#gi	CAI	CAI_Alm	CBI	COG	COGanno	COGfun	Annotation
8561	1.44466081168187	2.37857181868652	0.83347825458394	436	Aspartate/tyrosine/aromatic aminotransferase	E	aspartate aminotransferase (aspB1)
8562	1.53215107876029	2.47925072781901	0.860992492497028	3541	Predicted nucleotidyltransferase	R	M. jannaschii predicted coding region MJ0002
8563	1.42007008730203	2.27559557593142	0.823465103115335	5418	Predicted secreted protein	S	M. jannaschii predicted coding region MJ0003
8564	1.40059539980118	2.32116481741182	0.834970772366079	1924	Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)	I	(R)-2-hydroxyglutaryl-CoA dehydratase activator
8565	1.50720309344623	2.43932312755345	0.864030203187694	1035	Coenzyme F420-reducing hydrogenase, beta subunit	C	formate dehydrogenase, beta subunit
8566	1.49120018692	2.44044552126169	0.877602850617408	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	formate dehydrogenase, alpha subunit
8567	1.44972919982759	2.32999911966508	0.839907408453802	1775	Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB	E	2-hydroxyglutaryl-CoA dehydratase, subunit beta (hgdB)
8568	1.62975806906522	2.60916125868738	0.881072789423304	1082	Sugar phosphate isomerases/epimerases	G	M. jannaschii predicted coding region MJ0008
8569	1.62126367247218	2.60719935777665	0.868083982831204	-	-	-	M. jannaschii predicted coding region MJ0009
8570	1.59282146321377	2.58579961381699	0.92092946350132	3635	Predicted phosphoglycerate mutase, AP superfamily	G	BcpC phosphonopyruvate decarboxylase
8571	1.46251645489577	2.39891007096106	0.865520998678781	-	-	-	M. jannaschii predicted coding region MJ0011
8572	1.97116679874391	3.09064863025724	0.948997282765787	675	Transposase and inactivated derivatives	L	transposase-related protein
8573	1.75090432131445	2.77166156062082	0.946774168610897	675	Transposase and inactivated derivatives	L	M. jannaschii predicted coding region MJ0013
8574	1.80130014321932	2.93343134566817	0.925038478627598	2452	Predicted site-specific integrase-resolvase	L	conserved hypothetical protein
8575	1.84430004675773	2.90447354207749	0.967073424909826	241	Histidinol phosphatase and related phosphatases	E	conserved hypothetical protein
8576	2.09164748040602	3.48545024894177	1.07905919108659	-	-	-	M. jannaschii predicted coding region MJ0016
8577	1.9500028286101	3.18139287552218	0.96382120262122	3316	Transposase and inactivated derivatives	L	transposase, similar to IS240
8578	1.40838458165628	2.41851022937997	0.838552898866784	-	-	-	M. jannaschii predicted coding region MJ0018
8579	1.3790338653641	2.22936017048258	0.785631156949526	2511	Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain)	J	Glu-tRNA amidotransferase (gatB)
8580	1.41392988315565	2.343894748	0.846427689705765	252	L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D	EJ	asparaginase (ansA)
8581	1.42624146705047	2.29723367442124	0.836553765594292	2108	Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme	R	conserved hypothetical protein
8582	1.35072678970746	2.2419850095213	0.804035216810446	1903	Cobalamin biosynthesis protein CbiD	H	cobalamin biosynthesis protein (cbiD)
8583	1.44279969107582	2.40461579522535	0.863228498465182	-	-	-	M. jannaschii predicted coding region MJ0023
8584	1.36338224204263	2.13312018694201	0.795742382498213	1371	Uncharacterized conserved protein	S	conserved hypothetical protein
8585	1.44614139508304	2.3968808348421	0.859537846260786	430	RNA 3'-terminal phosphate cyclase	A	hypothetical protein
8586	1.32949891563635	2.16546069768947	0.770802575718283	144	tRNA and rRNA cytosine-C5-methylases	J	proliferating-cell nucleolar antigen, FMU/NOL1/NOP2 family
8587	1.4757334475767	2.45811556769843	0.860947107024518	-	-	-	M. jannaschii predicted coding region MJ0027
8588	1.6141136074432	2.64068139648851	0.910792375240574	611	Thiamine monophosphate kinase	H	thiamine monphosphate kinase (thiL)
8589	1.44506984263438	2.35470224907871	0.823289218548028	3259	Coenzyme F420-reducing hydrogenase, alpha subunit	C	coenzyme F420-reducing hydrogenase, alpha subunit, selenocysteine-containing
8590	1.42336502092991	2.32182175786568	0.845286220414096	680	Ni,Fe-hydrogenase maturation factor	C	coenzyme F420-reducing hydrogenase, delta subunit (frcD)
8591	1.47149554120949	2.45424442791831	0.890206059442206	1941	Coenzyme F420-reducing hydrogenase, gamma subunit	C	coenzyme F420-reducing hydrogenase, gamma subunit
8592	1.4518564714191	2.35391850233944	0.859339701271709	1035	Coenzyme F420-reducing hydrogenase, beta subunit	C	coenzyme F420-reducing hydrogenase, beta subunit (frhB)
8593	1.41228498966771	2.28295260993172	0.801091930876768	1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	C	succinate dehydrogenase, flavoprotein subunit (sdhA)
8594	1.45505392161915	2.45236374522184	0.87491426712317	719	ABC-type transport system involved in Fe-S cluster assembly, permease component	O	conserved hypothetical protein
8595	1.49238449803859	2.42008685471988	0.859460999577434	396	ABC-type transport system involved in Fe-S cluster assembly, ATPase component	O	ABC transporter subunit
8596	1.74964141363002	2.81123088098951	0.856778061743523	184	Ribosomal protein S15P/S13E	J	SSU ribosomal protein S15P (rpsO)
8597	1.49406338020909	2.39319415836123	0.830232937950069	1407	Predicted ICC-like phosphoesterases	R	conserved hypothetical protein
8598	1.44996086836501	2.23294747349217	0.814556254633843	1491	Predicted RNA-binding protein	J	conserved hypothetical protein
8599	1.34840220473703	2.21321743721801	0.901957084929562	1460	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8600	1.32708669940421	2.08866068455889	0.892391198691786	2139	Ribosomal protein L21E	J	LSU ribosomal protein L21E
8601	1.42534371265078	2.27139192106448	0.816816453605269	1258	Predicted pseudouridylate synthase	J	conserved hypothetical protein
8602	1.41680857361069	2.27900582715903	0.814643632384103	-	-	-	M. jannaschii predicted coding region MJ0042
8603	1.45784500934817	2.33182393141312	0.830980778886646	1372	Intein/homing endonuclease	L	intein containing hypothetical protein
8604	1.42775782196525	2.32486842535493	0.862200039889198	1608	Predicted archaeal kinase	R	conserved hypothetical protein
8605	1.43235348026808	2.26075233422439	0.799047215775325	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein
8606	1.3849936180519	2.25024013906223	0.818160764894944	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein
8607	1.48272867922124	2.43219213382387	0.838003554585753	1236	Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	putative mRNA 3'-end processing factor 1
8608	2.27828269039544	3.7565994287562	1.02174637412606	-	-	-	M. jannaschii predicted coding region MJ0047.1
8609	1.59360985093461	2.68517356065999	0.943470850616801	1976	Translation initiation factor 6 (eIF-6)	J	conserved hypothetical protein
8610	1.31887502696272	2.12513550066163	0.902720042047153	2097	Ribosomal protein L31E	J	LSU ribosomal protein L31E
8611	1.51774156022688	2.43986995340327	0.857343196529981	76	Glutamate decarboxylase and related PLP-dependent proteins	E	group II decarboxylase
8612	1.50077199424351	2.44224145884985	0.907718821532047	1990	Uncharacterized conserved protein	S	conserved hypothetical protein
8613	1.474176167492	2.41408312394438	0.875092969003053	2603	Predicted ATPase	R	conserved hypothetical protein
8614	1.37556439954096	2.2201946612312	0.827571777457554	2603	Predicted ATPase	R	M. jannaschii predicted coding region MJ0053
8615	1.34350403776448	2.23059157089403	0.797741112483848	4022	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8616	1.42652471867419	2.3259696396381	0.819517231195553	108	3,4-dihydroxy-2-butanone 4-phosphate synthase	H	GTP cyclohydrolase II (ribA)
8617	1.49662396158126	2.38757080776153	0.856192791593261	1339	Transcriptional regulator of a riboflavin/FAD biosynthetic operon	KH	conserved hypothetical protein
8618	1.61588248910447	2.74851560382965	0.976822878289639	25	NhaP-type Na+/H+ and K+/H+ antiporters	P	Na+/H+ antiporter
8619	1.46595127680693	2.49346739355649	0.900749672812282	4	Ammonia permease	P	ammonium transporter (amtB)
8620	1.46180763996849	2.32920258888255	0.943458876840595	347	Nitrogen regulatory protein PII	E	nitrogen regulatory protein P-II (glnB)
8621	1.41867911445469	2.26945039040052	0.814464644668207	5	Purine nucleoside phosphorylase	F	methylthioadenosine phosphorylase (mtaP)
8622	1.26095552820472	2.0160737328402	0.841840713083176	1146	Ferredoxin	C	ferredoxin
8623	1.46076104621436	2.39876225371675	0.885605883832427	9	Putative translation factor (SUA5)	J	hypothetical protein
8624	1.49045333724134	2.5076743659409	0.842995260394499	-	-	-	M. jannaschii predicted coding region MJ0063
8625	1.44723384788856	2.55991298159959	0.904757270067952	-	-	-	M. jannaschii predicted coding region MJ0064
8626	1.35862550441734	2.22036879153224	0.781122316860098	4069	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8627	1.42401873803259	2.24261746937157	0.780900767688548	175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related e	EH	sulfate adenylate transferase, subunit 2 (cysD)
8628	1.80666819911104	3.13377357798349	1.03336304187093	2383	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0067
8629	1.5034706488696	2.46517162795153	0.958612145727155	1885	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8630	1.52782740376019	2.52681765037171	0.889994231058935	548	Acetylglutamate kinase	E	acetylglutamate kinase (argB)
8631	1.35716687712613	2.25883207626495	0.905542122915236	-	-	-	M. jannaschii predicted coding region MJ0070
8632	1.37661003726188	2.13606234565121	0.846554728644165	2026	Cytotoxic translational repressor of toxin-antitoxin stability system	JD	conserved hypothetical protein
8633	1.42874688308945	2.47245315207701	1.04893666082001	4087	Soluble P-type ATPase	R	M. jannaschii predicted coding region MJ0072
8634	1.35540015843403	2.24249690334643	0.836966776990332	4087	Soluble P-type ATPase	R	M. jannaschii predicted coding region MJ0073
8635	1.46353385239472	2.31576107770827	0.814476300822924	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0074
8636	1.61433712719697	2.56037096975192	0.908006062277109	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0075
8637	1.502813930675	2.46164772131952	0.873289628455264	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	conserved hypothetical protein
8638	1.54813310059091	2.57535716634163	0.951236714096736	-	-	-	conserved hypothetical protein)
8639	1.47335373995701	2.38980363420779	0.871032232257674	-	-	-	M. jannaschii predicted coding region MJ0078
8640	1.50226051827762	2.4661121804938	0.894817947909157	714	MoxR-like ATPases	R	regulatory protein, putative (moxR)
8641	1.75711438041417	3.03696589694564	1.00163364087378	864	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-bin	K	conserved hypothetical protein
8642	1.50624610374255	2.50049722745766	0.891069117512492	4054	Methyl coenzyme M reductase, beta subunit	H	methyl coenzyme M reductase II, subunit beta (mrtB)
8643	1.52512836245787	2.38647398175909	0.848570864419017	4057	Methyl coenzyme M reductase, gamma subunit	H	methyl coenzyme M reductase II, subunit gamma (mtrG)
8644	1.47738234316315	2.40870294048291	0.835852025502505	4058	Methyl coenzyme M reductase, alpha subunit	H	methyl coenzyme M reductase II, subunit alpha (mtrA)
8645	1.45267467453889	2.37423601306251	0.838173611284757	3640	CO dehydrogenase maturation factor	D	CODH nickel-insertion accessory protein (cooC)
8646	1.43665589949963	2.28212443722262	0.831512147982769	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	iron transport periplasmic binding protein, putative (ceuE)
8647	1.56588155143024	2.52913497714768	0.862523435216762	500	SAM-dependent methyltransferases	QR	unspecified methyltransferase
8648	1.63076801957211	2.76761797888422	0.955474339784714	609	ABC-type Fe3+-siderophore transport system, permease component	P	hemin permease (hemU)
8649	1.41555051560869	2.26669037767555	0.842203194781683	-	-	-	M. jannaschii predicted coding region MJ0088
8650	1.45346483014818	2.37090618141999	0.870285686302919	1120	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	PH	ferric enterobactin transport ATP-binding protein
8651	1.43858981358624	2.31626804019984	0.825220725774895	826	Collagenase and related proteases	O	collagenase (prtC)
8652	1.64060261191346	2.83996843027169	1.00223396917138	530	Ca2+/Na+ antiporter	P	Na+/Ca+ exchanger protein, putative
8653	1.50876303612884	2.40967220104862	0.85731704443923	479	Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit	C	heterodisulfide reductase, subunit D (hdrD)
8654	1.34451751353859	2.13470054683162	0.846804338883849	-	-	-	M. jannaschii predicted coding region MJ0093
8655	1.47740256059832	2.35902947579659	0.872533787831978	4052	Uncharacterized protein related to methyl coenzyme M reductase subunit C	R	methyl coenzyme M reductase II, operon protein C (mtrC)
8656	1.40998407794489	2.29005222734798	0.863926635259981	4921	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0095
8657	1.5420250065716	2.62569931874336	0.872647553578534	-	-	-	M. jannaschii predicted coding region MJ0096
8658	1.44487165908434	2.32134821510454	0.880623502369728	1601	Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain	J	translation initiation factor aIF-2, subunit beta, putative (aIF2B)
8659	1.30155114794363	2.03142737361432	0.899541088459221	2126	Ribosomal protein L37E	J	LSU ribosomal protein L37E
8660	1.50919109999032	2.43676369830172	0.91801968537921	1145	Ferredoxin	C	ferredoxin II
8661	1.4531389289314	2.38140138070486	0.838026431176741	1900	Uncharacterized conserved protein	S	conserved hypothetical protein
8662	1.43733243082379	2.39838587584446	0.867324878612806	541	Signal recognition particle GTPase	U	signal recognition particle, subunit SRP54
8663	1.45514151157421	2.41468168197839	0.864060699270703	163	3-polyprenyl-4-hydroxybenzoate decarboxylase	H	Phenylacrylic acid decarboxylase
8664	1.49600762770996	2.39978608049937	0.84371772353622	2100	Predicted Fe-S oxidoreductase	R	conserved hypothetical protein
8665	1.47103693184809	2.3686327282514	0.851142655208794	1112	Superfamily I DNA and RNA helicases and helicase subunits	L	DNA-binding protein, probably DNA helicase
8666	1.59983710034508	2.63420075093101	0.915545537046041	1935	Uncharacterized conserved protein	S	conserved hypothetical protein
8667	1.54307966990046	2.5229590830203	0.905105501564542	1938	Archaeal enzymes of ATP-grasp superfamily	R	conserved hypothetical protein
8668	1.40994503240259	2.31726985755996	0.823283596689445	294	Dihydropteroate synthase and related enzymes	H	dihydropteroate synthase
8669	1.43312289164772	2.35436573523943	0.841822568164366	469	Pyruvate kinase	G	pyruvate kinase
8670	1.38906225313822	2.26181758517622	0.795613045223406	483	Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family	G	extragenic suppressor (suhB)
