5286651 0.32570943 FALSE 0.171367090 0.8903850 0.6850983 0.7587113 0 0.09280591 0.08144729 0.2234747 0.4339110 0.5356885 0.014682244 -0.36849686 -0.18958122 -0.17261722 0.45248064 -0.42813064 0.10776827 0.326671450 0.23553578 0.2282587 1423 33 38155 38156 1 46 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.308669 2.916803 0.9636842 1677 Flagellar hook-basal body protein NU flagellar hook-basal body protein 1.318133 2.814987 0.9969283 1766 Flagellar biosynthesis/type III secretory pathway lipoprotein NU flagellar basal-body M-ring protein 0.0000000000 0 8.956979e-05 1.152175e-02 0.3074498000 0.6517169000 9.685065e-04 0 8 TRUE TRUE 748 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.3284565 1.1597797 U 0.8425356 0.6465615 18.826667 0.54436200 0.2698738 0.56121854 0.30632713 FALSE 0.5932026 0.39171087 FALSE 0.299845277 0.6465615 0.1973134 0.4145726 0 0.38525289 0.34743935 0.6062256 0.4653154 0.5406608 -0.798889219 -0.72021635 -0.61259635 -0.98691093 -0.88103160 -0.63552434 0.05480800 0.506441607 0.25696789 0.4932813 1423 33 38164 38165 1 40 Same + + 0.000000 1.50385237 1.5038524 0.7181730 1.283386 2.916033 1.0119181 4786 Flagellar basal body rod protein N flagellar hook protein 1.478402 2.997864 0.9679514 1582 Uncharacterized protein, possibly involved in motility N Uncharacterized conserved protein, possibly involved in motility 0.1127190000 7 3.803122e-02 -7.911736e-03 -0.2295380000 -0.4941759000 2.085717e+00 N 25 7 TRUE TRUE 757 0.7068768 1.1070623 1.4783871 0.6116240 1.0944473 2.0822930 0.7105087 0.6819717 Y 2.7866030 0.8840245 18.140000 0.59737152 0.8247751 0.61365877 0.87474331 TRUE 0.3653510 0.80080792 TRUE 0.636551057 0.8840245 0.6721917 0.7468823 0 0.72007478 0.79296568 0.6517388 0.8374031 0.4017779 -0.808935790 -0.41408660 0.22420162 -0.53706838 0.11139237 0.68929055 -0.59990184 -0.226152681 0.67177067 2.2958961 1423 33 38165 38166 1 -3 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.478402 2.997864 0.9679514 1582 Uncharacterized protein, possibly involved in motility N Uncharacterized conserved protein, possibly involved in motility 1.395635 2.891445 0.9874736 1580 Flagellar basal body-associated protein N flagellar protein 0.0000000000 0 6.850366e-03 -1.451004e-03 -0.0232286500 -0.1664407000 7.324330e-01 N 7 0 TRUE TRUE 758 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.8765381 0.9348549 Y 2.7866030 0.8510763 4.526667 0.81921732 0.7662836 0.82909782 0.93693792 TRUE 0.4766248 0.93117809 TRUE 0.863643388 0.8510763 0.6054919 0.6886927 0 0.88545526 0.90883219 0.8614919 0.8007974 0.4367600 -0.816445857 -0.73069757 -0.62231027 -1.01419987 -0.87723809 -0.63524818 -0.20815635 -0.153139967 0.61579120 2.3581549 1423 33 38167 38168 1 -10 Same + + 5.130068 1.50385237 8.4256796 8.3386682 1.481731 3.219911 1.0376261 1868 Flagellar motor switch protein N flagellar motor switch protein 1.353400 3.033668 1.0461918 1776 Chemotaxis protein CheC, inhibitor of MCP methylation NT flagellar motor switch protein 0.1324087000 7 1.646899e-02 -4.106492e-03 -0.0788222200 -0.3640701000 1.457794e+00 21 7 TRUE TRUE 760 3.1982462 2.6326583 1.4783871 2.3323466 1.0944473 2.1907536 0.7580579 0.7544191 U 0.8425356 0.9310475 1.826667 0.80588207 0.9010827 0.81632799 0.97423874 TRUE 0.4115766 0.96357283 TRUE 0.905697421 0.9310475 0.7678439 0.8394093 0 0.83279256 0.87850454 0.8309843 0.7853509 0.4078659 0.583892252 0.57028051 0.21713584 0.46373273 0.11188261 0.77976515 -0.46611059 -0.209437948 0.59525320 0.4788926 1423 33 38194 38195 1 330 Same + + 6.834816 6.67542871 16.2343809 15.1111542 1.357113 2.915632 1.0414214 2176 DNA polymerase III, alpha subunit (gram-positive type) L DNA polymerase III (alpha subunit) 1.367599 2.873490 1.0017032 779 Uncharacterized protein conserved in bacteria S alternate gene name: ymxA~similar to hypothetical proteins 0.1151746000 23 1.099564e-04 3.393437e-03 0.1042686000 0.3179315000 4.245728e-03 23 29 TRUE TRUE 787 3.4195782 3.1056527 3.0925865 2.9680644 2.2214112 2.0978604 1.1574506 1.1592513 U 0.8425356 0.9722079 37.833333 0.09618732 0.9618182 0.10228115 0.72832527 TRUE 0.5269645 0.74915394 TRUE 0.405681680 0.9722079 0.8520178 0.9312317 0 0.31642562 0.28955119 0.2160530 0.7876498 0.5317864 0.710147239 0.81273645 0.86128023 0.90962202 0.52316791 0.70098729 0.13533277 0.410333503 0.59658423 0.4663739 1423 33 38201 38202 1 82 Same + + 35.938066 5.88147683 69.7108601 68.4689849 1.415351 3.077185 1.0393706 858 Ribosome-binding factor A J ribosome-binding factor A 1.454037 3.137575 1.0284760 130 Pseudouridine synthase J tRNA pseudouridine 55 synthase 0.0080607700 42 1.496608e-03 -1.823688e-04 0.0212997900 -0.0326120800 1.692323e-01 J 42 53 TRUE TRUE 794 4.7598947 4.2646079 2.6844120 4.4663306 2.6727323 0.7292187 0.9828372 1.1286687 Y 2.7866030 0.9951571 23.720000 0.31283341 0.9935001 0.32767648 0.98583257 TRUE 0.5087946 0.98631564 TRUE 0.807817619 0.9951571 0.8991318 0.9875847 0 0.89374592 0.86040916 0.2837842 0.9753680 0.5771039 1.446003682 1.45586725 0.83993153 1.51622394 0.61894184 -0.51440183 0.15357420 0.046008113 0.93959970 2.2958961 1423 33 38208 38209 1 186 Same + + 0.000000 3.11657764 3.1165776 3.1165776 1.611972 3.505193 1.0468701 1873 Uncharacterized conserved protein S similar to hypothetical proteins 1.515038 3.429155 1.0961009 686 Alanine dehydrogenase E dipicolinate synthase subunit A 0.1392617000 3 9.396249e-03 1.800269e-02 0.3867073000 0.7785330000 3.254546e-02 4 3 TRUE TRUE 801 0.7068768 1.8806907 2.1942362 1.3128115 0.7788880 2.2354766 1.3649461 1.1549625 U 0.8425356 0.7538064 33.540000 0.24343232 0.5637747 0.25621025 0.29370497 FALSE 0.6086618 0.39275018 FALSE 0.258120261 0.7538064 0.4101128 0.5423891 0 0.18724000 0.16328096 0.1874218 0.6804110 0.5413978 -0.798931080 0.02336422 0.66492554 -0.26032356 -0.31738697 0.78472189 0.04053060 0.240478822 0.45830568 0.4754237 1423 33 38213 38214 1 298 Same + + 1.049822 -2.12622131 1.9821990 -0.1440223 1.325564 3.030116 1.0258277 329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase EM dihydrodipicolinate synthase 1.335535 2.996782 1.0536733 595 Predicted hydrolase of the metallo-beta-lactamase superfamily R similar to hypothetical proteins 0.0066720490 3 9.943426e-05 8.128454e-03 0.2222853000 0.5496911000 2.270883e-03 63 3 TRUE TRUE 806 2.0062463 0.4827210 0.3696080 0.8882204 0.7788880 0.7140418 1.2844568 1.1596680 U 0.8425356 0.8142808 37.126667 0.11831083 0.6953672 0.12561147 0.23447884 FALSE 0.5746498 0.29269236 FALSE 0.170476892 0.8142808 0.5313153 0.6292536 0 0.05360600 0.04792260 0.2066482 0.3297091 0.5294811 -0.081752273 -0.94672309 -1.01091087 -0.42518388 -0.31589764 -0.54294368 0.02417127 0.430071350 0.16194729 0.4843924 1423 33 38239 38240 1 133 Same + + 0.000000 2.21965128 2.2196513 2.2196513 1.412717 2.854970 0.9629234 - - - morphogenic protein 1.388096 2.975948 1.0206464 249 Mismatch repair ATPase (MutS family) L mutS 0.0124828500 2 6.061955e-04 2.661850e-04 0.0324556300 0.0477741900 5.539025e-02 2 47 TRUE TRUE 832 0.7068768 1.6218247 1.8173131 0.9932597 0.7397029 0.7753076 1.0192405 1.1493885 U 0.8425356 0.7249379 29.426667 0.31401630 0.4932147 0.32888864 0.30819920 FALSE 0.5236152 0.32871102 FALSE 0.215063304 0.7249379 0.3525629 0.5050088 0 0.17274139 0.14057747 0.1886157 0.6364362 0.5607435 -0.818558790 -0.12798243 0.39131808 -0.41210534 -0.47685421 -0.39922419 0.23963825 0.179496243 0.41302563 0.4700036 1423 33 38273 38274 1 243 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.278981 2.582880 0.9453340 - - - ymzA 1.406596 3.070431 0.9797587 1780 Protein involved in ribonucleotide reduction F similar to ribonucleoprotein 0.0000000000 0 1.628557e-02 2.021372e-03 0.0076545310 0.1715262000 4.971398e-01 0 7 TRUE TRUE 850 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0733797 1.0156652 U 0.8425356 0.6465615 35.880000 0.16142628 0.2698738 0.17087185 0.06642693 FALSE 0.5052360 0.06773767 FALSE 0.046094096 0.6465615 0.1973134 0.4145726 0 0.09166753 0.07497792 0.2002886 0.4480462 0.5545771 -0.837201206 -0.75627150 -0.62984832 -1.04961369 -0.91805576 -0.68073147 0.17768475 -0.096177359 0.24450596 0.4663739 1423 33 38281 38282 1 111 Same + + 1.049822 6.06850270 8.0507017 8.0507017 1.384736 3.085767 1.0473345 4100 Cystathionine beta-lyase family protein involved in aluminum resistance P similar to hypothetical proteins 1.434228 3.081864 0.9715733 