8671	1.69668728972088	2.88506049459173	1.01261762620123	4095	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0110
8672	1.45462636663088	2.47571323288705	0.902559408691758	342	Preprotein translocase subunit SecD	U	protein translocase, subunit SECD (secD)
8673	1.41718507364533	2.31540040186094	0.813000352205952	1456	CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)	C	acetyl-CoA decarbonylase/synthase, subunit gamma (cdhE)
8674	1.38159915195895	2.24227939199367	0.794721788222772	2069	CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)	C	acetyl-CoA decarbonylase/synthase, subunit delta (cdhD)
8675	1.38611852478934	2.31855922015	0.847794658511731	-	-	-	M. jannaschii predicted coding region MJ0114
8676	1.46526212631062	2.36282855439695	0.862987613805031	4008	Predicted metal-binding transcription factor	K	conserved hypothetical protein
8677	1.39461976735319	2.29890615286132	0.849706725716216	1402	Uncharacterized protein, putative amidase	R	conserved hypothetical protein
8678	1.38309747988801	2.12505181915653	0.890975892276648	2260	Predicted Zn-ribbon RNA-binding protein	J	conserved hypothetical protein
8679	1.42173213153286	2.30758149339356	0.849462133882687	1093	Translation initiation factor 2, alpha subunit (eIF-2alpha)	J	translation initiation factor aIF-2, subunit alpha (aif2A)
8680	1.43334319637791	2.27683510145038	0.836168398425222	4055	Methyl coenzyme M reductase, subunit D	H	methyl coenzyme M reductase II, operon protein D (mtrD)
8681	1.43630865288352	2.2551653283464	0.818614781826712	2000	Predicted Fe-S protein	R	carbon monoxide dehydrogenase gamma subunit (cdhE) isolog
8682	1.56333748096237	2.53219920292093	0.912058264633177	378	Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	OK	urease accessory protein (ureG)
8683	1.5414720924909	2.56608151010419	0.937428350203745	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	SN-glycerol-3-phosphate transport ATP-binding protein (ugpC)
8684	1.46523245519415	2.43966602888962	0.869928365352785	1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	J	translation initiation factor aIF-2B, subunit delta, putative
8685	1.35314672224734	2.237397681068	0.853248757351282	1451	Predicted metal-dependent hydrolase	R	M. jannaschii predicted coding region MJ0123
8687	1.34974047408557	2.11788332760698	0.849103503217279	2361	Uncharacterized conserved protein	S	conserved hypothetical protein
8688	1.40869278979292	2.37885230635611	0.889419115720114	1669	Predicted nucleotidyltransferases	R	conserved hypothetical protein
8689	1.33082501024491	2.09630801198455	0.822126350175468	2361	Uncharacterized conserved protein	S	conserved hypothetical protein
8690	1.48884821413858	2.43909397632544	0.877764812626471	1669	Predicted nucleotidyltransferases	R	conserved hypothetical protein
8691	1.54962181173657	2.63428508154969	0.940851415340482	-	-	-	M. jannaschii predicted coding region MJ0129
8693	1.48859224572396	2.47157144668982	0.948080748336867	-	-	-	M. jannaschii predicted coding region MJ0131
8694	1.44092720479407	2.27575787292997	0.6740490960967	286	Type I restriction-modification system methyltransferase subunit	V	type I restriction-modification enzyme 2, M subunit
8695	1.45445187322866	2.36197208284338	0.808694614849604	286	Type I restriction-modification system methyltransferase subunit	V	Type I restriction-modification system, methyltransferase subunit
8696	1.36763632860445	2.21006113108354	0.768350151356202	648	Endonuclease IV	L	conserved hypothetical protein
8697	1.47955296649029	2.36109081693664	0.850652172192033	2519	tRNA(1-methyladenosine) methyltransferase and related methyltransferases	J	L-isoaspartyl protein carboxyl methyltransferase isolog (pimT)
8698	1.46897095745468	2.41637501512278	0.867487004837389	164	Ribonuclease HII	L	ribonuclease HII (rnhB)
8699	1.43791102510237	2.35562293040326	0.863012619903025	1759	ATP-utilizing enzymes of ATP-grasp superfamily (probably carboligases)	R	conserved hypothetical protein
8700	1.41910243487464	2.34887267599346	0.853131037238589	616	Periplasmic serine proteases (ClpP class)	OU	conserved hypothetical protein
8701	1.38344988976881	2.27010540490275	0.81328168180955	1492	Cobyric acid synthase	H	cobyric acid synthase (cbiP)
8702	1.6149497703047	2.68430074882951	0.884751914639323	1226	Kef-type K+ transport systems, predicted NAD-binding component	P	potassium channel protein
8703	1.52804243083054	2.53742486136852	0.891938757316237	1226	Kef-type K+ transport systems, predicted NAD-binding component	P	potassium channel protein
8704	2.08919188589291	3.48234692520833	1.02226168350646	3316	Transposase and inactivated derivatives	L	M. jannaschii predicted coding region MJ0139.1
8705	1.35479678100427	2.23023955518636	0.81137674436736	1648	Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain)	H	conserved hypothetical protein
8706	1.30166534549722	2.1646895639845	0.849730434426026	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein
8707	1.30731083376705	2.1383466345382	0.803282457295174	1895	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein
8708	1.40586490054004	2.29303685468862	0.815182708563282	373	Glutamyl-tRNA reductase	H	glutamyl-tRNA reductase (hemA)
8709	1.3806579338613	2.23975219095692	0.787653176526082	42	tRNA-dihydrouridine synthase	J	conserved hypothetical protein
8710	1.48817245341631	2.44057190135514	0.876220233624083	2429	Uncharacterized conserved protein	S	conserved hypothetical protein
8711	1.61132809470034	2.60210602557219	0.935027432535533	1146	Ferredoxin	C	2-ketoglutarate ferredoxin oxidoreductase, subunit delta (korD)
8712	1.47449183163089	2.37391548833581	0.826726882438008	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0147
8713	1.46950144958403	2.32660020303432	0.833470781000409	130	Pseudouridine synthase	J	centromere/microtubule-binding protein (cbf5)
8714	1.45439121127398	2.32285053503468	0.973629361891863	-	-	-	M. jannaschii predicted coding region MJ0149
8715	1.48043384061164	2.39123670590056	0.87366609193492	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	M. jannaschii predicted coding region MJ0150
8716	1.40681396298529	2.3070244001735	0.87054086206182	1522	Transcriptional regulators	K	transcriptional regulator, putative
8717	1.59524757458183	2.5986552839348	0.914023716293814	1614	CO dehydrogenase/acetyl-CoA synthase beta subunit	C	carbon monoxide dehydrogenase, subunit alpha
8718	1.50138203904335	2.4253655605479	0.87199395607377	1152	CO dehydrogenase/acetyl-CoA synthase alpha subunit	C	acetyl-CoA decarbonylase/synthase, subunit alpha (cdhA)
8719	1.59054948471009	2.67660559969194	0.965664816920639	1880	CO dehydrogenase/acetyl-CoA synthase epsilon subunit	C	acetyl-CoA decarbonylase/synthase, subunit epsilon (cdhB)
8720	1.60938277560146	2.58376948580492	0.923566223771806	1142	Fe-S-cluster-containing hydrogenase components 2	C	formate dehydrogenase, iron-sulfur subunit
8721	1.53273376692167	2.4773080050003	0.888139266085432	1614	CO dehydrogenase/acetyl-CoA synthase beta subunit	C	acetyl-CoA decarbonylase/synthase, subunit beta (cdhC)
8722	1.50814164245924	2.33117682779092	0.844629564746446	4014	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0157
8723	1.43996425588092	2.3724953696787	0.860548378922255	1921	Selenocysteine synthase [seryl-tRNASer selenium transferase]	E	selenocystein synthase (selA)
8724	1.50713999797628	2.44534526472619	0.874790957649753	1693	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8725	1.46595902910472	2.35465307532176	0.855255301327581	64	Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog)	J	Glu-tRNA amidotransferase (gatB)
8726	1.41419938310503	2.41231475952522	0.90808247434162	440	Acetolactate synthase, small (regulatory) subunit	E	acetolactate synthase small subunit (ilvN)
8727	1.43440570819546	2.3619708527038	0.864786793934302	1236	Predicted exonuclease of the beta-lactamase fold involved in RNA processing	J	putative mRNA 3'-end processing factor 3
8728	1.54815394806023	2.57231829522108	0.906330963061655	-	-	-	M. jannaschii predicted coding region MJ0163
8729	1.39608519692129	2.2603903507873	0.792625204255865	1667	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0164
8730	1.52129862281252	2.53333059151459	0.896344314239296	1691	NCAIR mutase (PurE)-related proteins	R	conserved hypothetical protein
8731	1.38796547115906	2.26100536187683	0.813821154122507	1650	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8732	1.38954194472258	2.28919880181189	0.82680516506767	521	Molybdopterin biosynthesis enzymes	H	molybdenum cofactor biosynthesis protein (moaB)
8733	1.28276415748955	2.17317009927	0.979918826001062	2036	Histones H3 and H4	B	archaeal histone A1
8734	1.41703384679457	2.38070758567673	0.859541133843562	455	ATPases involved in chromosome partitioning	D	cell division inhibitor minD
8735	1.60276572191661	2.62759660192161	0.922381883254045	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein
8736	1.40611736411722	2.2606213355166	0.790968704985619	1793	ATP-dependent DNA ligase	L	DNA ligase (lig)
8737	1.50817405083656	2.43088948028448	0.872037482634823	2518	Protein-L-isoaspartate carboxylmethyltransferase	O	L-isoaspartyl protein carboxyl methyltransferase
8738	1.44272822858105	2.38321014817807	0.880777538360787	1356	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8739	1.38005639043796	2.29211788207569	0.827949146625251	1537	Predicted RNA-binding proteins	R	cell division protein pelota (pelA)
8740	1.45534370294622	2.33060819325665	0.862725587581405	2178	Predicted RNA-binding protein of the translin family	J	conserved hypothetical protein
8741	1.36617124795761	2.18482510937511	0.742174986823844	87	Ribosomal protein L3	J	LSU ribosomal protein L3P (rplC)
8742	1.28034830048113	2.09757308292533	0.769460545278591	88	Ribosomal protein L4	J	LSU ribosomal protein L4P (rplD)
8743	1.40135916942763	2.24902610355962	0.942018825933398	89	Ribosomal protein L23	J	LSU ribosomal protein L23P (rplW)
8744	1.34200686300767	2.16387703548594	0.76656102263142	90	Ribosomal protein L2	J	LSU ribosomal protein L2P (rplB)
8745	1.38529032796791	2.21386034368963	0.839691778928838	185	Ribosomal protein S19	J	SSU ribosomal protein S19P (rpsS)
8746	1.40416473692003	2.21094178078832	0.765021442292798	-	-	-	M. jannaschii predicted coding region MJ0181
8747	1.36945096373388	2.26020535506595	0.794213094079166	4928	Predicted P-loop ATPase	R	M. jannaschii predicted coding region MJ0182
8748	1.46553523091939	2.29942251725637	0.98343914365693	-	-	-	M. jannaschii predicted coding region MJ0183
8749	1.55892649226525	2.47510736482628	0.959439900300507	-	-	-	M. jannaschii predicted coding region MJ0184
8750	1.50221403875914	2.72890871614552	1.03179185138769	-	-	-	M. jannaschii predicted coding region MJ0185
8751	1.39515735395151	2.29469148128343	0.824970730578488	1364	N-acetylglutamate synthase (N-acetylornithine aminotransferase)	E	glutamate N-acetyltransferase (argJ)
8752	1.30542345269633	2.14803368209793	0.854142088715732	1617	Uncharacterized conserved protein	S	conserved hypothetical protein
8753	1.52701303375129	2.45213391329222	0.855788763593351	1475	Predicted transcriptional regulators	K	inosine-5'-monophosphate dehydrogenase, putative
8754	1.36875763804249	2.18889413351772	0.855662514737317	99	Ribosomal protein S13	J	SSU ribosomal protein S13P (rpsM)
8755	1.37542874058502	2.19336752302068	0.810404863767681	522	Ribosomal protein S4 and related proteins	J	SSU ribosomal protein S4P (rpsD)
8756	1.36845118464907	2.29090761992705	0.847740576436231	100	Ribosomal protein S11	J	SSU ribosomal protein S11P (rpsK)
8757	1.25562464997196	2.1194943278846	0.773495020415875	202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	K	DNA-directed RNA polymerase, subunit D (rpoD)
8758	1.33141208625669	2.2103910907904	0.901009946847236	1727	Ribosomal protein L18E	J	LSU ribosomal protein L18E
8759	1.44532829041011	2.3031497953425	0.855702481523588	102	Ribosomal protein L13	J	LSU ribosomal protein L13P (rplM)
8760	1.39061833834845	2.29109438024822	0.875628421822327	103	Ribosomal protein S9	J	SSU ribosomal protein S9P (rpsI)
8761	1.37804860116878	2.16122741635898	0.914159188864618	1644	DNA-directed RNA polymerase, subunit N (RpoN/RPB10)	K	DNA-directed RNA polymerase, subunit N (rpoN)
8762	1.34434732870858	2.35026391128536	0.99601316764614	1758	DNA-directed RNA polymerase, subunit K/omega	K	DNA-directed RNA polymerase, subunit K (rpoK)
8763	1.43692146021521	2.40338969316854	0.867138936863346	148	Enolase	G	M. jannaschii predicted coding region MJ0198
8764	1.45825270133524	2.29838408308345	0.988318227430256	1146	Ferredoxin	C	ferredoxin
8765	1.29335380561905	2.15605039521696	0.908821921252574	298	Hydrogenase maturation factor	O	hydrogenase expression/formation protein (hypC)
8766	1.3566217310643	2.20309002038152	0.82340423612246	1238	Predicted membrane protein	S	lipoprotein B (lppB)
8767	1.46994616572752	2.40223153923585	0.879261489163903	1578	Uncharacterized conserved protein	S	conserved hypothetical protein
8768	1.42940970556202	2.34201827369056	0.855317543245182	150	Phosphoribosylaminoimidazole (AIR) synthetase	F	phosphoribosylformylglycinamidine cyclo-ligase (purM)
8769	1.44412299821326	2.39628019533059	0.861575350189716	34	Glutamine phosphoribosylpyrophosphate amidotransferase	F	amidophosphoribosyltransferase (purF)
8770	1.47542668050543	2.42550838252757	0.88536344364383	136	Aspartate-semialdehyde dehydrogenase	E	aspartate-semialdehyde dehydrogenase (asd)
8771	1.32665152429457	2.19786169545147	0.8649685438177	2090	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8772	1.3879654024727	2.31326776337035	0.87484192706096	-	-	-	M. jannaschii predicted coding region MJ0207
8773	1.46834603599193	2.38955079015048	0.838885280113425	1036	Archaeal flavoproteins	C	4Fe-4S iron-sulfur protein
8774	1.33919777139799	2.20256128483352	0.797047595966861	1701	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8775	1.35866276485274	2.1965991608722	0.787961967965603	45	Succinyl-CoA synthetase, beta subunit	C	succinyl-CoA synthetase, beta subunit
8776	1.52148341581627	2.54122945896929	0.936641322041177	-	-	-	M. jannaschii predicted coding region MJ0210.1
8777	1.37720697779524	2.21262196978346	0.801391585140777	451	Nucleoside-diphosphate-sugar epimerases	MG	UDP-glucose 4-epimerase (galE)
8778	1.61888717477985	2.62680638734592	0.975566464500356	1581	Archaeal DNA-binding protein	K	conserved hypothetical protein
8779	1.42609929435747	2.24206504618476	0.804810539561748	1325	Predicted exosome subunit	J	M. jannaschii predicted coding region MJ0213
8780	1.32610843214109	2.16984065448073	0.840623603044987	375	Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)	R	hydrogenase expression/formation protein (hypA)