789 Predicted transcriptional regulators K transcriptional regulator 0.0230825600 13 2.449518e-03 -4.832640e-04 0.0064187470 -0.0415031400 2.508517e-01 0 14 13 TRUE TRUE 856 2.0062463 2.6156223 2.7563385 2.3064012 1.6938099 0.9514856 0.9749116 1.1160339 N 0.9470624 0.9158784 27.180000 0.30148596 0.8773229 0.31603825 0.75530101 TRUE 0.5055931 0.75941241 TRUE 0.552853205 0.9158784 0.7369283 0.8082328 0 0.28275679 0.24195273 0.2067928 0.7522207 0.5525986 -0.139128191 0.57543241 0.83201114 0.44174096 0.38501714 -0.21444648 0.09889970 0.003067643 0.55041903 0.2076394 1423 33 38283 38284 1 328 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.255431 2.719301 0.9288810 174 Glutamine synthetase E glutamine synthetase 1.538207 3.671259 1.0986280 - - - alternate gene name: ynaA 0.0000000000 0 7.996223e-02 -1.941333e-02 -0.5142077000 -0.8237876000 3.298555e+00 57 0 TRUE TRUE 858 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.6454783 0.6163804 U 0.8425356 0.6465615 37.780000 0.09778227 0.2698738 0.10396553 0.03851707 FALSE 0.3100426 0.01768326 FALSE 0.011830141 0.6465615 0.1973134 0.4145726 0 0.06090782 0.08449774 0.2137776 0.4655954 0.4127026 -0.829015431 -0.73684980 -0.61633430 -1.03209371 -0.90461606 -0.69335374 -0.62204070 -0.238687891 0.25342194 0.5078801 1423 33 38366 38367 1 111 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.402954 3.192195 1.0459431 - - - yngL 1.404190 3.070279 1.0763144 3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases Q peptide synthetase 0.0000000000 0 1.528786e-06 2.979713e-04 0.0297867500 0.0499522700 3.237025e-04 0 0 TRUE FALSE 879 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0196163 1.1596026 U 0.8425356 0.6465615 27.180000 0.30148596 0.2698738 0.31603825 0.13758502 FALSE 0.5123546 0.14355572 FALSE 0.100292899 0.6465615 0.1973134 0.4145726 0 0.10000452 0.08307799 0.2107892 0.4605220 0.5508408 -0.808935789 -0.73090361 -0.59882994 -1.00724979 -0.88135140 -0.64444120 0.21690526 0.560862653 0.25330397 0.4754237 1423 33 38371 38372 1 383 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.456111 3.258696 1.1331180 1020 Non-ribosomal peptide synthetase modules and related proteins Q peptide synthetase 1.461701 3.312929 1.1267591 2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) M penicillin-binding protein 0.0000000000 0 3.124842e-05 1.440852e-03 0.0602622300 0.1291362000 4.182595e-03 0 0 13 TRUE FALSE 874 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0508940 1.1592747 N 0.9470624 0.6604288 38.566667 0.07567165 0.3132497 0.08058161 0.03599786 FALSE 0.5066249 0.03692890 FALSE 0.023781442 0.6604288 0.2246766 0.4295108 0 0.08842952 0.07672544 0.2310128 0.4104113 0.5386056 -0.819095770 -0.73749190 -0.61468612 -1.01729560 -0.87794161 -0.67200091 0.21322534 0.399259619 0.21668471 0.2282587 1423 33 38475 38476 1 228 Same - - 0.000000 1.85176825 3.5588511 1.8517682 1.424672 3.160683 1.0813979 567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes C 2-oxoglutarate dehydrogenase (E1 subunit) 1.449364 3.072144 1.0316739 4548 Nitric oxide reductase activation protein P yojO 0.0666773500 4 6.097407e-04 1.091285e-04 0.0277787000 -0.0005655335 6.793165e-02 0 23 4 TRUE FALSE 852 0.7068768 1.5012765 1.7555500 1.5106497 0.8413194 1.6501235 1.0024031 1.1466796 N 0.9470624 0.7353155 35.360000 0.18030476 0.5192173 0.19060390 0.19195187 FALSE 0.5208297 0.20521555 FALSE 0.124628535 0.7353155 0.3732279 0.5181690 0 0.14656508 0.11407180 0.1964165 0.5700028 0.5715084 -0.798889230 -0.16496636 0.36197667 -0.12442607 -0.17363556 0.43400070 0.19969563 0.133241659 0.34502859 0.2076394 1423 33 38511 38512 1 323 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.484052 3.352516 1.1069727 161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase H similar to adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1.444574 3.139812 1.0384159 454 Histone acetyltransferase HPA2 and related acetyltransferases KR alternate gene name: cgeBC 0.0000000000 0 1.558512e-03 1.499831e-03 0.0489900200 0.1253830000 1.547532e-01 10 0 TRUE FALSE 830 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0476833 1.1289095 U 0.8425356 0.6465615 37.613333 0.10284865 0.2698738 0.10931346 0.04065110 FALSE 0.5231453 0.04442200 FALSE 0.029988617 0.6465615 0.1973134 0.4145726 0 0.10892723 0.08657514 0.2154713 0.4647818 0.5632696 -0.798889237 -0.71452762 -0.58972614 -0.98670781 -0.86308769 -0.63552410 0.20428975 0.040917680 0.25655856 0.4843924 1423 33 38719 38720 1 1 Same - - 0.000000 -0.52394671 0.0000000 -0.5239467 1.372998 3.110153 1.0324170 - - - ypkP 1.397638 2.981669 0.9748121 262 Dihydrofolate reductase H dihydrofolate reductase 0.0087384810 1 6.070949e-04 1.110408e-03 0.0447125600 0.1366192000 4.230808e-02 1 39 TRUE FALSE 744 0.7068768 0.4684161 0.4638075 0.6309360 0.6869968 0.7375620 1.0552779 1.1525940 U 0.8425356 0.6169269 6.766667 0.82208414 0.1706421 0.83184012 0.48736484 FALSE 0.5095538 0.49691716 FALSE 0.436601239 0.6169269 0.1389882 0.3840180 0 0.61216148 0.57393599 0.8510534 0.3742793 0.5395370 -0.807300909 -0.98560675 -0.89851103 -1.00610045 -0.62465610 -0.47098229 0.18413862 0.192685643 0.19077858 0.4932813 1423 33 38721 38722 1 84 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.366802 2.982550 0.9905286 207 Thymidylate synthase F thymidylate synthase B 1.379110 2.919833 0.9228795 1267 Phosphatidylglycerophosphatase A and related proteins I similar to hypothetical proteins from B. subtilis 0.0000000000 0 1.514864e-04 2.255478e-03 0.0756064300 0.2384329000 9.176457e-03 0 30 0 TRUE FALSE 742 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.1103606 1.1584846 N 0.9470624 0.6604288 24.060000 0.31031570 0.3132497 0.32509583 0.17028426 FALSE 0.5136387 0.17813339 FALSE 0.121032001 0.6604288 0.2246766 0.4295108 0 0.11039966 0.09797905 0.2798930 0.4128818 0.5332555 -0.808935790 -0.73090361 -0.59825883 -1.00724979 -0.88402626 -0.63576325 0.12486374 0.344943673 0.21842107 0.2282587 1423 33 38743 38744 1 74 Same - - 0.000000 -0.52394671 0.0000000 -0.6162735 1.445020 3.218291 1.0818868 3424 Predicted naringenin-chalcone synthase Q naringenin-chalcone synthase 1.385756 3.318687 1.1376400 2233 Xanthine/uracil permeases F xanthine permease 0.0258843600 6 3.512239e-03 -8.482770e-04 0.0030404800 -0.0835860000 3.653296e-01 0 6 22 TRUE FALSE 732 0.7068768 0.4607340 0.4638075 0.6309360 0.9914208 0.9866228 0.9426375 1.0672156 N 0.9470624 0.6316597 22.500000 0.33536920 0.2211389 0.35073577 0.12531410 FALSE 0.5013717 0.12591675 FALSE 0.092904496 0.6316597 0.1679589 0.3989818 0 0.09719499 0.08409712 0.3415680 0.3050221 0.5397039 -0.815129717 -1.02664040 -0.88861223 -1.02452939 0.01882036 -0.16005078 0.03811669 -0.050039815 0.15038004 0.2076394 1423 33 38745 38746 1 331 Same - - 1.049822 0.82521533 3.5949243 2.6158191 1.422993 3.243074 1.0418258 503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins F xanthine phosphoribosyltransferase 1.391761 2.914794 0.9833189 2317 Zn-dependent carboxypeptidase E similar to carboxypeptidase -0.0296307400 17 9.754147e-04 -6.246615e-05 0.0235846300 0.0077890170 9.867511e-02 0 19 17 TRUE FALSE 730 2.0062463 1.7389169 1.3214404 1.5342386 1.9586683 0.9964276 1.0058151 1.1395334 N 0.9470624 0.8574901 37.860000 0.09539473 0.7780221 0.10144399 0.26986682 FALSE 0.5159356 0.28261357 FALSE 0.154111075 0.8574901 0.6184552 0.6996319 0 0.16085002 0.12767949 0.2215094 0.5641654 0.5670233 -0.136089105 -0.08304834 -0.05100549 -0.09065999 0.46296452 -0.59047359 0.21594985 0.084679408 0.33967518 0.2336149 1423 33 38790 38791 1 147 Same - - 0.000000 3.11657764 3.1165776 3.1165776 1.397211 3.312286 1.0635949 4347 Predicted membrane protein S ypjA 1.474945 3.262384 1.0460523 2010 Cytochrome c, mono- and diheme variants C menaquinol:cytochrome c oxidoreductase (cytochrome b/c subunit) 0.1134571000 3 6.042512e-03 -1.278591e-03 -0.0021711770 -0.1484277000 6.523518e-01 6 3 TRUE FALSE 699 0.7068768 1.8806907 2.1942362 1.3128115 0.7788880 2.0916224 0.8895994 0.9581923 U 0.8425356 0.7538064 30.760000 0.30587658 0.5637747 0.32054354 0.36286000 FALSE 0.4797005 0.34429435 FALSE 0.220250009 0.7538064 0.4101128 0.5423891 0 0.13493747 0.15595966 0.1813614 0.6765829 0.4577541 -0.805562240 0.02692673 0.66695685 -0.27207489 -0.32563704 0.71205661 -0.17280973 -0.133296480 0.45476108 0.4788926 1423 33 38793 38794 1 143 Same - - 0.000000 3.11657764 3.1165776 3.1165776 1.421383 3.081009 1.0200469 723 Rieske Fe-S protein C menaquinol:cytochrome c oxidoreductase (iron-sulfur subunit) 1.514781 3.356215 1.0311680 - - - ypiF 0.1050588000 3 8.723264e-03 5.050413e-05 0.0528398500 -0.0311307100 6.962691e-01 7 3 TRUE FALSE 696 0.7068768 1.8806907 2.1942362 1.3128115 0.7788880 2.0308191 0.9843867 0.9461835 U 0.8425356 0.7538064 30.273333 0.31171382 0.5637747 0.32652902 0.36920628 FALSE 0.4843188 0.35471700 FALSE 0.228224541 0.7538064 0.4101128 0.5423891 0 0.14558628 0.16149962 0.1866723 0.6786323 0.4694047 -0.808935791 0.02563826 0.66117643 -0.26469130 -0.31501036 0.66729348 0.15837170 -0.122376076 0.45627870 0.4788926 1423 33 38799 38800 1 11 Same - - 0.000000 -3.22637812 0.6069260 -11.8420636 1.364123 3.052571 1.0470435 79 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase E histidinol-phosphate aminotransferase 1.432029 3.242017 1.1013647 159 Tryptophan synthase alpha chain E tryptophan synthase (alpha subunit) 0.1424149000 53 4.611252e-03 -6.343720e-04 -0.0039166640 -0.0447113200 4.082567e-01 E 56 53 TRUE FALSE 690 0.7068768 0.4321027 0.3614099 0.4157343 2.8429227 2.2486112 0.9729041 1.0516252 Y 2.7866030 0.8274898 9.613333 0.82154417 0.7215508 0.83132369 0.92265729 TRUE 0.5009846 0.92293786 TRUE 0.853641280 0.8274898 0.5579059 0.6499655 0 0.87679353 0.86097976 0.8805790 0.6788198 0.5346838 -0.808979725 -1.12460945 -1.02085803 -0.70700387 0.60867386 0.79054904 0.12925535 -0.069024408 0.45649197 2.3025851 1423 33 38805 38806 1 216 Same - - 0.000000 0.08297929 0.6069260 -1.0239656 1.444091 3.118374 1.0550235 147 Anthranilate/para-aminobenzoate synthases component I EH anthranilate synthase 1.339169 2.901190 0.9807088 4401 Chorismate mutase E chorismate mutase (isozymes 1 and 2) 0.0431994900 10 1.100880e-02 -1.898684e-03 -0.0054035890 -0.1421590000 8.180285e-01 25 10 TRUE FALSE 684 0.7068768 0.4533824 1.1557262 0.4157343 1.4126521 1.3045272 0.8945104 0.9037782 U 0.8425356 0.7010070 34.926667 0.19608558 0.4303178 0.20705842 0.15557915 FALSE 0.4767592 0.14374509 FALSE 0.088867484 0.7010070 0.3050063 0.4757802 0 0.02994782 0.03803059 0.1913655 0.2959615 0.4384878 -0.819095770 -1.03434954 -0.27865652 -0.68731621 0.27760529 0.15211096 -0.13565928 -0.141894186 0.14314259 0.4754237 1423 33 38813 38814 1 163 Same - - 0.000000 0.60692601 0.6069260 0.6069260 1.377918 2.920366 1.0076774 - - - heptaprenyl diphosphate synthase component I 1.407036 2.911589 0.9908738 - - - tryptophan operon RNA-binding attenuation protein (TRAP) 0.0274245300 2 8.478657e-04 5.927603e-04 0.0319282700 0.0840143300 6.971757e-02 3 2 TRUE FALSE 676 0.7068768 1.0727963 1.2353007 0.4157343 0.7397029 1.0186981 1.0263672 1.1463353 U 0.8425356 0.6831195 32.166667 0.28295010 0.3804267 0.29698809 0.19503615 FALSE 0.5214078 0.20884052 FALSE 0.136920324 0.6831195 0.2695481 0.4548960 0 0.12290796 0.10177755 0.1851223 0.5585922 0.5529141 -0.795979107 -0.42611224 -0.16369690 -0.68427483 -0.46364695 -0.10986433 0.22938173 0.151302748 0.33278697 0.4900225 1423 33 38815 38816 1 188 Same - - 1.049822 0.82521533 3.5949243 -2.2305514 1.286473 2.821986 0.9742178 302 GTP cyclohydrolase I H GTP cyclohydrolase I 1.159417 2.520637 0.8951177 776 Bacterial nucleoid DNA-binding protein L non-specific DNA-binding protein HBsu 0.0248677200 43 1.614310e-02 3.512864e-02 1.0784430000 0.8752421000 1.294715e-02 0 43 43 TRUE FALSE 674 2.0062463 0.4370272 1.3214404 1.5342386 2.6933288 0.9703225 1.3936178 1.1581095 N 0.9470624 0.8870634 33.646667 0.24000136 0.8299510 0.25265934 0.60649628 TRUE 0.6245223 0.71938155 TRUE 0.525564386 0.8870634 0.6783569 0.7525087 0 0.02141498 0.01849459 0.1854606 0.1707349 0.5373285 -0.128898519 -1.09732448 -0.04976868 -0.09059785 0.61327404 -0.17995886 0.01520747 0.341126309 0.07643301 0.2076394 1423 33 38865 38866 1 -18 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.427558 3.180348 1.0652109 1985 Pyrimidine reductase, riboflavin biosynthesis H riboflavin-specific deaminase 1.596100 3.408076 1.0677990 - - - ypuE 0.0000000000 0 2.840665e-02 1.176407e-03 0.1536305000 0.0275749500 8.853286e-01 40 0 TRUE FALSE 630 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0154676 0.8858459 U 0.8425356 0.6465615 0.920000 0.79885224 0.2698738 0.80958707 0.59480700 TRUE 0.4774315 0.57286210 TRUE 0.471438550 0.6465615 0.1973134 0.4145726 0 0.56725229 0.61614309 0.8286525 0.4551035 0.4495324 -0.819095770 -0.73675721 -0.60335007 -1.01386337 -0.92634269 -0.68430411 0.22579868 -0.147079866 0.24919735 0.4754237 1423 33 38877 38878 1 -49 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.460111 3.309129 1.0862366 - - - mutants lead to the production of immature spores (stage V sporulation) 1.478829 3.400367 1.0814627 - - - mutants lead to the production of immature spores (stage V sporulation) 0.0000000000 0 3.503631e-04 2.276811e-03 0.0860440600 0.2110625000 3.468487e-02 4 0 TRUE FALSE 624 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0921715 1.1543728 U 0.8425356 0.6465615 0.220000 0.79247612 0.2698738 0.80346752 0.58532040 TRUE 0.5077241 0.59279988 TRUE 0.491911634 0.6465615 0.1973134 0.4145726 0 0.66356149 0.63206746 0.8321253 0.4650310 0.5344726 -0.815674974 -0.72174198 -0.59759991 -1.00760123 -0.87913349 -0.62651103 0.16619170 0.224528505 0.25737277 0.4932813 1423 33 38882 38883 1 122 Same - - 0.000000 2.50965164 2.5096516 2.5096516 1.567753 3.534127 1.0484027 - - - mutants lead to the production of immature spores (stage V sporulation) 1.475668 3.140756 1.0140777 1191 DNA-directed RNA polymerase specialized sigma subunit K RNA polymerase sporulation-specific sigma factor (sigma-F) 0.0726415800 2 8.479679e-03 8.053966e-03 0.1648324000 0.5007602000 1.692323e-01 2 6 TRUE FALSE 619 0.7068768 1.7039305 1.9745722 1.1291750 0.7397029 1.7284584 1.2612716 1.1286687 U 0.8425356 0.7382597 28.346667 0.30144612 0.5264614 0.31599735 0.32421320 FALSE 0.5304335 0.35146827 FALSE 0.229360595 0.7382597 0.3790955 0.5219584 0 0.16967033 0.15054879 0.1958641 0.6441552 0.5355245 -0.808715376 -0.07635557 0.52369624 -0.33856944 -0.46676218 0.49683526 0.06260567 0.031942553 0.42117401 0.4610350 1423 33 38894 38895 1 141 Same - - 0.000000 -1.18313610 0.0000000 -2.1492925 1.379641 3.331223 1.1457483 1757 Na+/H+ antiporter C similar to Na+/H+ antiporter 1.324282 2.918784 1.0156890 1027 Aspartate ammonia-lyase E L-aspartase 0.0033947980 9 3.064556e-03 3.978808e-03 0.1483957000 0.3379153000 1.096571e-01 0 9 25 TRUE FALSE 607 0.7068768 0.4374252 0.4079109 0.6309360 1.3149848 0.6728808 1.1701526 1.1362612 N 0.9470624 0.6257490 30.140000 0.31333065 0.2011657 0.32818605 0.10306547 FALSE 0.5134609 0.10815162 FALSE 0.081920901 0.6257490 0.1563300 0.3929258 0 0.04169218 0.03647033 0.1829424 0.3032823 0.5347560 -0.822284082 -1.07724757 -0.98468049 -1.00994889 0.26997671 -0.61688513 0.12494505 0.094784093 0.14460396 0.2282587 1423 33 38949 38950 1 18 Same - - 15.512484 3.11657764 40.6752635 39.7694711 1.549698 3.507663 1.1019265 2513 PEP phosphonomutase and related enzymes G similar to phosphoenolpyruvate mutase 1.411119 3.151721 1.0708032 2079 Uncharacterized protein involved in propionate catabolism R alternate gene name: yqiP 0.2427668000 14 1.920414e-02 -1.253275e-03 -0.0640030900 -0.1322513000 1.110351e+00 20 14 TRUE FALSE 584 4.1913113 3.8142663 2.1942362 3.8765353 1.7726334 2.5564774 0.9047325 0.8284993 U 0.8425356 0.9721545 13.213333 0.79976655 0.9617428 0.81046416 0.99013893 TRUE 0.4623656 0.98855201 TRUE 0.951830492 0.9721545 0.8519084 0.9311052 0 0.95318811 0.96659750 0.9120888 0.8777819 0.4130244 1.237025763 1.24494808 0.66113383 1.34588417 0.44327398 0.94865850 -0.13341231 -0.221892955 0.73608950 0.4932813 1423 33 38954 38955 1 138 Same - - 0.000000 -1.97064604 0.0000000 -3.6340537 1.446823 3.421078 1.1535077 183 Acetyl-CoA acetyltransferase I acetyl-CoA acetyltransferase 1.505270 3.345974 1.0476595 584 Glycerophosphoryl diester phosphodiesterase C similar to glycerophosphodiester phosphodiesterase 0.0269819500 14 3.415998e-03 2.193213e-03 0.0992535800 0.1749329000 2.631767e-01 0 41 14 TRUE FALSE 579 0.7068768 0.4340070 0.3749267 0.6309360 1.7726334 1.0078639 1.0752512 1.1105731 N 0.9470624 0.6217459 29.893333 0.31525585 0.1874227 0.33015864 0.09599793 FALSE 0.5165341 0.10189498 FALSE 0.078983387 0.6217459 0.1484588 0.3888645 0 0.04701099 