8781	1.54414527537792	2.47025654219154	0.8637121755344	2453	Predicted protein-tyrosine phosphatase	T	M. jannaschii predicted coding region MJ0215
8782	1.4185292403596	2.33143672566041	0.775715701362727	1156	Archaeal/vacuolar-type H+-ATPase subunit B	C	H+-transporting ATP synthase, subunit B (atpB)
8783	1.3806923178145	2.25522719953912	0.774520400223587	1155	Archaeal/vacuolar-type H+-ATPase subunit A	C	H+-transporting ATP synthase, subunit A (atpA)
8784	1.55286855861765	2.54399534712313	0.976673455058991	1436	Archaeal/vacuolar-type H+-ATPase subunit F	C	H+-transporting ATP synthase, subunit F (atpF)
8785	1.49229933784362	2.49379261315307	0.892658113543802	1527	Archaeal/vacuolar-type H+-ATPase subunit C	C	H+-transporting ATP synthase, subunit C (atpC)
8786	1.39269004731455	2.34067541025048	0.829475987240958	1390	Archaeal/vacuolar-type H+-ATPase subunit E	C	H+-transporting ATP synthase, subunit E (atpE)
8787	1.68844222177341	2.97235551243361	1.00513395848331	636	F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	C	H+-transporting ATP synthase, subunit K (atpK)
8788	1.54679862769437	2.59560337931687	0.921897816860268	1269	Archaeal/vacuolar-type H+-ATPase subunit I	C	H+-transporting ATP synthase, subunit I (atpI)
8789	1.39678440117995	2.4859825561804	0.894186190127239	2811	Archaeal/vacuolar-type H+-ATPase subunit H	C	M. jannaschii predicted coding region MJ0223
8790	1.58408134876893	2.58863051099897	0.884548329747544	1772	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8791	1.44038459964838	2.3168452527076	0.807008671841289	1637	Predicted nuclease of the RecB family	L	conserved hypothetical protein
8792	1.30458048052868	2.13304950654072	0.784191700284443	127	Xanthosine triphosphate pyrophosphatase	F	conserved hypothetical protein
8793	1.54920227393808	2.52854415662544	0.849294085639319	-	-	-	M. jannaschii predicted coding region MJ0226.1
8794	1.43321885838126	2.27867148020353	0.845594813680572	-	-	-	M. jannaschii predicted coding region MJ0226.2
8795	1.3619023995805	2.2279782577013	0.765098622010054	1767	Triphosphoribosyl-dephospho-CoA synthetase	H	conserved hypothetical protein
8796	1.35736254747193	2.17509459282216	0.76528761429021	423	Glycyl-tRNA synthetase (class II)	J	glycyl-tRNA synthetase (glyS)
8797	1.35927961937318	2.19207312353274	0.922610762570576	640	Predicted transcriptional regulators	K	arsenical resistance operon repressor
8798	1.72924482509217	2.91786237034383	1.00050754093201	-	-	-	M. jannaschii predicted coding region MJ0230
8799	1.39711828722799	2.30839020710825	0.820257923166371	312	Predicted Zn-dependent proteases and their inactivated homologs	R	pmbA protein (pmbA)
8800	1.36759119863921	2.2637522372128	0.816238804592966	148	Enolase	G	enolase (eno)
8801	1.45856459433794	2.52916411258619	0.909840993639192	-	-	-	M. jannaschii predicted coding region MJ0233
8802	1.49854433768564	2.50258591331613	0.898789159191459	547	Anthranilate phosphoribosyltransferase	E	anthranilate synthase component II (trpD)
8803	1.32029070682532	2.12534841698499	0.882723280115181	-	-	-	M. jannaschii predicted coding region MJ0235
8804	1.44247937237526	2.36735863594206	0.835439618910786	1992	Uncharacterized conserved protein	S	conserved hypothetical
8805	1.40958721010591	2.2919651647237	0.824746977471767	18	Arginyl-tRNA synthetase	J	arginyl-tRNA synthetase (argS)
8806	1.45152634395271	2.33919524079116	0.868623457484328	512	Anthranilate/para-aminobenzoate synthases component II	EH	anthranilate synthase component II (trpG)
8807	1.48964327040522	2.37147025573607	0.871937939902228	-	-	-	M. jannaschii predicted coding region MJ0239
8808	1.41514618902221	2.24888679500622	0.85032313930221	1437	Adenylate cyclase, class 2 (thermophilic)	F	conserved hypothetical protein
8809	1.45825675221885	2.39125425387815	0.913164700674088	1959	Predicted transcriptional regulator	K	M. jannaschii predicted coding region MJ0241
8810	1.49157379104508	2.21366451088042	1.13970256727047	-	-	-	LSU ribosomal protein L41E
8811	1.50322601618216	2.4448734645694	0.911812973166508	721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	J	conserved hypothetical protein
8812	1.5779947189629	2.62487402828311	0.938854617156933	329	Dihydrodipicolinate synthase/N-acetylneuraminate lyase	EM	dihydrodipicolinate synthase (dapA)
8813	1.24235401608623	2.00531801738478	0.95578235102188	1383	Ribosomal protein S17E	J	SSU ribosomal protein S17E
8814	1.47765507438798	2.37685281867301	0.892451009046036	1605	Chorismate mutase	E	chorismate mutase/prephenate dehydratase (pheA)
8815	1.39050914244023	2.3210278758885	0.882825656132715	592	DNA polymerase sliding clamp subunit (PCNA homolog)	L	proliferating-cell nuclear antigen (pol30)
8816	1.48851547524969	2.33948544399183	0.840909862893233	-	-	-	M. jannaschii predicted coding region MJ0248
8817	1.52912715814933	2.36055472455598	0.90301763830325	1631	Ribosomal protein L44E	J	LSU ribosomal protein L44E
8818	1.42892635953377	2.28423979203317	0.97007080979721	2051	Ribosomal protein S27E	J	SSU ribosomal protein S27E
8819	1.37169148765488	2.16076642370354	0.820164615885106	1146	Ferredoxin	C	ferredoxin II
8820	1.36922662926297	2.22034131435593	0.826038283205429	284	Orotidine-5'-phosphate decarboxylase	F	conserved hypothetical protein
8821	1.49231372662087	2.38892578096838	0.821984511848887	680	Ni,Fe-hydrogenase maturation factor	C	coenzyme F420-reducing hydrogenase, delta subunit (frcD)
8822	1.51783017571716	2.54069710972809	0.907034721673332	468	RecA/RadA recombinase	L	DNA repair protein REC
8823	1.43969750071671	2.29358350937994	0.815537567278145	1809	Uncharacterized conserved protein	S	conserved hypothetical protein
8824	1.49861399535286	2.50221586220891	0.897219701990595	4032	Predicted thiamine-pyrophosphate-binding protein	R	Uncharacterized protein
8825	1.45932975439073	2.45881811482696	0.856858772479483	28	Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome)	EH	conserved hypothetical protein
8826	1.4641521395846	2.36298485487378	0.839937324730769	731	Fe-S oxidoreductases	C	conserved hypothetical protein
8827	1.38999768403868	2.22398209849966	0.773592822784182	770	UDP-N-acetylmuramyl pentapeptide synthase	M	conserved hypothetical protein
8828	1.47324883063203	2.49110369833999	0.872588638654445	-	-	-	M. jannaschii predicted coding region MJ0259
8829	1.54395248815977	2.44146516690098	0.890179689505232	681	Signal peptidase I	U	signal sequence peptidase I, SEC11
8830	1.44079246166915	2.37774165068451	0.8547949528557	1986	Uncharacterized conserved protein	S	conserved hypothetical protein
8831	1.41761135020053	2.28330330835619	0.815903051527424	1372	Intein/homing endonuclease	L	translation initiation factor aIF-2 (infB)
8832	1.35364212503513	2.19227568380692	0.73786313171296	457	FOG: TPR repeat	R	conserved hypothetical protein
8833	1.47348123938217	2.34243035888852	0.852229522212595	1142	Fe-S-cluster-containing hydrogenase components 2	C	carbon monoxide dehydrogenase, iron sulfur subunit CooF-1 (cooF1)
8834	1.46010244816215	2.37918432516013	0.894117091356242	1142	Fe-S-cluster-containing hydrogenase components 2	C	carbon monoxide dehydrogenase, iron sulfur subunit CooF-1 (cooF2)
8835	1.43909505420151	2.38603507802374	0.886854733744135	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	pyruvate ferredoxin oxidoreductase, subunit beta (porB)
8836	1.40747697379849	2.32899336536235	0.839868941958029	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	pyruvate ferredoxin oxidoreductase, subunit alpha (porA)
8837	1.30068870564094	2.07139557126857	0.889704739257944	1144	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit	C	pyruvate ferredoxin oxidoreductase, subunit delta (porD)
8838	1.25750129649122	2.04761260519496	0.772551899334389	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	pyruvate ferredoxin oxidoreductase, subunit gamma (porG)
8839	1.72338093955941	2.92382172630081	0.950870988894883	-	-	-	M. jannaschii predicted coding region MJ0270
8840	1.38519095551858	2.30515753622633	0.873869141569562	-	-	-	M. jannaschii predicted coding region MJ0271
8841	1.49611144216363	2.48779625116563	0.969621308942083	1476	Predicted transcriptional regulators	K	repressor protein, putative (yorfE)
8842	1.57821181916828	2.51611125994963	0.892588317739871	1849	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0273
8843	1.46750218134743	2.3358085719299	0.819788828664939	1031	Uncharacterized Fe-S oxidoreductase	C	conserved hypothetical protein
8844	1.37433254935175	2.21716809382642	0.803924455446042	-	-	-	M. jannaschii predicted coding region MJ0275
8845	1.52535587954088	2.52260860857567	0.843262155907445	-	-	-	M. jannaschii predicted coding region MJ0275.1
8846	1.38561515840143	2.24433764540245	0.790446680949426	674	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit	C	2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA)
8847	1.45939696073098	2.41145226954257	0.875905456817812	28	Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome)	EH	acetolactate synthase large subunit (ilvB)
8848	1.45715966641364	2.35957402404864	0.866116804005174	1047	FKBP-type peptidyl-prolyl cis-trans isomerases 2	O	peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (slyD)
8849	1.55580695522336	2.60528812321796	0.907144117507548	382	4-hydroxybenzoate polyprenyltransferase and related prenyltransferases	H	4-hydroxybenzoate octaprenyltransferase (ubiA)
8850	1.32304205730976	2.09207486011438	0.838065681668153	1308	Transcription factor homologous to NACalpha-BTF3	K	conserved hypothetical protein
8851	1.41438554835837	2.27925762132251	0.839253765276085	1913	Predicted Zn-dependent proteases	R	conserved hypothetical protein
8852	1.43468053965894	2.34060262607101	0.880302224284442	3576	Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase	R	conserved hypothetical protein
8853	1.42801554708478	2.35447635946283	0.856064098049189	489	ATPases involved in chromosome partitioning	D	nucleotide-binding protein
8854	1.39426966945499	2.18641906571444	0.801528915333294	2263	Predicted RNA methylase	J	conserved hypothetical protein
8855	1.31826774088124	2.28208373380786	0.883764239979214	71	Molecular chaperone (small heat shock protein)	O	small heat shock protein (hsp20)
8856	1.68675056589483	2.76147783910725	0.9407475853091	-	-	-	M. jannaschii predicted coding region MJ0286
8857	1.6970231278127	2.77122901776187	0.928846980288954	3432	Predicted transcriptional regulator	K	conserved hypothetical protein
8858	1.66184523435461	2.79252325866729	0.964968033416183	-	-	-	M. jannaschii predicted coding region MJ0288
8859	1.61346200954643	2.68824557573342	0.889849658747312	-	-	-	M. jannaschii predicted coding region MJ0289
8860	1.40127350191919	2.25427143987055	0.79834009707596	3432	Predicted transcriptional regulator	K	M. jannaschii predicted coding region MJ0290
8861	1.32672603643759	2.19740243725796	0.757337534282754	552	Signal recognition particle GTPase	U	signal recognition particle, receptor
8862	1.556089788848	2.63341234927058	1.01234013933754	1320	Multisubunit Na+/H+ antiporter, MnhG subunit	P	conserved hypothetical protein
8863	1.32645612186945	2.16825224248175	0.817227209784572	125	Thymidylate kinase	F	thymidylate kinase (tmk)
8864	1.44548104785604	2.36155910921036	0.841578433475096	1201	Lhr-like helicases	R	large helicase-related protein (LHR), probably RNA helicase
8865	1.36065840976437	2.25630710029942	0.83285430749309	1526	Uncharacterized protein required for formate dehydrogenase activity	C	formate dehydrogenase (fdhD)
8866	1.44426525845194	2.39556423591435	0.840334037638928	491	Zn-dependent hydrolases, including glyoxylases	R	M. jannaschii predicted coding region MJ0296
8867	1.41192898594989	2.28246555263154	0.80342685450465	-	-	-	M. jannaschii predicted coding region MJ0297
8868	1.52332232991743	2.48108756754532	0.837877143197626	716	Flavodoxins	C	M. jannaschii predicted coding region MJ0298
8869	1.45942450258076	2.33204238052649	0.784168259192857	1980	Archaeal fructose 1,6-bisphosphatase	G	conserved hypothetical protein
8870	1.38294924517504	2.30961030940605	0.855579167595571	583	Transcriptional regulator	K	transcriptional regulator, putative
8871	1.60316425344398	2.64986105012668	0.934320430072493	1237	Metal-dependent hydrolases of the beta-lactamase superfamily II	R	conserved hypothetical protein
8872	1.37640562636674	2.26166538973373	0.907871581782545	140	Phosphoribosyl-ATP pyrophosphohydrolase	E	phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (hisIE)
8873	1.48658600145243	2.37927593347691	0.915563491872574	54	Riboflavin synthase beta-chain	H	riboflavin synthase beta chain (ribH)
8874	1.44603381872475	2.4279445569522	0.902596496257441	663	Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily	R	ferripyochelin binding protein (fbp)
8875	1.54893018295391	2.66149878119484	0.94537767387053	38	Chloride channel protein EriC	P	conserved hypothetical protein
8876	1.52563583892427	2.39853032391378	0.933912617435149	-	-	-	M. jannaschii predicted coding region MJ0306
8877	1.48499046247032	2.43855862706849	0.960157912205405	526	Thiol-disulfide isomerase and thioredoxins	OC	thioredoxin (trx)
8878	1.37193888412661	2.20682830076264	0.77613445168819	2043	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8879	1.49207510936161	2.44489692196345	0.882391061268109	10	Arginase/agmatinase/formimionoglutamate hydrolase, arginase family	E	agmatinase (speB)
8880	1.53866405635189	2.63814694536479	0.995410465247007	2018	Uncharacterized distant relative of homeotic protein bithoraxoid	R	conserved hypothetical protein
8881	1.32005276676409	2.24397064796469	0.874644424458152	-	-	-	M. jannaschii predicted coding region MJ0311
8882	1.53425134045522	2.61010717951571	0.932795633914817	-	-	-	M. jannaschii predicted coding region MJ0312
8883	1.39189563901708	2.20794521827268	0.810013683832576	421	Spermidine synthase	E	spermidine synthase (speE)
8884	1.4773820937034	2.4141996708657	0.845914196708746	3780	DNA endonuclease related to intein-encoded endonucleases	L	M. jannaschii predicted coding region MJ0314
8885	1.58475299075655	2.60049088143603	0.951896470494844	1586	S-adenosylmethionine decarboxylase	E	conserved hypothetical protein
8886	1.41732932280514	2.44512296071537	0.940181829209665	1945	Uncharacterized conserved protein	S	conserved hypothetical protein
8887	1.48333778674787	2.32824086466475	0.844255473134975	-	-	-	M. jannaschii predicted coding region MJ0317
8888	1.32887330845693	2.20192549526414	0.793983294619305	2037	Formylmethanofuran:tetrahydromethanopterin formyltransferase	C	formylmethanofuran:tetrahydromethanopterin formyltransferase (ftr)
8889	1.32879287751737	2.19830572467813	0.887472659132447	1888	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8890	1.45680745747263	2.31163512851265	0.842689981483316	218	Predicted GTPase	R	conserved hypothetical protein
8891	1.55429180019679	2.66854449948766	0.971788245553198	-	-	-	M. jannaschii predicted coding region MJ0321
8892	1.41643768813988	2.33959303404713	0.929362973371525	51	Ribosomal protein S10	J	SSU ribosomal protein S10P (rpsJ)
8893	1.57233981373859	2.54002997552767	0.68225255498932	5256	Translation elongation factor EF-1alpha (GTPase)	J	translation elongation factor EF-1, subunit alpha
8894	1.43041301814622	2.31384639758023	0.862120569920768	3276	Selenocysteine-specific translation elongation factor	J	translation factor EF-1 alpha, putative
8895	1.58116367063478	2.71467210493188	0.984621950685114	2252	Permeases	R	conserved hypothetical protein
8896	1.2488720895069	2.09726216001385	0.846657479405266	1433	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0327
8897	1.62730437294739	2.68047340154114	0.970553663314642	-	-	-	M. jannaschii predicted coding region MJ0328
8898	1.70272175007335	2.76095494024304	0.921380566576568	2369	Uncharacterized protein, homolog of phage Mu protein gp30	S	M. jannaschii predicted coding region MJ0329
8899	1.72654219814842	2.7728676173375	0.89305107917301	-	-	-	M. jannaschii predicted coding region MJ0330
8900	1.67277338432118	2.63773375181584	0.89694593795183	-	-	-	M. jannaschii predicted coding region MJ0331
8901	1.62256779046098	2.69917604170407	0.966304616107897	-	-	-	M. jannaschii predicted coding region MJ0332
8902	1.81802192296802	3.01652160219871	0.981141258426485	-	-	-	M. jannaschii predicted coding region MJ0332.1
8903	1.83687015385749	3.07909880208048	1.0003966176138	-	-	-	M. jannaschii predicted coding region MJ0333
8904	1.47871721890082	2.40543380525578	0.897552890139248	-	-	-	M. jannaschii predicted coding region MJ0334
8905	1.8881189641041	3.07207951866671	0.9566588146239	-	-	-	M. jannaschii predicted coding region MJ0335
8906	1.6533542474586	2.9024789594133	0.992068198036425	-	-	-	M. jannaschii predicted coding region MJ0336
8907	1.50852936869898	2.51951540290888	0.860016216642987	-	-	-	M. jannaschii predicted coding region MJ0337
8908	1.63422057839222	2.75176845680974	0.961240790909871	-	-	-	M. jannaschii predicted coding region MJ0338
8909	1.67554568053634	2.72021492387717	0.96534792765771	-	-	-	M. jannaschii predicted coding region MJ0339
8910	1.7216098098867	2.93790959466596	0.980129147051121	-	-	-	M. jannaschii predicted coding region MJ0340
8911	1.58476061081532	2.5828045028132	0.885552427226564	-	-	-	M. jannaschii predicted coding region MJ0341
8912	1.8098521012182	2.99180250349173	1.01904711869202	-	-	-	M. jannaschii predicted coding region MJ0342
8913	1.46408070903216	2.46519294842132	0.880049247867191	-	-	-	M. jannaschii predicted coding region MJ0343
8914	1.52355459385036	2.63219335505586	0.901217802416698	-	-	-	M. jannaschii predicted coding region MJ0344
8915	1.54919006677719	2.64587813493641	0.931560916160811	-	-	-	M. jannaschii predicted coding region MJ0345
8916	1.53235712723091	2.44734338729347	0.924598334886764	-	-	-	M. jannaschii predicted coding region MJ0346
8917	1.45242175160505	2.39385476400929	0.87054855307588	-	-	-	conserved hypothetical protein
8918	1.45109603469404	2.40133895152386	0.857435292349574	-	-	-	M. jannaschii predicted coding region MJ0347.1
8919	1.67740779157607	2.73824388929551	0.919633196849521	-	-	-	M. jannaschii predicted coding region MJ0348
8920	1.4691721327852	2.41981478877336	0.931632951326171	-	-	-	M. jannaschii predicted coding region MJ0349
8921	1.42377094669629	2.27168356604783	0.929459812289754	-	-	-	M. jannaschii predicted coding region MJ0350
8922	1.68265846683302	2.74585130554247	0.905497251707803	-	-	-	M. jannaschii predicted coding region MJ0351
8923	1.7214440233579	2.82182411738775	0.90101451078171	-	-	-	M. jannaschii predicted coding region MJ0352
8924	2.01552018438136	3.11241227551612	0.876096895387998	-	-	-	M. jannaschii predicted coding region MJ0353
8925	1.70831045415191	2.81232254561741	1.03078031281693	-	-	-	M. jannaschii predicted coding region MJ0354
8926	1.5483743897218	2.49632259132831	0.915708106861223	-	-	-	M. jannaschii predicted coding region MJ0355
8927	1.66574201732061	2.78987932169054	0.966199385128274	-	-	-	M. jannaschii predicted coding region MJ0356
8928	1.49842717775914	2.47906520606299	0.880840842559523	1952	Preprotein translocase subunit SecB	U	M. jannaschii predicted coding region MJ0357
8929	1.37783097481581	2.21555546445096	0.810576313424795	-	-	-	M. jannaschii predicted coding region MJ0358
8930	1.7356433365301	2.74028039154953	0.879796117335424	-	-	-	M. jannaschii predicted coding region MJ0359
8931	1.61569938272666	2.61671014165988	0.935082388114991	-	-	-	M. jannaschii predicted coding region MJ0360
8932	1.44721912716518	2.36948055500924	0.885427129461743	1733	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ0361
8933	1.37011400708752	2.24490927807006	0.952338381955026	3466	Putative transposon-encoded protein	S	M. jannaschii predicted coding region MJ0362
8934	1.55430114607287	2.55102121461027	0.881913411851167	1241	Predicted ATPase involved in replication control, Cdc46/Mcm family	L	cell division control protein 21 (cdc21)
8935	1.5146671734632	2.43348193056414	0.91264074715588	-	-	-	M. jannaschii predicted coding region MJ0364
8936	1.82896673473048	2.89763337416874	0.960268841487503	3359	Predicted exonuclease	L	M. jannaschii predicted coding region MJ0365
8937	1.7932306002906	2.86601327059549	0.980673814973412	-	-	-	M. jannaschii predicted coding region MJ0366
8938	1.7438019568436	2.7908427787079	0.879968241137649	582	Integrase	L	integrase/recombinase
8939	1.57378439977562	2.53898481775615	0.928758829767404	-	-	-	M. jannaschii predicted coding region MJ0368
8940	1.45906623915742	2.37657208352929	0.85304090949724	1697	DNA topoisomerase VI, subunit A	L	DNA topoisomerase VI, subunit A (top6A)
8941	1.44505147847087	2.42286905208043	0.872261566624636	206	Cell division GTPase	D	cell division protein ftsZ
8942	1.26593957391136	2.06126786710598	0.89590180669259	2443	Preprotein translocase subunit Sss1	U	protein translocase, subunit SEC61 gamma (secE)
8943	1.40670699477051	2.34399057480689	0.898920944010012	250	Transcription antiterminator	K	LSU ribosomal protein L24A
8944	1.37383406858064	2.22915426132865	0.848085388761929	80	Ribosomal protein L11	J	LSU ribosomal protein L11P (rplK)
8945	1.39947951057895	2.32162197950176	0.821890819307588	1238	Predicted membrane protein	S	lipoprotein B (lppB)
8946	1.4809906979007	2.34248236367896	0.852988160346986	1583	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	conserved hypothetical protein
8947	1.45098240764664	2.31752223213459	0.814370394478544	1203	Predicted helicases	R	conserved hypothetical protein
8948	1.46303556533108	2.37623764979208	0.857857365482667	1468	RecB family exonuclease	L	conserved hypothetical protein
8949	1.63070228149941	2.60748410426202	0.90919579674854	1518	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein
8950	1.51508799365692	2.47460890223391	0.836091843727806	640	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ0379
8951	1.5979799376541	2.59528973581392	0.927560863123108	-	-	-	M. jannaschii predicted coding region MJ0380
8952	1.47953059293472	2.44156372570964	0.868464865323083	1857	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein
8953	1.6356045826738	2.69119318620591	0.913672466663129	1688	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	M. jannaschii predicted coding region MJ0382
8954	1.57226636113632	2.5336848370724	0.879338955580435	1203	Predicted helicases	R	ATP-dependent RNA helicase, putative
8955	1.56475716784273	2.53714417925381	0.872616766264881	2254	Predicted HD superfamily hydrolase, possibly a nuclease	L	M. jannaschii predicted coding region MJ0384
8956	1.55038782881278	2.54212951985066	0.887305413086735	-	-	-	M. jannaschii predicted coding region MJ0385
8957	1.35182018281897	2.15351192567729	0.870225797507679	1343	Uncharacterized protein predicted to be involved in DNA repair	L	conserved hypothetical protein
8958	1.55029037877189	2.5393725076675	0.957374286729562	1761	DNA-directed RNA polymerase, subunit L	K	DNA-directed RNA polymerase, subunit L (rpoL)
8959	1.36032227039268	2.16862243683512	0.821865685610438	3286	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8960	1.41586066697358	2.29665353942028	0.836561378838903	162	Tyrosyl-tRNA synthetase	J	tyrosyl-tRNA synthetase (trS)
8961	1.34802492671983	2.17182038728396	0.813203640703116	-	-	-	M. jannaschii predicted coding region MJ0390
8962	1.28641491301041	2.09901769169923	0.777421739311666	2242	Precorrin-6B methylase 2	H	cobalamin biosynthesis precorrin-8W decarboxylase (cbiT)
8963	1.61360115914918	2.68070661404605	0.954955092396035	1994	Zn-dependent proteases	R	conserved hypothetical protein
8964	1.53280784294979	2.35311941830771	0.949404545901029	1998	Ribosomal protein S27AE	J	SSU ribosomal protein S27AE
8965	1.32318498698248	2.11899915251091	0.866855020368228	2004	Ribosomal protein S24E	J	SSU ribosomal protein S24E
8966	1.59985110820808	2.57589680166129	0.863261578782186	1909	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8967	1.2878115193019	2.18883447070292	0.97719563872523	2093	DNA-directed RNA polymerase, subunit E''	K	DNA-directed RNA polymerase, subunit E'' (rpoE2)
8968	1.46298524674615	2.34573377444963	0.855589752748823	1095	DNA-directed RNA polymerase, subunit E'	K	DNA-directed RNA polymerase, subunit E' (rpoE1)
8969	1.4574586549943	2.41847750558641	0.845336370583876	3780	DNA endonuclease related to intein-encoded endonucleases	L	M. jannaschii predicted coding region MJ0398
8970	1.39984510190819	2.26254457129289	0.806842902621321	1109	Phosphomannomutase	G	phosphomannomutase (pmmA)
8971	1.51419845348863	2.46451397579299	0.909352624321855	1830	DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes	G	conserved hypothetical protein
8972	1.28728962969232	1.95291539689594	0.912978485415767	-	-	-	M. jannaschii predicted coding region MJ0401
8973	1.39165253565984	2.12808165613526	0.843528681793471	-	-	-	M. jannaschii predicted coding region MJ0402
8974	1.46058843942327	2.41317399557897	0.866606876223361	1355	Predicted dioxygenase	R	conserved hypothetical protein
8975	1.51263399341152	2.46877570731851	0.900904965727923	4050	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8976	1.49052238221502	2.44768927068505	0.881373025040459	4048	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8977	1.56659799567826	2.56288282822695	0.904858797824622	524	Sugar kinases, ribokinase family	G	ribokinase (rbsK)
8978	1.35674639548908	2.22136349521639	0.781201585717438	379	Quinolinate synthase	H	quinolinate synthetase (nadA)
8979	1.5030754351953	2.36768499755076	0.865214129972882	2098	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
8980	1.49299885827208	2.38579171996138	0.83743898917325	-	-	-	M. jannaschii predicted coding region MJ0409
8981	1.60747068606518	2.68219315455147	0.943956680884372	455	ATPases involved in chromosome partitioning	D	hypothetical protein
8982	1.42481985996823	2.32874179418661	0.851860919881686	107	Imidazoleglycerol-phosphate synthase	E	imidazoleglycerol-phosphate synthase, cyclase subunit (hisF)
8983	1.41527864468335	2.25127885253435	0.829964737653113	1116	ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component	P	nitrate transporter protein (nrtC) homolog (cmpC)
8984	1.61270471248903	2.77442167919908	0.999504030197296	600	ABC-type nitrate/sulfonate/bicarbonate transport system, permease component	P	nitrate transporter protein (nrtB) homolog (cmpB)
8985	1.45564539183055	2.31995406282398	0.824153477836014	1423	ATP-dependent DNA ligase, homolog of eukaryotic ligase III	L	conserved hypothetical protein
8986	1.86184738652879	3.01915835802449	0.98235996929739	-	-	-	M. jannaschii predicted coding region MJ0415
8987	1.54583634891634	2.51167759653019	0.868356798979875	-	-	-	M. jannaschii predicted coding region MJ0416
8988	1.51453917208793	2.45067014350518	0.881677919956521	613	Predicted metal-dependent phosphoesterases (PHP family)	R	conserved hypothetical protein
8989	1.38900408404025	2.32142484030437	0.824722778404583	-	-	-	M. jannaschii predicted coding region MJ0418
8990	1.55002577849322	2.5982340549045	0.905420462244344	1822	Predicted archaeal membrane protein	S	M. jannaschii predicted coding region MJ0419
8991	1.55352368097288	2.58834004686885	0.880331286261959	1822	Predicted archaeal membrane protein	S	O-antigen polymerase isolog
8992	1.29190292564688	2.07452654589972	0.742013851588173	1818	Predicted RNA-binding protein, contains THUMP domain	R	conserved hypothetical protein
8993	1.37223840731962	2.25965312971674	0.804658256720137	289	Dihydrodipicolinate reductase	E	dihydrodipicolinate reductase (dapB)
8994	1.7038523803732	2.68888201058238	0.934661305891224	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein
8995	1.59722266440319	2.56784223328286	0.93023056613357	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0424
8996	1.57324923891861	2.50764171555304	0.897695527794746	1672	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein
8997	1.4303273024235	2.32691087206722	0.842896766515964	-	-	-	M. jannaschii predicted coding region MJ0426
8998	1.70329180179762	2.70410942694289	0.919392571736445	-	-	-	M. jannaschii predicted coding region MJ0427
8999	1.40631154267329	2.29522683466522	0.817726043596609	677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	M	UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase
9000	1.37131670819275	2.23338163160287	0.794382012954109	137	Argininosuccinate synthase	E	argininosuccinate synthetase (argG)
9001	1.37366697815923	2.2429112533003	0.836033644663629	717	Deoxycytidine deaminase	F	deoxycytidine triphosphate deaminase (dcd)
9002	1.34010044157687	2.4006729847397	0.949944020151978	1991	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0431
9003	1.36950649021903	2.20614469733275	0.875697338136399	1846	Transcriptional regulators	K	conserved hypothetical protein
9004	1.27415560615722	2.12828554214023	0.810787481167547	-	-	-	M. jannaschii predicted coding region MJ0433
9005	1.42456874475862	2.23288923295531	0.785081709680423	2361	Uncharacterized conserved protein	S	conserved hypothetical protein
9006	1.54505532680864	2.52521816454545	0.955815415727245	1669	Predicted nucleotidyltransferases	R	conserved hypothetical protein
9007	1.43956713164209	2.29812630231804	0.829021459379325	1370	Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit	O	queuine tRNA-ribosyltransferase (tgtA)
9008	1.5125620808672	2.62414273558809	1.04494860436837	1563	Predicted subunit of the Multisubunit Na+/H+ antiporter	P	conserved hypothetical protein
9009	1.47293542531163	2.3964164311684	0.841370864616993	116	Predicted N6-adenine-specific DNA methylase	L	conserved hypothetical protein
9010	1.40420511907412	2.25836311483195	0.814826529694981	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0439