0.03444316 0.1826897 0.2841915 0.5803408 -0.798701183 -1.08185954 -0.97988974 -0.98660413 0.43216453 -0.13931577 0.18084603 0.006829022 0.13762411 0.1865860 1423 33 38978 38979 1 23 Same - - 1.887070 3.11657764 5.0036473 5.0036473 1.488224 3.258816 1.0201552 - - - spoIIIAC 1.518442 3.398542 1.0806317 - - - spoIIIAB 0.1456840000 4 9.131082e-04 6.575942e-03 0.2053769000 0.5179478000 3.081463e-02 4 7 TRUE FALSE 557 2.3849648 2.2458053 2.1942362 1.7896236 0.8413194 2.2700731 1.2716624 1.1552094 U 0.8425356 0.9173605 15.126667 0.74039505 0.8796790 0.75328613 0.95423614 TRUE 0.5636992 0.96420878 TRUE 0.912926414 0.9173605 0.7399464 0.8112205 0 0.89117957 0.87445344 0.8869742 0.6907333 0.5403929 0.086136897 0.34413357 0.65795282 0.11750393 -0.18558059 0.79891977 0.07411767 0.240200699 0.47021604 0.4843924 1423 33 38980 38981 1 76 Same - - 0.000000 2.21965128 2.2196513 2.2196513 1.518060 3.521569 1.1184641 3854 Uncharacterized protein conserved in bacteria S spoIIIAA 1.448540 3.535800 1.1297648 - - - alternate gene name: yqgE 0.0676577700 2 4.832942e-03 2.692378e-03 0.0618061500 0.2010402000 3.154326e-01 7 2 TRUE FALSE 555 0.7068768 1.6218247 1.8173131 0.9932597 0.7397029 1.6642622 1.0875755 1.0899640 U 0.8425356 0.7249379 22.786667 0.32723554 0.4932147 0.34242144 0.32128825 FALSE 0.5123031 0.33211478 FALSE 0.217671845 0.7249379 0.3525629 0.5050088 0 0.32078371 0.25391955 0.3184607 0.6443831 0.5811859 -0.808409657 -0.10868639 0.40158252 -0.38186737 -0.46263249 0.45834947 0.16706062 -0.023457701 0.42141647 0.4788926 1423 33 39003 39004 1 71 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.694364 3.476213 0.9158428 - - - yqzE 1.418262 3.094334 0.9949595 - - - probably part of the DNA transport machinery 0.0000000000 0 7.623202e-02 -7.064352e-04 -0.2430958000 -0.0744335400 1.136119e+00 1 0 TRUE FALSE 548 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.9504701 0.8231146 U 0.8425356 0.6465615 21.980000 0.35499218 0.2698738 0.37075631 0.16904237 FALSE 0.4655540 0.15053234 FALSE 0.105425811 0.6465615 0.1973134 0.4145726 0 0.13816548 0.17818952 0.3862285 0.4615591 0.4250811 -0.798657668 -0.71574267 -0.60227931 -0.99154029 -0.87476261 -0.62940202 0.05585050 -0.190584709 0.25626581 0.4700036 1423 33 39010 39011 1 412 Same - - 0.000000 -0.58155612 0.0000000 -0.5815561 1.488222 3.298813 1.0762172 2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB NU late competence gene 1.487103 3.137892 0.9910430 598 Mg2+ and Co2+ transporters P alternate gene name: yqhC~similar to hypothetical proteins 0.0085608650 2 1.252204e-06 4.464284e-03 0.1349154000 0.3986533000 1.144427e-04 12 2 TRUE FALSE 541 0.7068768 0.4644251 0.4506893 0.6309360 0.7397029 0.7333333 1.2039204 1.1594513 U 0.8425356 0.6154499 38.880000 0.06777475 0.1654464 0.07221236 0.01420808 FALSE 0.5431440 0.01684640 FALSE 0.013432433 0.6154499 0.1360866 0.3825418 0 0.07783957 0.06860739 0.2327438 0.3758336 0.5340003 -0.804983995 -0.96755993 -0.88017835 -0.98608961 -0.46990969 -0.48880219 0.08880229 0.588614380 0.19538406 0.4788926 1423 33 39036 39037 1 154 Same - - 0.000000 -4.09686736 0.0000000 -5.8114908 1.268813 2.795386 0.9857498 226 ABC-type phosphate transport system, periplasmic component P alternate gene name: yzmB~similar to phosphate ABC transporter (binding protein) 1.381132 2.973584 1.0354104 768 Cell division protein FtsI/penicillin-binding protein 2 M penicillin-binding protein 2A 0.0643425100 12 1.261540e-02 6.037718e-03 0.1040265000 0.3899100000 2.402501e-01 0 40 12 TRUE FALSE 525 0.7068768 0.4324205 0.3547540 0.6309360 1.6147493 1.6183579 1.2001539 1.1197460 N 0.9470624 0.6192651 31.393333 0.29731476 0.1788168 0.31175556 0.08436214 FALSE 0.5060104 0.08623799 FALSE 0.067740855 0.6192651 0.1435827 0.3863638 0 0.04179384 0.03540000 0.1833317 0.2908000 0.5430650 -0.805518532 -1.09185316 -1.00808960 -0.98862773 0.33717444 0.39528006 0.11231993 0.003114992 0.14050936 0.2282587 1423 33 39056 39057 1 329 Same - - 0.000000 1.61272527 1.6127253 1.6127253 1.319120 2.879945 1.0085156 2010 Cytochrome c, mono- and diheme variants C cytochrome c550 1.330296 2.844448 0.9886491 568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) K RNA polymerase major sigma-43 factor (sigma-A) 0.0154101700 1 1.248969e-04 9.211086e-03 0.2485514000 0.5856310000 2.179140e-03 0 1 24 TRUE FALSE 519 0.7068768 1.3851142 1.6120340 0.7392160 0.6869968 0.8154098 1.2998106 1.1596882 N 0.9470624 0.7247759 37.813333 0.09678391 0.4928029 0.10291123 0.09429621 FALSE 0.5808737 0.12609783 FALSE 0.074721602 0.7247759 0.3522405 0.5048058 0 0.14392363 0.12352413 0.2181415 0.5617123 0.5439850 -0.807037040 -0.19703372 0.30345903 -0.48902128 -0.61209904 -0.35575671 0.04458674 0.501008739 0.33560480 0.2282587 1423 33 39058 39059 1 34 Same - - 0.000000 0.00000000 0.0000000 -0.1643031 1.451577 3.175691 1.0697001 358 DNA primase (bacterial type) L DNA primase 1.383485 3.034467 0.9823398 1671 Uncharacterized protein conserved in bacteria S alternate gene name: yqfM~similar to hypothetical proteins 0.0006148701 3 4.636494e-03 -1.148139e-03 -0.0052003770 -0.1134337000 4.700898e-01 19 3 TRUE FALSE 517 0.7068768 0.4792286 0.7887573 0.6309360 0.7788880 0.6478427 0.9195246 1.0258947 U 0.8425356 0.6568411 17.380000 0.64075491 0.3022034 0.65629694 0.43580983 FALSE 0.4915866 0.42755293 FALSE 0.324150332 0.6568411 0.2175930 0.4256053 0 0.42337821 0.41810577 0.7605289 0.3654408 0.5054082 -0.799341970 -0.93690052 -0.59647149 -0.98638853 -0.32064117 -0.61642316 -0.06688602 -0.055295368 0.18450247 0.4932813 1423 33 39085 39086 1 120 Same - - 17.040346 6.67542871 41.3486130 39.6028661 1.479252 3.216803 1.0486776 1420 Transcriptional regulator of heat shock gene K transcriptional regulator 1.446381 3.078661 1.0564349 635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases H coproporphyrinogen III oxidase 0.0680600400 34 1.080457e-03 1.491496e-03 0.0510056800 0.1288319000 1.129012e-01 0 47 34 TRUE FALSE 492 4.2802750 3.8104804 3.0925865 3.9054918 2.5206472 1.6694282 1.0501932 1.1355335 N 0.9470624 0.9847940 28.140000 0.29976529 0.9793764 0.31427189 0.95311613 TRUE 0.5207183 0.95668535 TRUE 0.769704087 0.9847940 0.8778404 0.9616423 0 0.37703068 0.32956077 0.1978496 0.8321606 0.5518137 1.254859593 1.18879405 0.87049941 1.31897003 0.58197647 0.46146898 0.19514022 0.091336618 0.66588168 0.2282587 1423 33 39087 39088 1 134 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.399792 3.053339 1.0405055 481 Membrane GTPase LepA M GTP-binding protein 1.513056 3.216922 1.0424211 - - - alternate gene name: yqeP 0.0000000000 0 1.282863e-02 -1.941307e-03 -0.0001261986 -0.2068478000 1.104211e+00 60 0 TRUE FALSE 490 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.8487615 0.8293463 U 0.8425356 0.6465615 29.506667 0.31458649 0.2698738 0.32947286 0.14504237 FALSE 0.4578470 0.12531434 FALSE 0.086990477 0.6465615 0.1973134 0.4145726 0 0.05306601 0.07278348 0.1857912 0.4639929 0.4165397 -0.798889230 -0.71414132 -0.60592314 -1.00060999 -0.88258224 -0.67743329 -0.26528297 -0.198573776 0.25595403 0.4788926 1423 33 39092 39093 1 404 Same - - 9.450637 5.89527015 28.3580541 27.8083640 1.459170 3.045213 0.9800381 1466 DNA polymerase III, delta subunit L similar to hypothetical proteins 1.483517 3.421190 1.1500161 2333 Predicted hydrolase (metallo-beta-lactamase superfamily) R putative integral membrane protein 0.1563832000 16 5.927430e-04 2.401904e-03 0.0913243600 0.2178927000 5.447849e-02 27 16 TRUE FALSE 487 3.6971188 3.4652115 2.7125837 3.4273094 1.9105987 2.3117533 1.0972495 1.1495189 U 0.8425356 0.9707454 38.793333 0.06990448 0.9597484 0.07447039 0.64184090 TRUE 0.5067108 0.64798826 TRUE 0.302719810 0.9707454 0.8490197 0.9277730 0 0.44109109 0.40191105 0.2315610 0.8502188 0.5401070 0.909977780 1.05820122 0.84355451 1.16025122 0.46550960 0.80007170 0.17230894 0.200226955 0.69040411 0.4932813 1423 33 39243 39244 1 190 Same - - 1.049822 0.00000000 1.9821990 1.9821990 1.368010 2.975672 0.9516766 2893 Phosphotransferase system, mannose/fructose-specific component IIA G phosphotransferase system (PTS) fructose-specific enzyme IIA component 1.484116 3.193017 1.0763800 1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain KT transcriptional regulator (NifA/NtrC family) 0.0059473920 4 1.348057e-02 -3.342915e-03 -0.0582730100 -0.3183971000 1.279269e+00 4 7 TRUE FALSE 408 