9011	1.46720587912867	2.41832808780322	0.864015862786864	1967	Predicted membrane protein	S	conserved hypothetical protein
9012	1.51761603385545	2.62462802842202	0.92910608221901	730	Predicted permeases	R	conserved hypothetical protein
9013	1.50089553092708	2.41123360270967	0.865923984324542	378	Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase	OK	hydrogenase expression/formation protein (hypB)
9014	1.41716425716184	2.31650709508146	0.832097218094046	1094	Predicted RNA-binding protein (contains KH domains)	R	conserved hypothetical protein
9015	1.44963799994834	2.29927126217912	0.801639795165688	1718	Serine/threonine protein kinase involved in cell cycle control	TD	conserved hypothetical protein
9016	1.40016446796693	2.20928727206327	0.912465146927738	361	Translation initiation factor 1 (IF-1)	J	translation initiation factor aIF-1A
9017	1.46905269497701	2.40660236510699	0.855184142066503	1060	Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes	HR	conserved hypothetical protein
9018	1.39505305578925	2.30840837632081	0.856188610856864	-	-	-	M. jannaschii predicted coding region MJ0447
9019	1.37909072565586	2.21136513069516	0.791655658281352	1237	Metal-dependent hydrolases of the beta-lactamase superfamily II	R	conserved hypothetical protein
9020	1.53210085287517	2.58776891180357	0.921011485099278	53	Predicted Co/Zn/Cd cation transporters	P	hypothetical transmembrane protein yeaB
9021	1.49760043675083	2.46778136824045	0.913900936864826	517	FOG: CBS domain	R	inosine monophosphate dehydrogenase isolog
9022	1.49507992714203	2.46301586616339	0.903096634635843	135	Phosphoribosylanthranilate isomerase	E	phosphoribosylanthranilate isomerase (trpF)
9023	1.53542654914939	2.49675707533415	0.941211738427096	4081	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9024	1.45649684199883	2.27382252959679	0.884010682131316	4033	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9025	1.4020137490001	2.28850710173273	0.831737170364835	182	Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	J	translation initiation factor aIF-2B, subunit delta (aIF2BD)
9026	1.41121373933278	2.30946225401523	0.836431082660677	4887	Uncharacterized metal-binding protein conserved in archaea	R	M. jannaschii predicted coding region MJ0455
9027	1.62142704105752	2.70399807172775	0.9285063419494	471	Di- and tricarboxylate transporters	P	conserved hypothetical protein
9028	1.41439517143777	2.29025064359442	0.829640428231419	624	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	E	succinyl-diaminopimelate desuccinylase (dapE)
9029	1.33663224175623	2.22214178538329	0.833958694264345	2054	Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases	R	delta 1-pyrroline-5-carboxylate synthetase
9030	1.46683545326069	2.29648706053448	0.95203586526603	2888	Predicted Zn-ribbon RNA-binding protein with a function in translation	J	M. jannaschii predicted coding region MJ0458.1
9031	1.25640112266568	2.11492496983259	0.916680419164089	2092	Translation elongation factor EF-1beta	J	M. jannaschii predicted coding region MJ0459
9032	1.45984246456374	2.35809360664016	0.860273117300069	91	Ribosomal protein L22	J	LSU ribosomal protein L22P (rplV)
9033	1.39058288668133	2.2487075578615	0.827856138570952	92	Ribosomal protein S3	J	SSU ribosomal protein S3P (rpsC)
9034	1.27228149043919	2.15913592960772	0.950137301893591	255	Ribosomal protein L29	J	LSU ribosomal protein L29P (rpmC)
9035	1.42448975485152	2.30243924820268	0.862408433936388	23	Translation initiation factor 1 (eIF-1/SUI1) and related proteins	J	conserved hypothetical protein
9036	1.95211718002878	3.0803783693588	0.972542092202018	1588	RNase P/RNase MRP subunit p29	J	conserved hypothetical protein
9037	1.33782853272963	2.10465150410301	0.839523773884687	186	Ribosomal protein S17	J	SSU ribosomal protein S17P (rpsQ)
9038	1.38359072242479	2.24464793224485	0.874637026274056	93	Ribosomal protein L14	J	LSU ribosomal protein L14P (rplN)
9039	1.35024803781307	2.106214559976	0.811532521116305	198	Ribosomal protein L24	J	LSU ribosomal protein L24P (rplX)
9040	1.38052661301555	2.17959106136888	0.752695166619584	1471	Ribosomal protein S4E	J	SSU ribosomal protein S4E
9041	1.37153256636271	2.16485932568153	0.791050090448925	94	Ribosomal protein L5	J	LSU ribosomal protein L5P (rplE)
9042	1.43624336310176	2.17560184895017	1.00549701509388	199	Ribosomal protein S14	J	SSU ribosomal protein S14P
9043	1.51535600285502	2.43793868688167	0.912835993162628	96	Ribosomal protein S8	J	SSU ribosomal protein S8P (rpsH)
9044	1.40498630468542	2.25387362949231	0.859162549764172	97	Ribosomal protein L6P/L9E	J	LSU ribosomal protein L6P (rplF)
9045	1.39684050183897	2.23782740754492	0.889167172636937	1717	Ribosomal protein L32E	J	LSU ribosomal protein L32E
9046	1.45693270359754	2.36160276932006	0.866616130281894	2147	Ribosomal protein L19E	J	LSU ribosomal protein L19E
9047	1.37463933483323	2.23753376347645	0.82517228799968	256	Ribosomal protein L18	J	LSU ribosomal protein L18P
9048	1.40575919657565	2.28104220044903	0.816609845657754	98	Ribosomal protein S5	J	SSU ribosomal protein S5P (rpsE)
9049	1.3803836153654	2.17630747894321	0.834602221355831	1841	Ribosomal protein L30/L7E	J	LSU ribosomal protein L30P (rpmD)
9050	1.39335257163368	2.20503195450351	0.840604841389594	200	Ribosomal protein L15	J	LSU ribosomal protein L15P (rplO)
9051	1.49283290103156	2.5514192450348	0.906142415575191	201	Preprotein translocase subunit SecY	U	protein translocase, subunit SEC61 alpha (secY)
9052	1.42499359492854	2.30618029108487	0.889904586532029	2019	Archaeal adenylate kinase	F	adenylate kinase (adk)
9053	1.55129390431923	2.58460563160281	0.916664041817842	1422	Predicted membrane protein	S	conserved hypothetical protein
9054	1.44508975304204	2.3300258425445	0.820434162918943	1432	Uncharacterized conserved protein	S	conserved hypothetical protein
9055	1.34094312795027	2.07091019872466	0.83630717202851	-	-	-	zinc finger protein
9056	1.43163767276144	2.26833307535949	0.807336591879942	1736	Diphthamide synthase subunit DPH2	J	conserved hypothetical protein
9057	1.45285717939623	2.36739276184582	0.849807215847139	1492	Cobyric acid synthase	H	cobyric acid synthase (cbiP)
9058	1.42254768608447	2.29286719618209	0.83197229103846	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein
9059	1.44527258349553	2.34452532450213	0.823446061072501	1242	Predicted Fe-S oxidoreductase	R	conserved hypothetical protein
9060	1.36891918979976	2.1723212571485	0.78691315550101	16	Phenylalanyl-tRNA synthetase alpha subunit	J	phenylalanyl-tRNA synthetase, subunit alpha (pheS)
9061	1.39262146173884	2.35827498173167	0.900080586841338	4019	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9062	1.41553486750065	2.29935742695507	0.832496115230137	4017	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9063	1.4324393949059	2.37649515874987	0.863733251575237	39	Malate/lactate dehydrogenases	C	L-lactate dehydrogenase EGAD|7256|705
9064	1.40097618594603	2.21155219801464	0.78915326452077	4077	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9065	1.4927000781415	2.52390198154053	0.912790938207749	-	-	-	M. jannaschii predicted coding region MJ0492
9066	1.47239418171014	2.41413095446147	0.883643000244297	157	Nicotinate-nucleotide pyrophosphorylase	H	nicotinate-nucleotide pyrophosphorylase (nadC)
9067	1.402159954457	2.22923015879299	0.883311612755921	1369	RNase P/RNase MRP subunit POP5	J	conserved hypothetical protein
9068	1.53144865656991	2.52179148959721	0.887949697112702	3276	Selenocysteine-specific translation elongation factor	J	putative translation factor, EF-1 alpha family
9069	1.56493794833348	2.5500649756125	0.945766908404857	-	-	-	M. jannaschii predicted coding region MJ0496
9070	1.3490308963953	2.22917752417099	0.84060839144843	1591	Holliday junction resolvase - archaeal type	L	M. jannaschii predicted coding region MJ0497
9071	1.34749010020594	2.1581690506597	0.830727845935701	4029	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9072	1.44499611271059	2.3878653643392	0.85407356079161	65	3-isopropylmalate dehydratase large subunit	E	3-isopropylmalate dehydratase (leuC)
9073	1.55188511070452	2.5761534832849	0.90741291612701	2014	Uncharacterized conserved protein	S	conserved hypothetical protein
9074	1.5489621547905	2.53294423506011	0.872086843920509	4073	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9075	1.40111938220462	2.34486003150372	0.838038655292514	128	5-enolpyruvylshikimate-3-phosphate synthase	E	3-phosphoshikimate-1-carboxyvinyltransferase (aroA)
9076	1.56956881068728	2.55593631549176	0.901668230916351	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA)
9077	1.36957441647599	2.25315546739075	0.834612170128112	1751	Uncharacterized conserved protein	S	conserved hypothetical protein
9078	1.38087504475446	2.19612504062431	0.737626042344604	3233	Predicted deacetylase	R	M. jannaschii predicted coding region MJ0505
9079	1.4238515918642	2.30640249700353	0.850583961318332	118	Glutamine amidotransferase	E	imidazole glycerol phosphate synthase, subunit H (hisH)
9080	1.43209474954968	2.35931126078349	0.856910109238239	2101	TATA-box binding protein (TBP), component of TFIID and TFIIIB	K	transcription initiation factor IID, TATA-box binding protein
9081	1.21619073755906	2.13154553566476	0.872520111223033	2058	Ribosomal protein L12E/L44/L45/RPP1/RPP2	J	LSU ribosomal protein L12A (P1)
9082	1.5003416463857	2.49833141138575	0.85958816332429	244	Ribosomal protein L10	J	LSU ribosomal protein L10E
9083	1.60721054044771	2.54992781626604	0.871060251594909	81	Ribosomal protein L1	J	LSU ribosomal protein L1P (rplA)
9084	1.64287664974244	2.66102420357561	0.860254425827452	207	Thymidylate synthase	F	thymidylate synthase (thyA)
9085	1.37465019693972	2.22022248083496	0.796445401532312	-	-	-	M. jannaschii predicted coding region MJ0512
9086	1.51420029154546	2.41088446186198	0.849435989658615	-	-	-	M. jannaschii predicted coding region MJ0513
9087	1.42231883028277	2.29672953895488	0.846882219409163	1145	Ferredoxin	C	polyferredoxin (mvhB)
9088	1.38222272344563	2.26642596718247	0.831712502230744	1145	Ferredoxin	C	polyferredoxin (mvhB)
9089	1.45344908803096	2.36226301972746	0.83505368466306	1145	Ferredoxin	C	polyferredoxin
9090	1.45825976326175	2.39635449042158	0.860229568664692	3261	Ni,Fe-hydrogenase III large subunit	C	carbon monoxide dehydrogenase, hydrogenase subunit CooH (cooH)
9091	1.38903513036184	2.2352728148656	0.886394381087295	3260	Ni,Fe-hydrogenase III small subunit	C	carbon monoxide dehydrogenase, hydrogenase subunit CooL (cooL)
9092	1.52646510503419	2.44809932494687	0.907670678787255	4084	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9093	1.67090105618779	2.74757811826948	1.00870103223802	4035	Predicted membrane protein	S	conserved hypothetical protein
9094	1.69980250592003	2.84378166633739	1.02806555331338	-	-	-	M. jannaschii predicted coding region MJ0519
9095	1.69213956730789	2.90128517515962	1.01221193743732	650	Formate hydrogenlyase subunit 4	C	NADH-ubiquinone oxidoreductase, subunit 1
9096	1.50136416516897	2.43456261376117	0.940738634112092	-	-	-	M. jannaschii predicted coding region MJ0521
9097	1.66241493268963	2.87416585991569	1.00876490680197	4078	Predicted membrane protein	S	NADH dehydrogenase I
9098	1.53878261903967	2.63038459190109	0.961971079477834	4036	Predicted membrane protein	S	conserved hypothetical protein
9099	1.72242663702563	2.82757203599829	0.951871327428516	4037	Predicted membrane protein	S	conserved hypothetical protein
9100	1.41031234576706	2.40728267295896	1.0275642300009	4038	Predicted membrane protein	S	conserved hypothetical protein
9101	1.58661021975355	2.68805798131462	1.05198173761044	4039	Predicted membrane protein	S	M. jannaschii predicted coding region MJ0526
9102	1.53239750492937	2.7286652451132	1.07008321107864	4040	Predicted membrane protein	S	conserved hypothetical protein
9103	1.61342910964774	2.73673440243199	0.988611405745077	4041	Predicted membrane protein	S	conserved hypothetical protein
9104	1.75905707131479	2.97976463497952	1.00691281893344	4042	Predicted membrane protein	S	conserved hypothetical protein
9105	1.52790270375056	2.52177011635197	0.891460299773356	-	-	-	repressor protein, putative
9106	1.5069449472716	2.46665154416285	0.888390764419148	1779	C4-type Zn-finger protein	R	conserved hypothetical
9107	1.41299996734671	2.35083288028464	0.893066750949184	589	Universal stress protein UspA and related nucleotide-binding proteins	T	conserved hypothetical protein
9108	1.36978295394828	2.25881910156291	0.816314443176376	644	Dehydrogenases (flavoproteins)	C	bacteriochlorophyll synthase 43 kDa subunit (chlP)
9109	1.43928155554049	2.29860331458192	0.991905367369179	1145	Ferredoxin	C	ferredoxin
9110	1.50150905574875	2.44374665929496	0.862377618745824	426	Uncharacterized flavoproteins	C	flavoprotein (fprA)
9111	1.34068382600384	2.19899569245319	0.795739326161772	123	Deacetylases, including yeast histone deacetylase and acetoin utilization protein	BQ	acetylpolyamine aminohydrolase (aphA)
9112	1.42788390823544	2.37819935340335	0.844468671787417	1014	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit	C	2-ketoglutarate ferredoxin oxidoreductase, subunit gamma (korG)
9113	1.47398068487222	2.43122740525333	0.892766331944878	1013	Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit	C	2-ketoglutarate ferredoxin oxidoreductase, subunit beta (korB)
9114	1.42215594443416	2.29230983007811	0.815445553149553	-	-	-	M. jannaschii predicted coding region MJ0538
9115	1.42397577730578	2.29261237308923	0.820878188549768	1384	Lysyl-tRNA synthetase (class I)	J	tRNA synthetase, putative
9116	1.37583197287764	2.13032018271749	0.86634171109298	4013	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0540
9117	1.49829436448609	2.42785356927291	0.883362825731149	1056	Nicotinamide mononucleotide adenylyltransferase	H	conserved hypothetical protein
9118	1.42926056448022	2.33280043908757	0.834392989116363	1372	Intein/homing endonuclease	L	phosphoenolpyruvate synthase
9119	1.33829623557363	2.13841536371605	0.798892830629432	197	Ribosomal protein L16/L10E	J	ubiquinol-cytochrome C reductase complex, subunitVI requiring protein
9120	1.48931007856099	2.41370517668272	0.855818044908519	463	Glycosyltransferases involved in cell wall biogenesis	M	dolichyl-phosphate mannose synthase
9121	1.52236298294822	2.54579959214621	0.846184788628713	-	-	-	M. jannaschii predicted coding region MJ0545
9122	1.77507183253606	2.99234603063999	1.06010386449547	-	-	-	M. jannaschii predicted coding region MJ0546
9123	1.51343743914587	2.60672657259416	0.942236916563628	455	ATPases involved in chromosome partitioning	D	cell division inhibitor minD