2.0062463 1.5412032 0.7887573 0.8882204 0.8413194 0.7071556 0.7822995 0.7920213 U 0.8425356 0.8156354 33.780000 0.23565997 0.6980914 0.24816376 0.41619889 FALSE 0.4336306 0.35309764 FALSE 0.212938257 0.8156354 0.5340403 0.6313468 0 0.11429716 0.15710800 0.1865951 0.6708311 0.4091031 -0.131378781 -0.11525641 -0.61597878 -0.42360582 -0.15370112 -0.52144964 -0.42854743 -0.217504172 0.44828122 0.4932813 1423 33 39320 39321 1 117 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.296826 2.772817 0.9563796 1388 FOG: LysM repeat M similar to spore coat protein 1.455745 3.130783 1.0458350 379 Quinolinate synthase H quinolinate synthetase 0.0000000000 0 2.525514e-02 -4.328230e-03 -0.1340908000 -0.2776593000 1.396224e+00 0 0 45 TRUE FALSE 375 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.8055663 0.7669091 N 0.9470624 0.6604288 27.933333 0.29891749 0.3132497 0.31340143 0.16281532 FALSE 0.4262510 0.12624322 FALSE 0.084073880 0.6604288 0.2246766 0.4295108 0 0.04478725 0.06401201 0.1988717 0.4086360 0.4067351 -0.826919635 -0.74609383 -0.62573226 -1.02180695 -0.91446246 -0.67063034 -0.39789588 -0.197627525 0.21599317 0.2336149 1423 33 39329 39330 1 321 Same - - 0.000000 -0.78750994 0.0000000 -0.7875099 1.405648 2.952138 0.9285647 - - - sporulation initiation phosphoprotein 1.217955 2.755103 0.9747388 211 Ribosomal protein L27 J ribosomal protein L27 (BL24) 0.0030846370 1 3.522875e-02 3.083341e-03 0.2359586000 0.1963616000 5.970220e-01 1 59 TRUE FALSE 370 0.7068768 0.4576196 0.4317272 0.6309360 0.6869968 0.6702892 1.0855714 0.9779784 U 0.8425356 0.6133614 37.546667 0.10490931 0.1580570 0.11148755 0.02152911 FALSE 0.5038988 0.02186010 FALSE 0.017779734 0.6133614 0.1319847 0.3804617 0 0.06509479 0.05537782 0.2087599 0.3586192 0.5428956 -0.819861255 -1.02449214 -0.92539139 -1.00679820 -0.61562301 -0.59638630 0.17726353 -0.123203187 0.18180158 0.4843924 1423 33 39332 39333 1 147 Same - - 1.757858 3.11657764 4.8744356 4.8744356 1.166020 2.368178 0.8106273 261 Ribosomal protein L21 J ribosomal protein L21 (BL20) 1.515449 3.424834 1.0728853 1994 Zn-dependent proteases R protease 0.0208105400 4 1.221009e-01 -2.410751e-02 -0.7733770000 -0.7937328000 3.212575e+00 51 4 TRUE FALSE 367 2.3069130 2.2212855 2.1942362 1.7678198 0.8413194 0.9009406 0.6497646 0.6198095 U 0.8425356 0.9128267 30.760000 0.30587658 0.8724475 0.32054354 0.75087906 TRUE 0.3138914 0.57964524 TRUE 0.353611718 0.9128267 0.7307156 0.8021196 0 0.11061857 0.16081671 0.1834927 0.6814104 0.3935834 0.006662691 0.27736961 0.64436004 0.06086804 -0.19072507 -0.26844546 -0.60971782 -0.236999724 0.46025821 0.4843924 1423 33 39334 39335 1 151 Same - - 0.000000 1.72214170 2.5096516 1.7221417 1.395500 2.947546 0.9675309 739 Membrane proteins related to metalloendopeptidases M inhibitor of SpoIVFB 1.396177 3.120501 1.0550897 2894 Septum formation inhibitor-activating ATPase D ATPase activator of MinC 0.0325390700 3 4.586129e-07 6.252000e-04 0.0381048500 0.0884053600 4.634455e-05 0 3 34 TRUE FALSE 365 0.7068768 1.4773944 1.7457143 1.1291750 0.7788880 1.1301219 1.0279939 1.1592898 N 0.9470624 0.7352363 31.120000 0.30124584 0.5190218 0.31579177 0.31750789 FALSE 0.5104774 0.32665957 FALSE 0.211063944 0.7352363 0.3730703 0.5180675 0 0.11979678 0.10180861 0.1810948 0.5596611 0.5456060 -0.815129676 -0.18639468 0.36094767 -0.36092522 -0.32811711 0.04227854 0.24047765 0.618842946 0.33886853 0.2076394 1423 33 39339 39340 1 91 Same - - 4.793596 2.29780425 11.7026058 9.5661923 1.313745 2.984868 1.0437019 1077 Actin-like ATPase involved in cell morphogenesis D cell-shape determining protein 1.473868 3.318066 1.0721722 2003 DNA repair proteins L similar to DNA repair protein 0.0299746700 35 2.563938e-02 -5.678766e-03 -0.1500828000 -0.4154543000 1.748079e+00 0 37 35 TRUE FALSE 360 3.1647354 2.7937575 1.8967838 2.6965418 2.5470308 1.0771888 0.7356791 0.7166310 N 0.9470624 0.9442332 24.840000 0.30530189 0.9211157 0.31995400 0.83691170 TRUE 0.3892367 0.76582861 TRUE 0.520284492 0.9442332 0.7947633 0.8676273 0 0.23017038 0.30398604 0.2534311 0.7619516 0.4063774 0.526669016 0.70780020 0.44085385 0.76461832 0.59603828 -0.07117627 -0.51802274 -0.225404438 0.56267072 0.2282587 1423 33 39347 39348 1 131 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.384523 2.909262 0.9941359 - - - spoVID 1.386851 3.112279 1.0850471 1 Glutamate-1-semialdehyde aminotransferase H glutamate-1-semialdehyde 2,1-aminotransferase 0.0000000000 0 5.418562e-06 1.234717e-03 0.0531132800 0.1498935000 4.577706e-04 0 50 TRUE FALSE 352 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0628076 1.1596773 U 0.8425356 0.6465615 29.233333 0.31220131 0.2698738 0.32702866 0.14367321 FALSE 0.5059992 0.14665102 FALSE 0.102567091 0.6465615 0.1973134 0.4145726 0 0.08773199 0.07498782 0.1904058 0.4644901 0.5426049 -0.798931080 -0.71414326 -0.62196459 -1.00272780 -0.87967904 -0.63915320 0.18399270 0.629199728 0.25633496 0.4754237 1423 33 39360 39361 1 190 Same - - 0.000000 -3.22637812 0.6069260 -3.2263781 1.454115 3.078821 1.0248407 457 FOG: TPR repeat R ysoA 1.262366 2.694665 0.9336593 66 3-isopropylmalate dehydratase small subunit E 3-isopropylmalate dehydratase (small subunit) 0.0554431000 5 3.676777e-02 -5.272575e-03 -0.0316653700 -0.2828741000 1.518294e+00 5 34 TRUE FALSE 341 0.7068768 0.4348436 0.3614099 0.4157343 0.9173329 1.5165075 0.8015805 0.7457870 U 0.8425356 0.6054607 33.780000 0.23565997 0.1296412 0.24816376 0.04390800 FALSE 0.4127533 0.03126922 FALSE 0.027775023 0.6054607 0.1164761 0.3726694 0 0.03145714 0.04645314 0.1874667 0.3514706 0.4000103 -0.806397170 -1.09384253 -1.00040360 -0.68014934 -0.05732281 0.35786031 -0.42785061 -0.196467343 0.17433805 0.4932813 1423 33 39378 39379 1 63 Same - - 0.000000 3.11657764 3.1165776 1.2122615 1.542665 3.327410 1.0151326 824 Predicted thioesterase R ysmA 1.349943 3.030731 1.0472878 479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit C succinate dehydrogenase (iron-sulfur protein) 0.0499670600 10 3.714164e-02 -8.637260e-03 -0.2288232000 -0.5727237000 2.352155e+00 10 39 TRUE FALSE 329 0.7068768 1.2159580 2.1942362 1.3128115 1.4126521 1.4314126 0.6912865 0.6645317 U 0.8425356 0.7781789 20.720000 0.41906394 0.6192698 0.43575113 0.53987341 TRUE 0.3548945 0.39227482 FALSE 0.251775532 0.7781789 0.4588546 0.5759166 0 0.22569188 0.30141252 0.4728370 0.5476067 0.4031833 -0.819861306 -0.23500401 0.66927929 -0.23093707 0.27855097 0.22897110 -0.59140742 -0.221267618 0.32479514 0.4700036 1423 33 39407 39408 1 152 Same - - 0.000000 -0.78750994 0.0000000 -0.7875099 1.410387 3.387231 1.1213452 1966 Carbon starvation protein, predicted membrane protein T carbon starvation-induced protein 1.351293 2.942900 1.0134295 3534 Alpha-L-arabinofuranosidase G alpha-L-arabinofuranosidase 0.0113141400 8 3.492150e-03 7.273671e-04 0.0564575900 0.0969335800 2.312784e-01 0 23 8 TRUE FALSE 312 0.7068768 0.4576196 0.4317272 0.6309360 1.2181750 0.7639932 1.0311984 1.1219031 N 0.9470624 0.6277814 31.206667 0.30004680 0.2080758 0.31456091 0.10122941 FALSE 0.5111579 0.10536365 FALSE 0.078838877 0.6277814 0.1603276 0.3950001 0 0.05397718 0.04038127 0.1814479 0.3200648 0.5755335 -0.815129718 -1.01611826 -0.92242901 -1.00577187 0.16700425 -0.41692881 0.20376493 0.013353413 0.15954711 0.2282587 1423 33 39416 39417 1 208 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.416244 3.099450 1.0525133 2160 L-arabinose isomerase G L-arabinose isomerase 1.440547 3.297867 1.1056750 3507 Beta-xylosidase G arabinan-endo 1,5-alpha-L-arabinase 0.0015572600 1 5.906191e-04 -9.064119e-05 0.0212936300 -0.0160411800 6.920494e-02 G 8 1 TRUE FALSE 303 0.7068768 0.7004818 0.7887573 0.6309360 0.6869968 0.6544738 0.9946998 1.1464506 Y 2.7866030 0.8510763 34.740000 0.20277422 0.7662836 0.21402171 0.45472408 FALSE 0.5175823 0.47221787 FALSE 0.295194985 0.8510763 0.6054919 0.6886927 0 0.32513931 0.26467848 0.1914301 0.7908990 0.5723730 -0.818558788 -0.73401042 -0.60962621 -1.01312298 -0.63224342 -0.61364648 0.18406223 0.124566205 0.60323246 2.2958961 1423 33 39445 39446 1 244 Same - - 0.000000 2.99980984 2.9998098 1.5755553 1.400607 3.015443 1.0204138 749 DNA polymerase I - 3'-5' exonuclease and polymerase domains L DNA polymerase I 1.477478 3.258116 1.0610767 642 Signal transduction histidine kinase T two-component sensor histidine kinase 0.0312709600 9 5.909127e-03 -1.146132e-03 0.0026037720 -0.1395034000 6.468649e-01 0 43 9 TRUE FALSE 286 0.7068768 1.3176798 2.0384385 1.2157935 1.3149848 1.1004678 0.8962640 0.9604279 N 0.9470624 0.7705883 35.926667 0.15974815 0.6023627 0.16911533 0.22360440 FALSE 0.4807299 0.21050197 FALSE 0.123083730 0.7705883 0.4436591 0.5652712 0 0.08693814 0.09924257 0.2025039 0.5191031 0.4635802 -0.818558786 -0.22324269 0.58328197 -0.34418130 0.23750076 -0.03976010 -0.12805070 -0.117175440 0.30259922 0.2282587 1423 33 39447 39448 1 212 Same - - 0.000000 2.50347317 3.1165776 1.0022820 1.438828 3.068249 0.9990972 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain TK two-component response regulator 1.245906 2.838788 1.0032863 39 Malate/lactate dehydrogenases C malate dehydrogenase 0.0018097620 27 3.721913e-02 -3.145975e-03 0.0429467800 -0.1392982000 1.197037e+00 27 30 TRUE FALSE 284 0.7068768 1.1979163 1.9356254 1.3128115 2.3456180 0.6564159 0.8970410 0.8110899 U 0.8425356 0.7539061 34.893333 0.19728591 0.5640091 0.20830852 0.24123956 FALSE 0.4559122 0.21036843 FALSE 0.125337168 0.7539061 0.4103119 0.5425225 0 0.07881714 0.10701345 0.1928769 0.5570927 0.4165600 -0.795516979 -0.28095623 0.45748086 -0.25540235 0.53655550 -0.59294996 -0.11473734 -0.185016646 0.33399020 0.4700036 1423 33 39554 39555 1 233 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.526879 3.344152 1.0542740 451 Nucleoside-diphosphate-sugar epimerases MG ytbQ 1.490923 3.357217 1.0790834 2124 Cytochrome P450 Q cytochrome P450-like enzyme 0.0031373070 2 1.292832e-03 7.430643e-03 0.1895690000 0.5556981000 3.633413e-02 2 8 TRUE FALSE 219 0.7068768 0.7004818 0.7887573 0.6309360 0.7397029 0.6715667 1.2875536 1.1539808 U 0.8425356 0.6465615 35.526667 0.17422545 0.2698738 0.18425538 0.07234360 FALSE 0.5711930 0.09410483 FALSE 0.064620380 0.6465615 0.1973134 0.4145726 0 0.09424299 0.08013651 0.2007997 0.4680105 0.5442834 -0.795979107 -0.71935728 -0.61033775 -0.99725973 -0.46364695 -0.56068105 0.08209891 0.225844531 0.25746424 0.4900225 1423 33 39560 39561 1 252 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.457079 3.116962 0.9958668 1424 Pimeloyl-CoA synthetase H 6-carboxyhexanoate-CoA ligase 1.503586 3.430029 1.0814560 1073 Hydrolases of the alpha/beta superfamily R ytaP 0.0015231530 2 2.162819e-03 2.998045e-03 0.1165907000 0.2492273000 1.589902e-01 4 2 TRUE FALSE 213 0.7068768 0.7004818 0.7887573 0.6309360 0.7397029 0.6540450 1.1170125 1.1288301 U 0.8425356 0.6465615 36.226667 0.14905133 0.2698738 0.15790916 0.06080656 FALSE 0.5101730 0.06317274 FALSE 0.042920601 0.6465615 0.1973134 0.4145726 0 0.09413628 0.08115655 0.2035155 0.4651955 0.5405583 -0.798889215 -0.71452765 -0.59206906 -0.98670779 -0.46872217 -0.60108025 0.12183206 0.031008291 0.25687585 0.4788926 1423 33 39614 39615 1 -3 Same - - 4.312538 3.82885623 8.6653406 7.2103674 1.390425 3.058491 1.0511166 4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily MR similar to N-acylamino acid racemase 1.469846 3.312326 1.0956190 318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II IQ O-succinylbenzoic acid-CoA ligase 0.1819051000 7 6.307732e-03 -1.490620e-03 -0.0104923700 -0.1658369000 6.793319e-01 14 7 TRUE FALSE 197 3.1051613 2.5237481 2.3901496 2.4237567 1.0944473 2.4044368 0.8769466 0.9512010 U 0.8425356 0.9543681 4.526667 0.81921732 0.9361374 0.82909782 0.98516884 TRUE 0.4779878 0.98382493 TRUE 0.948289123 0.9543681 0.8154836 0.8900635 0 0.81970420 0.85135795 0.8387239 0.7386832 0.4425185 0.397322026 0.53426637 0.75560251 0.52735694 0.07985315 0.82064904 -0.19188622 -0.117213158 0.52411315 0.5078801 1423 33 39616 39617 1 35 Same - - 12.066774 6.06850270 59.0651648 58.5355277 1.270161 2.803118 0.9463589 447 Dihydroxynaphthoic acid synthase H dihydroxynapthoic acid synthetase 1.628477 3.761903 1.1303268 596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) R alternate gene name: ytfB~similar to prolyl aminopeptidase 0.0871818600 19 1.283905e-01 -3.128686e-02 -0.7024126000 -0.8956453000 3.587216e+00 22 19 TRUE FALSE 195 3.9206239 4.1284442 2.7563385 4.2945664 2.0569670 1.8856513 0.6391835 0.6098274 U 0.8425356 0.9726504 17.553333 0.63240923 0.9624433 0.64811403 0.97782117 TRUE 0.3053278 0.95092729 TRUE 0.814306855 0.9726504 0.8529250 0.9322812 0 0.85671204 0.89894672 0.7246855 0.8947851 0.4019539 1.037918442 1.29870734 0.81728327 1.42236272 0.47400117 0.58196924 -0.66840474 -0.246418286 0.77166770 0.4754237 1423 33 39640 39641 1 88 Same - - 0.000000 0.00000000 0.0000000 -0.0800427 1.373939 3.093614 1.0337158 - - - yuaD 1.310459 2.909398 1.0309645 1454 Alcohol dehydrogenase, class IV C alcohol dehydrogenase 0.0110280700 1 4.029600e-03 5.177798e-03 0.1865655000 0.3903357000 1.142121e-01 1 33 TRUE FALSE 187 0.7068768 0.4861027 0.7887573 0.6309360 0.6869968 0.7616537 1.2004038 1.1350027 U 0.8425356 0.6565239 24.486667 0.30773877 0.3012208 0.32245354 0.16081138 FALSE 0.5195084 0.17162838 FALSE 0.117526000 0.6565239 0.2169668 0.4252614 0 0.08688119 0.07609826 0.2660648 0.3611217 0.5360016 -0.808409658 -0.93853164 -0.60966859 -1.00731012 -0.62603068 -0.43860949 0.09581526 0.071716593 0.18514066 0.4610350 1423 33 39680 39681 1 126 Same + + 0.000000 -1.18313610 0.0000000 -1.1831361 1.418021 3.193946 1.0942280 1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities E aminotransferase 1.479872 3.357044 1.1105230 642 Signal transduction histidine kinase T two-component sensor histidine kinase 0.0159979000 1 3.825557e-03 -1.667240e-04 0.0296488100 -0.0452127100 4.201486e-01 0 23 1 FALSE FALSE 169 0.7068768 0.4488664 0.4079109 0.6309360 0.6869968 0.8262286 0.9718282 1.0463958 N 0.9470624 0.6252004 28.766667 0.30640727 0.1992927 0.32108791 0.09906197 FALSE 0.4997433 0.09897037 FALSE 0.075021736 0.6252004 0.1552511 0.3923673 0 0.04874796 0.04198390 0.1954651 0.3121968 0.5390360 -0.809892715 -1.03945897 -0.96731543 -1.00080321 -0.62280770 -0.33750072 0.12724524 -0.070031006 0.15281437 0.2336149 1423 33 39704 39705 1 81 Same - - 0.000000 0.81877339 0.8187734 0.8187734 1.460205 3.097040 1.0435222 2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain TK two-component response regulator 1.491495 3.272227 1.0544664 4585 Signal transduction histidine kinase T two-component sensor histidine kinase 0.0528511300 1 9.790556e-04 2.780783e-03 0.1041714000 0.2494271000 8.009189e-02 2 1 TRUE FALSE 183 0.7068768 1.1350140 1.3003153 0.4893118 0.6869968 1.4734435 1.1172121 1.1442834 U 0.8425356 0.6879194 23.533333 0.31463583 0.3940690 0.32952341 0.22991799 FALSE 0.5072108 0.23506490 FALSE 0.154616670 0.6879194 0.2790554 0.4604223 0 0.21119409 0.18685679 0.2990030 0.5775057 0.5381313 -0.807300909 -0.35763748 -0.08351473 -0.64009324 -0.62465610 0.31249310 0.13964868 0.122430611 0.35011929 0.4932813 1423 33 39734 39735 1 358 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.392546 3.171965 1.0475101 - - - similar to antibiotic synthetase 1.465611 3.397589 1.1374762 1020 Non-ribosomal peptide synthetase modules and related proteins Q dhbF 0.0000000000 0 5.338408e-03 -1.266809e-03 -0.0057260810 -0.1420788000 5.798639e-01 0 3 TRUE FALSE 165 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.8947057 0.9872644 U 0.8425356 0.6465615 38.260000 0.08391693 0.2698738 0.08931020 0.03275037 FALSE 0.4847168 0.03086760 FALSE 0.020742647 0.6465615 0.1973134 0.4145726 0 0.07926606 0.08961887 0.2221609 0.4636603 0.4665342 -0.806446881 -0.71627732 -0.61432752 -0.99996108 -0.89515582 -0.64032443 -0.15672838 -0.099815189 0.25632085 0.4843924 1423 33 39739 39740 1 194 Same - - 0.000000 -1.70708281 0.0000000 -1.7534259 1.461053 3.445684 1.1117303 1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) IQR 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 1.528193 3.449492 1.0974069 2819 Predicted hydrolase of the alpha/beta superfamily R yuiI 0.0941768800 4 4.507746e-03 4.316198e-03 0.1644404000 0.3315584000 2.125002e-01 5 4 TRUE FALSE 160 0.7068768 0.4408335 0.3844109 0.6309360 0.8413194 1.9274303 1.1648841 1.1255203 U 0.8425356 0.6081226 33.980000 0.22903956 0.1392974 0.24130297 0.04587475 FALSE 0.5069255 0.04710272 FALSE 0.040602648 0.6081226 0.1216996 0.3752813 0 0.05437425 0.04688899 0.1860168 0.3566357 0.5389192 -0.822284082 -1.06898356 -1.00356324 -1.00994889 -0.15269731 0.64095106 0.12763534 0.031474569 0.17713999 0.4932813 1423 33 39981 39982 1 131 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.457182 3.322361 1.1803794 - - - yveF 1.428541 3.063216 1.0171211 1794 Aspartate racemase M amino acid racemase 0.0000000000 0 8.203362e-04 2.796312e-04 0.0252800200 0.0124339900 9.118550e-02 0 17 TRUE FALSE 38 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0081821 1.1414478 U 0.8425356 0.6465615 29.233333 0.31220131 0.2698738 0.32702866 0.14367321 FALSE 0.5189560 0.15326096 FALSE 0.107440227 0.6465615 0.1973134 0.4145726 0 0.10010043 0.07517393 0.1884627 0.4654625 0.5777862 -0.798656493 -0.70300904 -0.60334895 -0.98853345 -0.87245263 -0.62940196 0.20712918 0.102609389 0.25926909 0.4788926 1423 33 40070 40071 1 578 Same - - 0.000000 1.50385237 1.5038524 1.5038524 1.392457 2.903182 0.9766487 1544 Ribosome-associated protein Y (PSrp-1) J alternate gene name: yviI~similar to ribosomal protein S30AE family 1.458150 2.975547 0.9944611 - - - flagellar protein 0.0191091300 2 4.315598e-03 -1.059022e-03 -0.0025059430 -0.1157308000 4.634455e-01 37 2 TRUE FALSE -7 0.7068768 1.2741512 1.4783871 0.6116240 0.7397029 0.8668967 0.9174100 1.0269100 U 0.8425356 0.7021997 39.660000 0.05052094 0.4335541 0.05389415 0.03913223 FALSE 0.4919187 0.03793462 FALSE 0.022350963 0.7021997 0.3073734 0.4772013 0 0.16459368 0.16564231 0.2485932 0.6015972 0.4980983 -0.798889234 -0.24586317 0.19610686 -0.54285797 -0.46701254 -0.29294339 -0.08566690 -0.068908151 0.37502892 0.4700036 1423 33 40074 40075 1 233 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.432953 2.938461 0.9579818 1334 Uncharacterized flagellar protein FlaG N alternate gene name: yviH~similar to flagellar protein 1.216982 2.755217 0.8851292 1344 Flagellin and related hook-associated proteins N flagellin protein 0.0000000000 0 4.664348e-02 -2.468318e-03 0.0969567400 -0.0884390500 1.136119e+00 N 0 20 TRUE FALSE -11 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.9385946 0.8231146 Y 2.7866030 0.8510763 35.526667 0.17422545 0.7662836 0.18425538 0.40889675 FALSE 0.4641323 0.37466724 FALSE 0.219036907 0.8510763 0.6054919 0.6886927 0 0.21829382 0.27732902 0.1987354 0.7951140 0.4211907 -0.795516979 -0.71127414 -0.60305198 -0.99717567 -0.87747648 -0.63039021 0.03362858 -0.181487339 0.60741698 2.2958961 1423 33 40079 40080 1 11 Same - - 14.277113 0.89692637 42.8285571 42.7765711 1.355552 3.000176 0.9994777 1344 Flagellin and related hook-associated proteins N flagellar hook-associated protein 3 (HAP3) 1.403691 3.172338 1.0968800 1256 Flagellar hook-associated protein N flagellar hook-associated protein 1 (HAP1) 0.1356104000 10 2.317356e-03 1.120044e-03 0.0376166700 0.1339850000 1.498196e-01 N 11 10 TRUE FALSE -16 4.0872747 3.8789788 1.3560267 3.9491849 1.4126521 2.2134386 1.0538560 1.1290448 Y 2.7866030 0.9843724 9.613333 0.82154417 0.9787956 0.83132369 0.99531624 TRUE 0.5234954 0.99573488 TRUE 0.973011522 0.9843724 0.8769749 0.9606047 0 0.99494264 0.99337974 0.8897583 0.9795389 0.5673044 1.153455308 1.27003188 0.02237983 1.37428119 0.31785861 0.84007416 0.18240632 0.062734919 0.94895745 2.3025851 1423 33 40083 40084 1 74 Same - - 1.757858 0.08297929 2.3647839 1.8408372 1.475215 2.954407 0.9827918 - - - alternate gene name: yviB~similar to flagellar protein 1.425597 3.177909 1.0172601 1040 Predicted amidophosphoribosyltransferases R late competence gene 0.0440054400 3 2.461904e-03 2.583574e-04 0.0192057600 0.0042272260 2.691977e-01 3 26 TRUE FALSE -20 2.3069130 1.4985111 1.1557262 1.0838843 0.7788880 1.3240930 1.0044565 1.1078388 U 0.8425356 0.8740787 22.500000 0.33536920 0.8075833 0.35073577 0.67926221 TRUE 0.5060551 0.68451617 TRUE 0.492049316 0.8740787 0.6520297 0.7287837 0 0.25782637 0.20997035 0.3357388 0.5723748 0.5665545 0.066339010 -0.19088193 -0.28634099 -0.39061489 -0.31589764 0.17608098 0.21524012 -0.016646669 0.34462238 0.4843924 1423 33 40086 40087 1 106 Same - - 1.049822 3.11657764 5.0987766 4.1484164 1.450138 3.226624 1.0885107 4098 Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) L late competence protein 1.384676 3.037875 1.0132571 1307 Uncharacterized protein conserved in bacteria S alternate gene name: degV, sacU~similar to hypothetical proteins 0.1911925000 10 4.285369e-03 -1.059522e-03 -0.0029603790 -0.1053796000 4.386284e-01 10 22 TRUE FALSE -23 2.0062463 2.0951556 2.1942362 1.8219230 1.4126521 2.4277729 0.9262258 1.0364554 U 0.8425356 0.8938137 26.526667 0.30048558 0.8413225 0.31501135 0.69489708 TRUE 0.4940017 0.68978627 TRUE 0.485200819 0.8938137 0.6920598 0.7651724 0 0.19980565 0.19013549 0.2174022 0.6801729 0.5154003 -0.141597560 0.24435663 0.66794835 0.18374931 0.29633319 0.85606661 -0.01523554 -0.060385586 0.45803391 0.4700036 1423 33 40100 40101 1 227 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.498686 3.411336 1.0717811 2148 Sugar transferases involved in lipopolysaccharide synthesis M alternate gene name: yvhA 1.357966 3.167868 1.0660099 860 N-acetylmuramoyl-L-alanine amidase M N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49) 0.0001851224 1 1.980220e-02 -4.894590e-03 -0.1085354000 -0.4201520000 1.693225e+00 M 1 1 TRUE FALSE -33 0.7068768 0.7004818 0.7887573 0.6309360 0.6869968 0.6471659 0.7333280 0.7239033 Y 2.7866030 0.8510763 35.306667 0.18225375 0.7662836 0.19263804 0.42220980 FALSE 0.3938678 0.32195731 FALSE 0.181854498 0.8510763 0.6054919 0.6886927 0 0.19644646 0.27347423 0.1964152 0.7948826 0.3937474 -0.798889215 -0.71452765 -0.59206906 -0.98670779 -0.60526171 -0.62207438 -0.54373127 -0.235716119 0.60629986 2.2958961 1423 33 40111 40112 1 165 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.429566 3.311453 1.0863598 1682 ABC-type polysaccharide/polyol phosphate export systems, permease component GM permease 1.354339 2.838530 0.9607644 1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/Eps M CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase 0.0000000000 0 5.659067e-03 -5.800013e-04 0.0220862200 -0.0294275500 4.386284e-01 31 0 TRUE FALSE -38 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.9857313 1.0364554 U 0.8425356 0.6465615 32.313333 0.27951698 0.2698738 0.29345435 0.12541497 FALSE 0.4994538 0.12517551 FALSE 0.086889885 0.6465615 0.1973134 0.4145726 0 0.07787873 0.07316149 0.1839386 0.4647846 0.5168902 -0.795235543 -0.70013567 -0.59866866 -0.98488049 -0.86829253 -0.62549198 0.14994071 -0.081099987 0.25937441 0.4700036 1423 33 40136 40137 1 82 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.449081 3.259306 1.0827460 1879 ABC-type sugar transport system, periplasmic component G ribose ABC transporter (ribose-binding protein) 1.356851 3.021017 1.0393644 3103 SH3 domain protein T similar to hypothetical proteins from B. subtilis 0.0000000000 0 8.506327e-03 -1.806928e-03 -0.0124580400 -0.1543105000 7.340986e-01 0 21 0 FALSE FALSE -35 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.8848274 0.9343703 N 0.9470624 0.6604288 23.720000 0.31283341 0.3132497 0.32767648 0.17194910 FALSE 0.4766682 0.15905567 FALSE 0.107271521 0.6604288 0.2246766 0.4295108 0 0.08392001 0.10263655 0.2880518 0.4156697 0.4447335 -0.808935791 -0.72251225 -0.61553643 -1.00590349 -0.87936181 -0.63915334 -0.16465951 -0.129557422 0.22038880 0.2282587 1423 33 40139 40140 1 100 Same - - 0.000000 0.00000000 0.0000000 -0.3285041 1.458310 3.197741 1.0150560 2249 Putative NADPH-quinone reductase (modulator of drug activity B) R similar to NAD(P)H oxidoreductase 1.280521 2.760494 0.9440455 3527 Alpha-acetolactate decarboxylase Q alpha-acetolactate decarboxylase 0.0041542240 6 3.160881e-02 -5.257199e-03 -0.0502144700 -0.3161743000 1.554457e+00 6 15 TRUE FALSE -34 0.7068768 0.4729946 0.7887573 0.6309360 0.9914208 0.6836207 0.7836178 0.7425945 U 0.8425356 0.6571287 25.820000 0.29911575 0.3030932 0.31360499 0.15655024 FALSE 0.4079961 0.11340943 FALSE 0.075845220 0.6571287 0.2181607 0.4259173 0 0.04316852 0.06170502 0.2320943 0.3511985 0.4068949 -0.808715383 -0.97438324 -0.60919392 -1.00932650 0.02299026 -0.56821768 -0.41786807 -0.216712291 0.17870061 0.4788926 1423 33 40192 40193 1 181 Same + + 0.000000 0.00000000 0.0000000 -0.6107715 1.487494 3.213311 1.0651874 347 Nitrogen regulatory protein PII E nitrogen-regulated PII-like protein 1.328609 3.107281 1.0337731 671 Membrane-associated phospholipid phosphatase I similar to bacteriocin transport permease 0.0023557410 10 2.524451e-02 -6.147447e-03 -0.1198345000 -0.4733633000 1.908469e+00 