9124	1.46968451478176	2.36172447638768	0.857225971555386	4079	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9125	1.39210604405409	2.34675036984368	0.89984262306082	864	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-bin	K	conserved hypothetical protein
9126	1.41866983354321	2.32234888038819	0.797757916725957	1244	Predicted Fe-S oxidoreductase	R	conserved hypothetical protein
9127	1.47189554621227	2.37067253823403	0.846986355808169	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	nitrite reductase (nirA) isolog
9128	1.4411885636254	2.3278175307531	0.827689252034419	2099	Precorrin-6x reductase	H	cobalamin biosynthesis protein (cbiJ)
9129	1.64171811043156	2.6806361469578	0.920341333190034	1254	Acylphosphatases	C	M. jannaschii predicted coding region MJ0553
9130	1.67039953649322	2.82165542039461	0.985138393064405	-	-	-	conserved hypothetical protein
9131	1.44862567672139	2.35539704646639	0.852901409768151	1363	Cellulase M and related proteins	G	endoglucanase (celM)
9132	1.67740060277033	2.70762161780943	0.888126929951346	517	FOG: CBS domain	R	M. jannaschii predicted coding region MJ0556
9133	1.41235948264407	2.28603688187221	0.834562802657316	1756	Uncharacterized conserved protein	S	conserved hypothetical protein
9134	1.44079109379783	2.3356906381267	0.835280618356279	1497	Predicted transcriptional regulator	K	conserved hypothetical protein
9135	1.47072854293653	2.47023596271232	0.888318321560295	496	Predicted acid phosphatase	R	surE stationary-phase survival protein SurE
9136	1.4831362905537	2.38479212702807	0.840533813447989	-	-	-	M. jannaschii predicted coding region MJ0560
9137	1.45951937796194	2.38628029531754	0.876782747728287	104	Adenylosuccinate synthase	F	adenylosuccinate synthetase (purA)
9138	1.46515619229327	2.34624358212565	0.86986457565919	-	-	-	M. jannaschii predicted coding region MJ0562
9139	1.40653134909689	2.19573761541324	0.802893936077211	270	Site-specific DNA methylase	L	modification methylase, type II R/M system
9140	1.43337593880826	2.28602991932849	0.811814428386244	13	Alanyl-tRNA synthetase	J	alanyl-tRNA synthetase (alaS)
9141	1.47035106286228	2.51977624359717	0.94836333330119	-	-	-	M. jannaschii predicted coding region MJ0565
9142	1.4983263124314	2.51585060217946	0.893034163955415	370	Fe2+ transport system protein B	P	ferrous iron transport protein B (feoB)
9143	1.44903903033773	2.45987769233593	0.958138040323123	1918	Fe2+ transport system protein A	P	conserved hypothetical protein
9144	1.29091663785313	2.12830380878691	0.831250350605103	1321	Mn-dependent transcriptional regulator	K	iron dependent repressor
9145	1.37964055110952	2.26181695031583	0.836723344869675	181	Porphobilinogen deaminase	H	porphobilinogen deaminase (hemC)
9146	1.44038791117764	2.34596308291355	0.875106763034312	2102	Predicted ATPases of PP-loop superfamily	R	conserved hypothetical protein
9147	1.42517078296989	2.4322681444687	0.877754582697395	527	Aspartokinases	E	aspartate kinase (lysC)
9148	1.36638189377901	2.1178189325604	0.847676877189733	457	FOG: TPR repeat	R	M. jannaschii predicted coding region MJ0572
9149	1.46155154716215	2.42344815631495	0.914673591703128	1765	Predicted redox protein, regulator of disulfide bond formation	O	M. jannaschii predicted coding region MJ0573
9150	1.46781177674098	2.43362448031709	0.956342467872202	-	-	-	M. jannaschii predicted coding region MJ0574
9151	1.47760757075722	2.37403396140569	0.847352539091256	1810	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9152	1.65120212462686	2.74255996247015	0.953691354601829	1275	Tellurite resistance protein and related permeases	P	malic acid transport protein
9153	1.47787606452689	2.43647919576708	0.877504312242882	589	Universal stress protein UspA and related nucleotide-binding proteins	T	conserved hypothetical protein
9154	1.48280535106076	2.43437339403126	0.860465615619378	1149	MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	C	iron-sulfer cluster binding protein
9155	1.45292557930696	2.36926046284883	0.864583918800943	1149	MinD superfamily P-loop ATPase containing an inserted ferredoxin domain	C	cell division inhibitor minD-like
9156	1.59422031217548	2.66397655481601	0.953151816680486	1433	Uncharacterized conserved protein	S	conserved hypothetical protein
9157	1.7076065849748	2.74889550910756	0.984852223038029	526	Thiol-disulfide isomerase and thioredoxins	OC	conserved hypothetical protein
9158	1.47622988875969	2.3868351105146	0.933221137864124	5561	Predicted metal-binding protein	S	conserved hypothetical protein
9159	1.58114926295149	2.42805136564564	1.01025628517463	-	-	-	M. jannaschii predicted coding region MJ0583
9160	1.83597162240204	3.18423502255771	1.05804323904397	701	Predicted permeases	R	conserved hypothetical protein
9161	1.48041073318588	2.47573065602559	0.901610150467237	-	-	-	M. jannaschii predicted coding region MJ0585
9162	1.32148774620335	2.16485822040253	0.828532623314782	1813	Predicted transcription factor, homolog of eukaryotic MBF1	K	conserved hypothetical protein
9163	1.62657769710624	2.74548498148966	0.972475766728822	-	-	-	M. jannaschii predicted coding region MJ0587
9164	1.46698208837859	2.32312296527289	0.833301131643498	585	Uncharacterized conserved protein	S	conserved hypothetical protein
9165	1.4803907189426	2.31843928321866	0.906733601220295	-	-	-	M. jannaschii predicted coding region MJ0589
9166	1.33404791970857	2.07985338078032	0.941567909342514	4049	Uncharacterized protein containing archaeal-type C2H2 Zn-finger	R	Uncharacterized protein
9167	1.4277081311399	2.3603020425203	0.836404636045897	1042	Acyl-CoA synthetase (NDP forming)	C	conserved hypothetical protein
9168	1.46905120963818	2.42968237668261	0.846197344481262	638	20S proteasome, alpha and beta subunits	O	proteasome, subunit alpha (psmA)
9169	1.47181647894077	2.43931927012065	0.874936579878751	1500	Predicted exosome subunit	J	conserved hypothetical protein
9170	1.24305011545667	2.00232962649033	0.86884992356431	1997	Ribosomal protein L37AE/L43A	J	LSU ribosomal protein L37AE
9171	1.73035771213485	2.67937399890673	1.04855191687532	1996	DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)	K	DNA-directed RNA polymerase subunit
9172	1.42915604374393	2.31838531544161	0.866957414257091	2136	Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 dom	JA	M. jannaschii predicted coding region MJ0594
9173	1.4094892571159	2.52877433037955	0.971181263210485	2892	Uncharacterized protein conserved in archaea	S	Uncharacterized conserved protein
9174	1.41229855583182	2.27519545595662	0.931989727432314	2157	Ribosomal protein L20A (L18A)	J	LSU ribosomal protein LXA
9175	1.27054832234097	2.11781052235341	0.852297953082935	-	-	-	M. jannaschii predicted coding region MJ0596
9176	1.42809227574872	2.3552572774183	0.869083381608194	502	Biotin synthase and related enzymes	H	conserved hypothetical protein
9177	1.36852552103064	2.12043613132966	0.745975212046179	338	Site-specific DNA methylase	L	modification methylase, type II R/M system 2
9178	1.46085740205198	2.22189035978851	0.758000824722781	-	-	-	M. jannaschii predicted coding region MJ0599
9179	1.2807428372179	2.03561524902241	0.733084134620918	-	-	-	restriction enzyme, type II R/M system 2
9180	1.41118322332383	2.33404075140534	0.873173129986036	1635	Flavoprotein involved in thiazole biosynthesis	H	thiamine biosynthetic enzyme (thi1)
9181	1.40245864300558	2.33454352453341	0.856206351370343	-	-	-	M. jannaschii predicted coding region MJ0602
9182	1.39308145318604	2.26254515363398	0.792313522328763	1	Glutamate-1-semialdehyde aminotransferase	H	glutamate-1-semialdehyde aminotransferase (hemL)
9183	1.39212615962634	2.24698311739473	0.892042701610986	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein
9184	1.48797712339335	2.47312365984338	0.892273046789094	1895	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	M. jannaschii predicted coding region MJ0605
9185	1.4964469753932	2.51796780120992	0.970498407082375	-	-	-	conserved hypothetical protein
9186	1.4446002152016	2.30627634126487	0.909898572932027	-	-	-	M. jannaschii predicted coding region MJ0607
9187	1.39985569189933	2.31021462363403	0.830772770137534	1227	Inorganic pyrophosphatase/exopolyphosphatase	C	exopolyphosphatase (ppx1)
9188	1.64447518256614	2.85197336727657	1.00162432517743	531	Amino acid transporters	E	amino acid transporter
9189	1.52351112893872	2.49088117685237	0.881288891313502	76	Glutamate decarboxylase and related PLP-dependent proteins	E	conserved hypothetical protein
9190	1.65363933216766	2.76882617062943	0.988965781032856	705	Uncharacterized membrane protein (homolog of Drosophila rhomboid)	R	glpG-related protein
9191	1.58438225318653	2.6396714183444	0.960293216342536	1994	Zn-dependent proteases	R	conserved hypothetical integral membrane protein
9192	1.46655918596531	2.50949996528205	0.923362816990173	671	Membrane-associated phospholipid phosphatase	I	M. jannaschii predicted coding region MJ0611.1
9193	1.44329661649807	2.3488577707756	0.84441307100331	4937	Predicted regulatory domain of prephenate dehydrogenase	J	chorismate mutase/prephenate dehydratase (tyrA)
9194	1.37585480318424	2.1782010523954	0.777965920167529	1833	Uncharacterized conserved protein	S	endonuclease III (nth1)
9195	1.42859313580639	2.28898857619701	0.902492784327483	1417	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0614
9196	1.39851773884358	2.31069343371335	0.850273982780774	1394	Archaeal/vacuolar-type H+-ATPase subunit D	C	H+-transporting ATP synthase, subunit D (atpD)
9197	1.37048523574412	2.31692763546723	0.885500372329411	41	Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase	F	phosphoribosylaminoimidazole carboxylase, (purE)
9198	1.4549974263605	2.37469019508886	0.878332989068147	1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	C	tartrate dehydratse, subunit beta (ttdB)
9199	1.27975063830624	2.10768024981465	0.909059780920338	1872	Uncharacterized conserved protein	S	conserved hypothetical protein
9200	1.44192564178936	2.32663016846559	0.823567802527388	1964	Predicted Fe-S oxidoreductases	R	conserved hypothetical protein
9201	1.39184586942189	2.25553122203819	0.758292067020335	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein 1 (rimK)
9202	1.52945274416414	2.60777367975091	0.922374994062606	4800	Predicted transcriptional regulator with an HTH domain	K	conserved hypothetical protein
9203	1.43375106779299	2.37571793929597	0.841909479520146	206	Cell division GTPase	D	cell division protein ftsZ
9204	1.58924792766293	2.54345688478734	0.878227351380293	622	Predicted phosphoesterase	R	conserved hypothetical protein
9205	1.43193262401459	2.32294304991813	0.965928754466085	1145	Ferredoxin	C	ferredoxin
9206	1.41474365889189	2.28822492854618	0.803518527702669	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0625
9207	1.42033460615563	2.25612421747973	0.842369177744021	3363	Archaeal IMP cyclohydrolase	F	conserved hypothetical protein
9208	1.39517756023671	2.26883077109724	0.817217445658854	-	-	-	M. jannaschii predicted coding region MJ0627
9209	1.3694623485556	2.21582610517493	0.706836956154087	-	-	-	M. jannaschii predicted coding region MJ0628
9210	1.3558294428592	2.19421298529522	0.788954240415533	1392	Phosphate transport regulator (distant homolog of PhoU)	P	conserved hypothetical protein
9211	1.45719844188417	2.62711571103773	0.950457154512878	306	Phosphate/sulphate permeases	P	putative phosphate permease
9212	1.38945518432989	2.27456029781942	0.847854857733709	680	Ni,Fe-hydrogenase maturation factor	C	hydrogenase maturation protease (hycI)
9213	1.43666889468028	2.29998143135631	0.825944257723268	1672	Predicted ATPase (AAA+ superfamily)	R	replication initiator protein, putative (dnaA)
9214	1.38058015440583	2.1982021092792	0.783458422479235	495	Leucyl-tRNA synthetase	J	leucyl-tRNA synthetase (leuS)
9215	1.43099958567417	2.31409715211561	0.832241566897934	1509	Lysine 2,3-aminomutase	E	conserved hypothetical protein
9216	1.43092623464306	2.31381430150894	0.836002898472204	-	-	-	M. jannaschii predicted coding region MJ0635
9217	1.47015321404349	2.38092040679857	0.869047986340571	1249	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and re	C	dihydrolipoamide dehydrogenase
9218	1.31750547904901	2.13824380069608	0.758405130943353	77	Prephenate dehydratase	E	chorismate mutase/prephenate dehydratase (pheA)
9219	1.40988441477165	2.23323658656804	0.803013240019109	500	SAM-dependent methyltransferases	QR	M. jannaschii predicted coding region MJ0638
9220	1.39431644032131	2.25907438088261	0.883253700083841	-	-	-	M. jannaschii predicted coding region MJ0639
9221	1.34765338887343	2.18081045651466	0.772720058082453	2144	Selenophosphate synthetase-related proteins	R	conserved hypothetical protein
9222	1.45706059127406	2.40015917216736	0.877819063068098	126	3-phosphoglycerate kinase	G	phosphoglycerate kinase (pgk)
9223	1.49627976088295	2.37566503557126	0.817080828844412	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	M. jannaschii predicted coding region MJ0642
9224	1.46355186087813	2.42761623920707	0.874242377853329	113	Delta-aminolevulinic acid dehydratase	H	porphobilinogen synthase (hemB)
9225	1.51922610881544	2.45879399087713	0.891709538908903	684	Demethylmenaquinone methyltransferase	H	S-adenosylmethionine:2-demethylmenaquinone methyltransferase (menG)
9226	1.71031524902678	3.03916648953919	1.0213268799846	1814	Uncharacterized membrane protein	S	conserved hypothetical protein
9227	1.40199554144546	2.21363775687446	0.814789008396249	4066	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9228	1.86857656251507	3.01336848256039	1.03013742297233	-	-	-	M. jannaschii predicted coding region MJ0647
9229	1.33113412397448	2.28257178089474	0.881660910224449	1730	Predicted prefoldin, molecular chaperone implicated in de novo protein folding	O	M. jannaschii predicted coding region MJ0648
9230	1.35388677863131	2.22575198725038	0.799006147613345	446	Uncharacterized NAD(FAD)-dependent dehydrogenases	R	NADH oxidase (nox)
9231	1.51688070189499	2.48410437643207	0.872664132525746	-	-	-	M. jannaschii predicted coding region MJ0650
9232	1.40017939734367	2.2983690539042	0.8497750400131	616	Periplasmic serine proteases (ClpP class)	OU	protease IV (sppA)
9233	1.3396134107575	2.11601835552845	0.852178588828161	1534	Predicted RNA-binding protein containing KH domain, possibly ribosomal protein	J	conserved hypothetical protein
9234	1.36068200037039	2.28241340641852	0.879299041113405	517	FOG: CBS domain	R	inosine-5'-monophosphate dehydrogenase (guaB)
9235	1.30399663272289	2.16296302075301	0.777127352442653	167	Dihydroorotate dehydrogenase	F	dihydroorotase dehydrogenase (pyrD)
9236	1.44138083821655	2.22315715277516	0.889121063393486	2174	Ribosomal protein L34E	J	LSU ribosomal protein L34E
9237	1.4834766622728	2.44133044781502	0.87715170436966	1102	Cytidylate kinase	F	cytidylate kinase (cmk)
9238	1.25048347405412	2.01000391913464	0.842748215570799	2163	Ribosomal protein L14E/L6E/L27E	J	LSU ribosomal protein L14E
9239	1.43650600354937	2.28557108611598	0.807003305318238	2218	Formylmethanofuran dehydrogenase subunit C	C	M. jannaschii predicted coding region MJ0658
9240	1.28336432516713	2.18419188309313	0.835403105906233	-	-	-	M. jannaschii predicted coding region MJ0659
9241	1.42776575859781	2.24515337095619	0.889392803567087	3269	Predicted RNA-binding protein, contains TRAM domain	R	conserved hypothetical protein
9242	1.46438853922527	2.24752764813034	0.812630217874353	727	Predicted Fe-S-cluster oxidoreductase	R	conserved hypothetical protein
9243	1.47833681748941	2.43019107304875	0.868779256293952	671	Membrane-associated phospholipid phosphatase	I	M. jannaschii predicted coding region MJ0662
9244	1.51426575142602	2.49613742619638	0.877341664412479	28	Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome)	EH	acetolactate synthase large subunit (ilvB)
9245	1.38638899218081	2.20750001753029	0.779490991764286	551	Zn-finger domain associated with topoisomerase type I	L	M. jannaschii predicted coding region MJ0664
9246	1.5097158391683	2.42523989138308	0.857344312496162	1817	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9247	1.4513977717632	2.37185020785048	0.815630409989964	303	Molybdopterin biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moeA)
9248	1.42335011736703	2.40096112371643	0.872888970973072	213	Thymidine phosphorylase	F	thymidine phosphorylase (deoA)
9249	1.27578219465557	2.14555543784414	0.820790508410108	-	-	-	M. jannaschii predicted coding region MJ0668
9250	1.37970883085939	2.25238035406277	0.81056809169641	513	Superfamily II DNA and RNA helicases	LKJ	ATP-dependent RNA helicase, DEAD-family (deaD)
9251	1.32344589369969	2.14308385380873	0.763562268704795	4121	Uncharacterized conserved protein	S	conserved hypothetical protein
9252	1.47926220630606	2.36380640508324	0.883259048942419	1985	Pyrimidine reductase, riboflavin biosynthesis	H	riboflavin-specific deaminase (ribG)
9253	1.53359782013221	2.64634889562557	0.938044156311357	471	Di- and tricarboxylate transporters	P	membrane bound transport protein, putative
9254	1.3371537498249	2.16273612681959	0.825476657197863	2007	Ribosomal protein S8E	J	SSU ribosomal protein S8E
9255	1.4577801000663	2.27597567934242	0.804392023812246	1313	Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins	R	pyruvate formate lyase-activating enzyme isolog (pflX)
9256	1.42484293470676	2.31713691741271	0.825319536432876	1568	Predicted methyltransferases	R	conserved hypothetical protein
9257	1.43644679247174	2.4151235679341	0.862355404572065	309	Hydrogenase maturation factor	O	hydrogenase expression/formation protein (hypE)
9258	1.38472130503791	2.28979377576086	0.844327020740201	214	Pyridoxine biosynthesis enzyme	H	ethylene-inducible protein
9259	1.45032935462419	2.54464389253613	0.886299065032015	1808	Predicted membrane protein	S	conserved hypothetical protein
9260	1.41136917322275	2.37363080498428	0.872988699824797	3958	Transketolase, C-terminal subunit	G	transketolase''
9261	1.39489125931476	2.28901237211007	0.830012131866311	36	Pentose-5-phosphate-3-epimerase	G	pentose-5-phosphate-3-epimerase
9262	1.36848408099479	2.25109198226277	0.829462257614659	3959	Transketolase, N-terminal subunit	G	transketolase'
9263	1.47648137122506	2.41995497829333	0.86800686980962	1372	Intein/homing endonuclease	L	conserved hypothetical protein
9264	1.52421673865207	2.48528007098256	0.845997951558527	1533	DNA repair photolyase	L	conserved hypothetical protein
9265	1.41721162742685	2.35088082106168	0.838652894556559	436	Aspartate/tyrosine/aromatic aminotransferase	E	aspartate aminotransferase (aspB2)
9266	1.45794327915682	2.37134676989954	0.866071235855139	3640	CO dehydrogenase maturation factor	D	nitrogenase reductase (nifH2)
9267	1.41846832778448	2.30921642501357	0.783215715867508	3472	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0686
9268	1.44612110779815	2.35239643495039	0.83513775400489	2834	Outer membrane lipoprotein-sorting protein	M	conserved hypothetical protein
9269	1.27755012239216	2.04302744845446	0.77675851127228	1255	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9270	1.52941518627959	2.31899051839102	1.0392393332867	2167	Ribosomal protein L39E	J	LSU ribosomal protein L39E
9271	1.53129064543284	2.54628557965111	0.905164288218388	2117	Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-lo	J	conserved hypothetical protein
9272	1.4446791725903	2.37071871893526	0.943755201899782	2118	DNA-binding protein	R	conserved hypothetical protein
9273	1.41971757422828	2.2679426973625	0.874108916032301	2238	Ribosomal protein S19E (S16A)	J	SSU ribosomal protein S19E
9274	1.39617700005846	2.21006676970266	0.811338465008648	4015	Predicted dinucleotide-utilizing enzyme of the ThiF/HesA family	R	conserved hypothetical protein
9275	1.40275418337899	2.26503062776969	0.821924102974844	1498	Protein implicated in ribosomal biogenesis, Nop56p homolog	J	conserved hypothetical protein
9276	1.32201216743466	2.09940605213689	0.802702789144164	-	-	-	M. jannaschii predicted coding region MJ0695
9277	1.40750478400966	2.35024879316546	0.83380720619393	-	-	-	M. jannaschii predicted coding region MJ0696
9278	1.35566025876301	2.22018562533848	0.825639716964011	1889	Fibrillarin-like rRNA methylase	J	fibrillarin (fib)
9279	1.47022277099325	2.37567027231094	0.855405021297885	131	Imidazoleglycerol-phosphate dehydratase	E	imidazoleglycerol-phosphate dehydrogenase/histidinol-phosphatase (hisB)
9280	1.5731012838073	2.52819167556497	0.90785289807452	402	Cytosine deaminase and related metal-dependent hydrolases	FR	atrazine chlorohydrolase isolog
9281	1.53249151044668	2.56569837025163	0.896700403873163	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein
9282	1.46827977399871	2.36049047215345	0.840455037274507	2219	Eukaryotic-type DNA primase, large subunit	L	M. jannaschii predicted coding region MJ0701
9283	1.43840473990775	2.30512529070991	0.81746095625453	1311	Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B	L	DNA polymerase delta small subunit
9284	1.42617701450792	2.32402817604816	0.867558460431682	1411	Uncharacterized protein related to proFAR isomerase (HisA)	R	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA2)
9285	1.50784098607463	2.69903321785659	0.958226739194666	-	-	-	M. jannaschii predicted coding region MJ0703.1
9286	1.46548508170933	2.4141718225665	0.845340064186701	-	-	-	M. jannaschii predicted coding region MJ0704
9287	1.42774755460324	2.38409845113431	0.852173037573009	1257	Hydroxymethylglutaryl-CoA reductase	I	3-hydroxy-3-methylglutaryl coenzyme A reductase
9288	1.57076166014205	2.64002223915497	0.960073663265299	1300	Uncharacterized membrane protein	S	conserved hypothetical protein
9289	1.219334406189	1.85200750692125	0.98054254147913	1552	Ribosomal protein L40E	J	LSU ribosomal protein L40E (CEP52)
9290	1.53533671011563	2.51531626536238	0.87066099381203	2042	Uncharacterized conserved protein	S	conserved hypothetical protein
9291	1.45396755426333	2.56253376194623	0.925242503797672	534	Na+-driven multidrug efflux pump	V	conserved hypothetical protein
9292	1.52610719525182	2.4384761015572	0.85270222353551	1041	Predicted DNA modification methylase	L	conserved hypothetical protein
9293	1.45625472667942	2.41007413791188	0.894016693839317	-	-	-	M. jannaschii predicted coding region MJ0711
9294	1.40401010230282	2.40805530838619	0.84656055194727	371	Glycerol dehydrogenase and related enzymes	C	glycerol dehydrogenase (gldA)
9295	1.46396048531014	2.34384603439447	0.836274649061539	68	Hydrogenase maturation factor	O	hydrogenase expression regulatory protein (hypF)
9296	1.51057108193655	2.59139283918898	0.999240342681764	2018	Uncharacterized distant relative of homeotic protein bithoraxoid	R	conserved hypothetical protein
9297	1.38562314454408	2.33203754030488	0.835544243426927	4007	Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase	R	H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase-related protein (hmd)
9298	1.44174274438555	2.28558806565282	0.889654972484372	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	Uncharacterized conserved protein
9299	1.3138005298111	2.08004993083264	0.859441656920829	314	Molybdopterin converting factor, large subunit	H	molybdopterin converting factor, subunit 2 (moaE)
9300	1.55941480056899	2.61380926045087	0.884595947746165	2059	Chromate transport protein ChrA	P	chromate resistance protein (chrA)
9301	1.42222454806031	2.29690251349183	0.821653376997602	1245	Predicted ATPase, RNase L inhibitor (RLI) homolog	R	RNase L inhibitor
9302	1.32987393359425	2.1725185632301	0.788449941159563	473	Isocitrate/isopropylmalate dehydrogenase	CE	3-isopropylmalate dehydrogenase 1 (leuB1)
9303	1.50587820053902	2.44433982029622	0.875483413940478	4992	Ornithine/acetylornithine aminotransferase	E	acetylornithine aminotransferase (argD)
9304	1.49036584741729	2.2729270376549	0.934660297618896	1146	Ferredoxin	C	ferredoxin (fdxA)
9305	1.48430558119841	2.44226715906797	0.906083349277417	1522	Transcriptional regulators	K	transcriptional regulatory protein, AsnC family
9306	1.41863912225679	2.2759095137575	0.848127376515128	1059	Thermostable 8-oxoguanine DNA glycosylase	L	conserved hypothetical protein
9307	1.47144496851705	2.41809711512599	0.855561862005478	1035	Coenzyme F420-reducing hydrogenase, beta subunit	C	coenzyme F420-reducing hydrogenase, beta subunit
9308	1.45012529715817	2.33497444894509	0.852058470702984	1941	Coenzyme F420-reducing hydrogenase, gamma subunit	C	coenzyme F420-reducing hydrogenase, gamma subunit
9309	1.39539696894592	2.27400692789132	0.812511262367608	3259	Coenzyme F420-reducing hydrogenase, alpha subunit	C	coenzyme F420-reducing hydrogenase, alpha subunit
9310	1.49981088907813	2.48760569458219	0.829324341725017	1151	6Fe-6S prismane cluster-containing protein	C	carbon monoxide dehydrogenase, catalytic subunit (cooS)
9311	1.38679756253755	2.2117880086948	0.835509112315201	517	FOG: CBS domain	R	conserved hypothetical protein
9312	1.48156351209262	2.35663717087545	0.855723401492979	1036	Archaeal flavoproteins	C	DNA/pantothenate metabolism flavoprotein-like
9313	1.50805377559754	2.41182932406419	0.860655516391382	655	Multimeric flavodoxin WrbA	R	iron-sulfur flavoprotein (isf)
9314	1.60614140020898	2.59232976567998	0.8919013724763	426	Uncharacterized flavoproteins	C	flavoprotein (fprA)
9315	1.38879023078402	2.2109539363815	0.786175050117791	-	-	-	M. jannaschii predicted coding region MJ0733
9316	1.41294232021234	2.26434782944545	0.831671271136006	1592	Rubrerythrin	C	rubrerythrin (rr)
9317	1.52136013673002	2.34528131239566	0.95586876163945	1773	Rubredoxin	C	rubredoxin 1 (rd1)
9318	1.4977701951114	2.39581871592558	0.864049176611301	450	Peroxiredoxin	O	alkyl hydroperoxide reductase
9319	1.67074803973323	2.6006890159581	0.971934721338428	1773	Rubredoxin	C	rubredoxin-like non-heme iron protein
9320	1.42586522430566	2.26442597833325	0.905099609057013	4746	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9321	1.52513018264069	2.46982756234698	0.890643883823382	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	M. jannaschii predicted coding region MJ0739
9322	1.59036828189733	2.4473942327705	0.975797325731352	1773	Rubredoxin	C	rubredoxin 2 (rd2)
9323	1.56210664478338	2.43587113250978	0.885684377437012	2033	Desulfoferrodoxin	C	desulfoferrodoxin, putative (rbo)
9324	1.52921941900568	2.50301914791054	0.943643862728561	599	Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit	S	conserved hypothetical protein
9325	1.60645500212402	2.57587423252644	0.893761785366803	2048	Heterodisulfide reductase, subunit B	C	heterodisulfide reductase, subunit B1 (hdrB1)
9326	1.46247570389042	2.41086737772304	0.831884832151632	1150	Heterodisulfide reductase, subunit C	C	heterodisulfide reductase, subunit C (hdrC)
9327	1.47122364009523	2.34250019865622	0.808329603081153	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	M. jannaschii predicted coding region MJ0745
9328	1.32587674141265	2.18828192792852	0.843341519291979	1592	Rubrerythrin	C	conserved hypothetical protein
9329	1.47602514897082	2.37113097809981	0.858328175961814	2703	Hemerythrin	P	hemerythrin sipunculid
9330	1.56750298883939	2.51914100767447	0.875260138505208	426	Uncharacterized flavoproteins	C	flavoprotein (fpaA)
9331	1.50287421925348	2.43838955026154	0.865297263058239	348	Polyferredoxin	C	conserved hypothetical protein
9332	1.50760700214667	2.45593557871213	0.890059284197481	348	Polyferredoxin	C	ferredoxin-type protein (napH)
9333	1.72647443378001	2.76635318428728	0.889559448692985	675	Transposase and inactivated derivatives	L	conserved hypothetical protein
9334	1.32595453918759	2.16278608066929	0.946297711278476	675	Transposase and inactivated derivatives	L	M. jannaschii predicted coding region MJ0752
9335	1.55633452601612	2.58310963743431	0.895895589505387	-	-	-	M. jannaschii predicted coding region MJ0753
9336	1.4037212776714	2.30624131042476	0.851542849449449	4902	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0754
9337	1.45880748224399	2.40599175441382	0.874959319580053	2247	Putative cell wall-binding domain	M	N-acetylmuramoyl-L-alanine amidase
9338	1.48871880557333	2.36864426921908	0.897683996137931	-	-	-	M. jannaschii predicted coding region MJ0756
9339	1.5730198613516	2.47587401684788	0.889228079910309	1810	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9340	1.59319834828466	2.59306188258607	0.962090706934739	-	-	-	M. jannaschii predicted coding region MJ0758
9341	1.39509327997781	2.45094844233976	0.88324072542627	-	-	-	conserved hypothetical protein
9342	1.4186744033292	2.31432067163671	0.840673019409264	2044	Predicted peroxiredoxins	R	conserved hypothetical protein
9343	1.48303716237351	2.40394846057519	0.862142106218628	1099	Predicted metal-dependent hydrolases with the TIM-barrel fold	R	conserved hypothetical protein
9344	1.81603068092725	3.01842741128753	0.998054878788755	1275	Tellurite resistance protein and related permeases	P	C4-dicarboxylate transporter (mae1)
9345	1.50155326527661	2.4028728240791	0.890155478918632	-	-	-	M. jannaschii predicted coding region MJ0763
9346	1.47800650216977	2.33865579540242	0.9000331465406	1917	Uncharacterized conserved protein, contains double-stranded beta-helix domain	S	M. jannaschii predicted coding region MJ0764
9347	1.52977093320302	2.44779323917286	0.866170274387169	1151	6Fe-6S prismane cluster-containing protein	C	[6Fe-6S] prismane-containing protein
9348	1.43561865390288	2.37886639096398	1.00077929318534	5561	Predicted metal-binding protein	S	M. jannaschii predicted coding region MJ0766
9349	1.3910383902425	2.30501477189906	0.88578109488848	864	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-bin	K	conserved hypothetical protein