0 38 10 FALSE FALSE -51 0.7068768 0.4609127 0.7887573 0.6309360 1.4126521 0.6619759 0.7172019 0.6978602 N 0.9470624 0.6713383 33.320000 0.25038961 0.3461147 0.26340559 0.15024289 FALSE 0.3760690 0.09630561 FALSE 0.061711033 0.6713383 0.2462353 0.4415661 0 0.02465153 0.03615941 0.1819579 0.2979617 0.4025221 -0.798889237 -0.98513998 -0.59016954 -0.98670780 0.28611238 -0.58767036 -0.58837475 -0.211575549 0.14432167 0.2542341 1423 33 40203 40204 1 135 Same - - 0.000000 -2.30062678 0.0000000 -2.3911562 1.344501 3.056331 0.9995102 1959 Predicted transcriptional regulator K ywnA 1.454196 3.269027 1.0855073 804 Urea amidohydrolase (urease) alpha subunit E urease (alpha subunit) 0.0055919340 14 1.203291e-02 -2.546112e-03 -0.0577044800 -0.2081617000 9.724751e-01 0 14 24 TRUE FALSE -52 0.7068768 0.4365648 0.3681933 0.6309360 1.7726334 0.7022424 0.8476588 0.8609778 N 0.9470624 0.6207698 29.600000 0.31508824 0.1840448 0.32998692 0.09401079 FALSE 0.4675790 0.08351770 FALSE 0.064869795 0.6207698 0.1465400 0.3878791 0 0.02707909 0.03556761 0.1880574 0.2860604 0.4301016 -0.819904327 -1.12747109 -1.03607732 -1.02164018 0.43438896 -0.56858167 -0.24594993 -0.151015116 0.13735647 0.2282587 1423 33 40206 40207 1 997 Same - - 0.000000 0.00000000 0.0000000 -0.2959656 1.490092 3.319083 1.0746028 831 Urea amidohydrolase (urease) gamma subunit E urease (gamma subunit) 1.331264 2.486395 0.9741210 3237 Uncharacterized protein conserved in bacteria S ywmG 0.0158346800 5 2.522611e-02 -6.203159e-03 -0.1240123000 -0.4791982000 1.924625e+00 21 5 TRUE FALSE -55 0.7068768 0.4738701 0.7887573 0.6309360 0.9173329 0.8229458 0.7153833 0.6969135 U 0.8425356 0.6570883 40.093333 0.04241782 0.3029683 0.04527580 0.01889012 FALSE 0.3749875 0.01141976 FALSE 0.007357821 0.6570883 0.2180810 0.4258735 0 0.04324560 0.06517636 0.2509406 0.3437037 0.3933171 -0.810102100 -0.95417271 -0.60731611 -1.00260519 -0.05067589 -0.34708878 -0.57922110 -0.247179796 0.17226501 0.4788926 1423 33 40228 40229 1 423 Same - - 1.049822 2.50965164 4.4918506 4.4918506 1.489569 3.535842 1.1257284 - - - ATP synthase (subunit i) 1.370096 3.027248 1.0198988 35 Uracil phosphoribosyltransferase F uracil phosphoribosyltransferase 0.0115719200 3 1.427383e-02 -3.487683e-03 -0.0730481100 -0.3309319000 1.341609e+00 3 56 TRUE FALSE -75 2.0062463 2.1681611 1.9745722 1.7290174 0.7788880 0.7668502 0.7764426 0.7770763 U 0.8425356 0.8804925 38.980000 0.06536980 0.8187143 0.06966171 0.24004558 FALSE 0.4265206 0.19023388 FALSE 0.093607144 0.8804925 0.6650288 0.7404001 0 0.17772397 0.23722256 0.2338359 0.7234055 0.4100214 -0.140431069 0.30208129 0.51148018 0.09231155 -0.32084544 -0.41640172 -0.41292846 -0.193131113 0.50470220 0.5078801 1423 33 40341 40342 1 94 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.466772 2.977146 0.9589337 - - - alternate gene name: ipa-51d 1.441339 3.140605 1.0238067 1621 Beta-fructosidases (levanase/invertase) G sucrase-6-phosphate hydrolase 0.0000000000 0 6.468382e-04 9.412298e-04 0.0406139600 0.0781232500 7.309575e-02 0 14 TRUE FALSE -132 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 1.0245566 1.1458025 U 0.8425356 0.6465615 25.273333 0.30122224 0.2698738 0.31576755 0.13743646 FALSE 0.5234695 0.14895759 FALSE 0.104265017 0.6465615 0.1973134 0.4145726 0 0.11998530 0.09600342 0.2363773 0.4633234 0.5621451 -0.810411531 -0.71913078 -0.61773308 -0.99910348 -0.88199898 -0.64225113 0.21922799 0.140116305 0.25544171 0.4788926 1423 33 40378 40379 1 428 Same + + 0.000000 0.00000000 0.0000000 0.0000000 1.396044 3.030068 1.0403161 1404 Subtilisin-like serine proteases O extracellular serine protease 1.486090 3.510466 1.1323297 1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific G negative regulatory protein of SacY 0.0000000000 0 8.108285e-03 -1.618142e-03 -0.0065569070 -0.1828007000 8.348263e-01 0 0 0 FALSE FALSE -145 0.7068768 0.7004818 0.7887573 0.6309360 0.7835903 0.7601760 0.8657590 0.8996392 N 0.9470624 0.6604288 39.080000 0.06302134 0.3132497 0.06717014 0.02976638 FALSE 0.4764579 0.02716209 FALSE 0.017428894 0.6604288 0.2246766 0.4295108 0 0.06085474 0.07963311 0.2402846 0.4104964 0.4282149 -0.799341970 -0.72446824 -0.59647149 -0.98638853 -0.87126525 -0.64168283 -0.22290796 -0.135688302 0.21480141 0.2282587 1423 33 40397 40398 1 128 Same - - 2.525729 -1.18313610 7.5771859 5.1175718 1.408106 3.219440 1.0872163 1440 Phosphotransferase system cellobiose-specific component IIB G phosphotransferase system (PTS) lichenan-specific enzyme IIB component 1.440752 3.121001 1.0331036 3711 Transcriptional antiterminator K transcriptional regulator (antiterminator) 0.0954198800 9 1.065746e-03 -2.535896e-04 0.0167279200 -0.0296178900 1.185248e-01 0 12 9 TRUE FALSE -142 2.6359335 2.2730516 0.4079109 2.2263229 1.3149848 1.9486152 0.9853720 1.1334709 N 0.9470624 0.8461627 28.993333 0.30935457 0.7571703 0.32411043 0.58275401 TRUE 0.5105776 0.59300597 TRUE 0.407625082 0.8461627 0.5955675 0.6804331 0 0.40949703 0.33155989 0.1927795 0.8393956 0.5829981 0.235096670 0.36954265 -0.94734270 0.42847403 0.25257176 0.65133066 0.13282442 0.058179050 0.67500527 0.2282587 1423 33 40480 40481 1 106 Same - - 3.189888 0.82521533 5.7349904 3.4134438 1.320354 2.940619 1.0137877 274 Deoxyribose-phosphate aldolase F deoxyribose-phosphate aldolase 1.529383 3.410216 1.0500320 2390 Transcriptional regulator, contains sigma factor-related N-terminal domain K transcriptional regulator 0.0034144040 21 4.369317e-02 -1.090710e-02 -0.2482718000 -0.6709281000 2.688547e+00 0 41 21 TRUE FALSE -173 2.8152344 1.9750820 1.3214404 1.9180657 2.1534488 0.6730476 0.6664082 0.6402741 N 0.9470624 0.9170721 26.526667 0.30048558 0.8792212 0.31501135 0.75769591 TRUE 0.3329179 0.60946673 TRUE 0.378160432 0.9170721 0.7393592 0.8106382 0 0.10759781 0.15128282 0.2163795 0.6189615 0.4034906 0.219844537 0.14924016 -0.04207620 0.27561407 0.50672998 -0.56525352 -0.62392388 -0.226114520 0.39229300 0.2282587 1423 33 40504 40505 1 109 Same - - 0.000000 0.00000000 0.0000000 0.0000000 1.489131 3.246887 0.9412205 745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain TK similar to two-component response regulator [YxdK] 1.467331 3.278144 1.0119555 191 Fructose/tagatose bisphosphate aldolase G fructose-1,6-bisphosphate aldolase 0.0009520652 1 4.752566e-04 3.174324e-03 0.0944671800 0.2916917000 3.559640e-02 1 5 TRUE FALSE -191 0.7068768 0.7004818 0.7887573 0.6309360 0.6869968 0.6493402 1.1434322 1.1541384 U 0.8425356 0.6465615 26.906667 0.30139074 0.2698738 0.31594051 0.13753137 FALSE 0.5164565 0.14553028 FALSE 0.101743081 0.6465615 0.1973134 0.4145726 0 0.09714513 0.08385292 0.2124794 0.4605220 0.5403513 -0.808935789 -0.73090361 -0.59882994 -1.00724979 -0.62926195 -0.61776859 0.14034857 0.226546749 0.25330397 0.4754237 1423 33 40511 40512 1 204 Same - - 9.795457 1.40087789 13.9204710 13.9204710 1.371164 3.045958 1.0306885 3962 Acetolactate synthase E alternate gene name: yxdD~myo-inositol catabolism 1.360012 3.027876 1.0316139 524 Sugar kinases, ribokinase family G alternate gene name: yxdC~myo-inositol catabolism 0.0195389600 14 1.243613e-04 3.022247e-03 0.1030064000 0.2951849000 5.680754e-03 0 14 18 TRUE FALSE -198 3.7320848 3.0664073 1.4170407 2.8756897 1.7726334 0.8720342 1.1455895 1.1589923 N 0.9470624 0.9514708 34.553333 0.20937660 0.9318757 0.22088884 0.78366932 TRUE 0.5217482 0.79806220 TRUE 0.551194697 0.9514708 0.8095576 0.8835813 0 0.27566033 0.24308000 0.1867608 0.7761652 0.5423423 0.943418296 0.77293481 0.16741875 0.77743431 0.41412983 -0.28730811 0.13186000 0.396617773 0.58305566 0.2282587 1423 33 40547 40548 1 464 Same + + 0.000000 0.00000000 0.0000000 -0.3389754 1.407045 3.103603 1.0464750 362 6-phosphogluconate dehydrogenase G 6-phosphogluconate dehydrogenase 1.179058 2.546021 0.7149450 450 Peroxiredoxin O alkyl hydroperoxide reductase (small subunit) 0.0106425200 14 5.197774e-02 3.336776e-03 0.2997563000 0.1841868000 6.468649e-01 0 14 20 FALSE FALSE -196 0.7068768 0.4726689 0.7887573 0.6309360 1.7726334 0.7582521 1.0787322 0.9604279 N 0.9470624 0.6708071 39.206667 0.06012809 0.3445392 0.06409946 0.03253393 FALSE 0.5002389 0.03256402 FALSE 0.020376810 0.6708071 0.2451850 0.4409728 0 0.05970474 0.05307259 0.2392709 0.3071494 0.5311544 -0.808568090 -0.96749946 -0.60417980 -0.99482510 0.42236114 -0.44290788 0.17903724 -0.119102955 0.15124352 0.2282587