9350	1.44049914591456	2.38241866152789	0.883236896742949	1478	Uncharacterized conserved protein	S	conserved hypothetical protein
9351	1.49066361701998	2.38709999632308	0.820453421675707	-	-	-	M. jannaschii predicted coding region MJ0769
9352	1.6312686777887	2.61740519344566	0.90660847131986	582	Integrase	L	M. jannaschii predicted coding region MJ0770
9353	1.61868955377439	2.61276422855909	0.924881849397185	2243	Precorrin-2 methylase	H	cobalamin biosynthesis precorrin-2 methyltransferase (cbiL)
9354	1.48865026833671	2.38038513658904	0.834880215590602	-	-	-	M. jannaschii predicted coding region MJ0772
9355	1.76802420690077	2.94041474424682	0.947443307880512	-	-	-	M. jannaschii predicted coding region MJ0773
9356	1.49625364837768	2.53822478310088	0.916699097216156	640	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ0774
9357	1.4156326122705	2.33984915468254	0.812262603660523	1469	Uncharacterized conserved protein	S	conserved hypothetical protein
9358	1.41066736281722	2.31192052455544	0.823813381092181	2232	Predicted ATP-dependent carboligase related to biotin carboxylase	R	conserved hypothetical protein
9359	1.57118376391145	2.44834406390588	0.863938556133526	1675	Transcription initiation factor IIE, alpha subunit	K	putative transcription initiation factor (TFIIE, subunit alpha)
9360	1.50967960634843	2.47624997073109	0.931089687949896	1418	Predicted HD superfamily hydrolase	R	conserved hypothetical protein
9361	1.52998857798692	2.62169198362299	0.935965863798511	2064	Flp pilus assembly protein TadC	NU	conserved hypothetical protein
9362	1.58450485924331	2.62519817505581	0.890401432368678	2064	Flp pilus assembly protein TadC	NU	M. jannaschii predicted coding region MJ0780
9363	1.48836365822107	2.42989646478009	0.859775955531815	1372	Intein/homing endonuclease	L	type II secretion system protein
9364	1.46904783444069	2.41408825575898	0.852884641114691	1405	Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB	K	transcription initiation factor IIB (TFIIB)
9365	1.63457349094445	2.6399586376141	0.966850237586233	3277	RNA-binding protein involved in rRNA processing	J	conserved hypothetical protein
9366	1.53041074939376	2.48479678836825	0.903315611775343	1878	Predicted metal-dependent hydrolase	R	conserved hypothetical protein
9367	1.38204909920506	2.2959849337463	0.778191666878118	4074	H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase	C	H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenease (hmd)
9368	1.46320352623048	2.38803402222858	0.850477440485086	502	Biotin synthase and related enzymes	H	biotin synthetase, putative (bioB)
9369	1.49700507101404	2.45774034964899	0.857816808793576	-	-	-	M. jannaschii predicted coding region MJ0785.1
9370	1.45477682789726	2.35869236073472	0.843325449724516	-	-	-	M. jannaschii predicted coding region MJ0786
9371	1.43655704506541	2.35741499920475	0.819766440509199	4018	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9372	1.43794693978934	2.26703003723659	0.910400740797524	-	-	-	M. jannaschii predicted coding region MJ0788
9373	1.37394030595301	2.18492982929536	0.838869633592361	-	-	-	M. jannaschii predicted coding region MJ0789
9374	1.45312297245958	2.40976084249643	0.848152321776297	1988	Predicted membrane-bound metal-dependent hydrolases	R	NADH dehydrogenase, subunit 1 isolog
9375	1.41839704533944	2.35405390364732	0.862003379750936	165	Argininosuccinate lyase	E	argininosuccinate lyase (argH)
9376	1.60150225323712	2.78403098357489	0.95971123073274	-	-	-	M. jannaschii predicted coding region MJ0792
9377	1.59972661999379	2.63858270473278	0.876084276678392	-	-	-	M. jannaschii predicted coding region MJ0792.1
9378	1.73628953927556	2.99299790162127	0.970018835687377	1300	Uncharacterized membrane protein	S	M. jannaschii predicted coding region MJ0793
9379	1.69590629492682	2.97730659095194	0.994649584454573	2881	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0794
9380	1.47645513652764	2.45489693888879	0.866159536845001	1361	S-layer domain	M	M. jannaschii predicted coding region MJ0795
9381	1.54771114891427	2.61244266853909	0.922731606356034	-	-	-	M. jannaschii predicted coding region MJ0795.1
9382	1.46161503381283	2.36662543976679	0.840983314974185	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	ABC transporter, ATP-binding protein
9383	1.62047941023409	2.71627733386813	0.962910983864218	-	-	-	M. jannaschii predicted coding region MJ0796.1
9384	1.43254482898689	2.42796894101739	0.835812512487966	577	ABC-type antimicrobial peptide transport system, permease component	V	hypothetical protein
9385	1.34751818355165	2.17684641927275	0.762708152680642	457	FOG: TPR repeat	R	conserved hypothetical protein
9386	1.39398758795423	2.2719923029756	0.812215024616833	2144	Selenophosphate synthetase-related proteins	R	phosphoribosylformylglycinamidine cyclo-ligase isolog (purM)
9387	1.3959799410062	2.37500228609704	0.859080921085345	1924	Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)	I	(R)-2-hydroxyglutaryl-CoA dehydratase activator
9388	1.58741724081329	2.52925100032318	0.848096136642796	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0801
9389	1.49839641561149	2.39696793111312	0.85416304038493	4051	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9390	1.67259825588833	2.68845778455708	0.906263828545602	-	-	-	M. jannaschii predicted coding region MJ0803
9391	1.46668777128251	2.37818513560441	0.841577859875607	535	Predicted Fe-S oxidoreductases	R	pyruvate formate-lyase activating enzyme (act)
9392	1.47557602163336	2.35771035128189	0.832407966563848	2029	Uncharacterized conserved protein	S	conserved hypothetical protein
9393	1.41977979495563	2.30061170441262	0.81145085565982	6	Xaa-Pro aminopeptidase	E	X-pro aminopeptidase (pepQ)
9394	1.40142907289553	2.2955099903995	0.86847143680721	3161	4-hydroxybenzoate synthetase (chorismate lyase)	H	conserved hypothetical protein
9395	1.52409414024295	2.41550133311046	0.864392094510539	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate-formate-lyase-activating enzyme (act)
9396	1.61136349850903	2.69446380986364	0.837813816662041	-	-	-	M. jannaschii predicted coding region MJ0808.1
9397	1.36160520449729	2.18005648327301	0.82633005110811	1254	Acylphosphatases	C	M. jannaschii predicted coding region MJ0809
9398	1.50806154499	2.42797537291701	0.861316973475865	2078	Uncharacterized conserved protein	S	conserved hypothetical protein
9399	1.5050385647407	2.45429260011242	0.879212243949054	2425	Uncharacterized protein containing a von Willebrand factor type A (vWA) domain	R	conserved hypothetical protein
9400	1.46131027604988	2.40304388526633	0.878726840880149	714	MoxR-like ATPases	R	conserved hypothetical protein
9401	1.46559816571569	2.39954026061234	0.842088641075806	1010	Precorrin-3B methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiH)
9402	1.5169088486492	2.4963516538108	0.881518642662754	1899	Deoxyhypusine synthase	O	deoxyhypusine synthase (dys1)
9403	1.44769336720164	2.35787342350171	0.802430822884892	1821	Predicted ATP-utilizing enzyme (ATP-grasp superfamily)	R	conserved hypothetical protein
9404	1.4030999882534	2.22633272675872	0.760628697077017	-	-	-	M. jannaschii predicted coding region MJ0816
9405	1.5279195550493	2.46803666364442	0.86620921087042	688	Phosphatidylserine decarboxylase	I	phosphatidylserine decarboxylase proenzyme 2 precursor (psd2)
9406	1.44311450760134	2.31760958407892	0.843347584953616	4085	Predicted RNA-binding protein, contains TRAM domain	R	M. jannaschii predicted coding region MJ0818
9407	1.39922315109705	2.22911404623551	0.831819237575952	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0819
9408	1.38308865421612	2.18747545481688	0.952519176888529	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0820
9409	1.51372752299648	2.56083486327042	1.04441359191378	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ0821
9410	1.40401923547927	2.26283674036366	0.732002605117758	-	-	-	S-layer structural protein
9411	1.2659129613638	2.05462281599107	0.741989571499578	3640	CO dehydrogenase maturation factor	D	CODH nickel-insertion accessory protein CooC (cooC)
9412	1.43949025745582	2.30437169552959	0.830613970703871	2896	Molybdenum cofactor biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaA)
9413	1.37062719422643	2.21765981227479	0.801259942943451	1047	FKBP-type peptidyl-prolyl cis-trans isomerases 2	O	peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (slyD)
9414	1.48952912259465	2.49925617179803	0.928017279980799	1585	Membrane protein implicated in regulation of membrane protease activity	OU	conserved hypothetical protein
9415	1.46515133559214	2.37277481348758	0.838327633988105	330	Membrane protease subunits, stomatin/prohibitin homologs	O	membrane protein, putative regulator of cation conductance
9416	1.37914379707758	2.2814991326011	0.945186670975572	-	-	-	conserved hypothetical protein
9417	1.45030273224836	2.39690520852898	0.869061316245282	1503	Peptide chain release factor 1 (eRF1)	J	peptide chain release factor aRF, subunit 1
9418	1.36774838330875	2.21007364868816	0.776635938585723	1606	ATP-utilizing enzymes of the PP-loop superfamily	R	conserved hypothetical protein
9419	1.56155756792304	2.53813413136071	0.922839061943226	608	Single-stranded DNA-specific exonuclease	L	conserved hypothetical protein
9420	1.45744928617597	2.35758559369181	0.84801340202955	1328	Oxygen-sensitive ribonucleoside-triphosphate reductase	F	anaerobic ribonucleoside-triphosphate reductase (nrdD)
9421	1.51342015106867	2.58049305288146	0.903142046970968	1991	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0832.1
9422	1.50936622320442	2.45335749234828	0.848654860397849	-	-	-	M. jannaschii predicted coding region MJ0833
9423	1.44749653389065	2.2625160692149	0.743313996938712	-	-	-	M. jannaschii predicted coding region MJ0834
9424	1.52225097444649	2.65540866823521	0.922143656867448	1627	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0835
9425	1.4889539517408	2.59793074755533	0.931001487590212	1991	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0835.1
9426	1.60105050150315	2.64851228674098	0.910028934183312	1989	Type II secretory pathway, prepilin signal peptidase PulO and related peptidases	NOU	conserved hypothetical protein
9427	1.33525514512684	2.05162684086636	0.803041503925103	2158	Uncharacterized protein containing a Zn-finger-like domain	R	M. jannaschii predicted coding region MJ0836
9428	1.35868205891985	2.23329836335317	0.834470416387616	3481	Predicted HD-superfamily hydrolase	R	cmp-binding-factor 1 isolog
9429	1.37189633762966	2.16454211144696	0.778975672392506	1810	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9430	1.37405111746092	2.18374405538597	0.757126717066583	1467	Eukaryotic-type DNA primase, catalytic (small) subunit	L	DNA primase, putative
9431	1.35684109395985	2.20136999172605	0.78027758688699	1548	Predicted transcriptional regulator/sugar kinase	KG	conserved hypothetical protein
9432	1.30790369577961	2.09707330371233	0.746768992407763	1625	Fe-S oxidoreductase, related to NifB/MoaA family	C	conserved hypothetical protein
9433	1.45528054188382	2.41981828339182	0.724524331993921	4054	Methyl coenzyme M reductase, beta subunit	H	methyl coenzyme M reductase I, subunit beta (mcrB)
9434	1.83758460990277	2.89771390776943	0.960861318906812	4055	Methyl coenzyme M reductase, subunit D	H	methyl coenzyme M reductase I, operon protein D (mcrD)
9435	1.8534730822505	3.0328219069339	1.00939343411024	4056	Methyl coenzyme M reductase, subunit C	H	methyl coenzyme M reductase I, operon protein C (mcrC)
9436	1.43977540787044	2.2290639679444	0.752987849866025	4057	Methyl coenzyme M reductase, gamma subunit	H	methyl coenzyme M reductase I, subunit gamma (mcrG)
9437	1.54010291110129	2.51545017561679	0.76714757077814	4058	Methyl coenzyme M reductase, alpha subunit	H	methyl coenzyme M reductase I, subunit alpha (mcrA)
9438	1.472279469316	2.49980003162513	0.883025052207567	4059	Tetrahydromethanopterin S-methyltransferase, subunit E	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit E (mtrE)
9439	1.48753788063743	2.59233123426122	0.932986543673725	4060	Tetrahydromethanopterin S-methyltransferase, subunit D	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit D (mtrD)
9440	1.49775255914197	2.56357759093644	0.915933458208492	4061	Tetrahydromethanopterin S-methyltransferase, subunit C	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit C (mrtC)
9441	1.53526771248115	2.50390168711572	0.938279696534477	4062	Tetrahydromethanopterin S-methyltransferase, subunit B	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit B (mrtB)
9442	1.44387897431583	2.4097311320196	0.886740123211983	4063	Tetrahydromethanopterin S-methyltransferase, subunit A	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit A (mtrA)
9443	1.55787720395058	2.71112073325406	1.01800911290298	4218	Tetrahydromethanopterin S-methyltransferase, subunit F	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit F (mtrF)
9444	1.74433549298838	2.89377964723394	0.986868454922417	4064	Tetrahydromethanopterin S-methyltransferase, subunit G	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit G (mtrG)
9445	1.43421161943604	2.36276605401459	0.817101709176528	1962	Tetrahydromethanopterin S-methyltransferase, subunit H	H	N5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit H (mtrH)
9446	1.54949430837472	2.50242427884127	0.817854049978972	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	M. jannaschii predicted coding region MJ0855
9447	1.51427413363825	2.46517383030565	0.911559903830143	4010	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9448	2.04354891212874	3.30885177361581	0.975421750406075	675	Transposase and inactivated derivatives	L	conserved hypothetical protein
9449	1.53162498195106	2.51751705652797	0.873042673262294	675	Transposase and inactivated derivatives	L	M. jannaschii predicted coding region MJ0857
9450	1.47801458410254	2.40420593779624	0.904067986836086	4009	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9451	1.35353090666759	2.11421503906889	0.83003619805412	4072	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0859
9452	1.35962835629376	2.1800408884332	0.814582796296422	142	Geranylgeranyl pyrophosphate synthase	H	bifunctional short chain isoprenyl diphosphate synthase (idsA)
9453	1.43659676987964	2.36495906091776	0.844854740384728	595	Predicted hydrolase of the metallo-beta-lactamase superfamily	R	conserved hypothetical protein
9454	1.36848569786166	2.29972814992303	0.814557699406373	1304	L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases	C	carotenoid biosynthetic gene ERWCRTS isolog
9455	1.46569524042178	2.34074245972934	0.850218258597823	2048	Heterodisulfide reductase, subunit B	C	heterodisulfide reductase, subunit B2 (hdrB2)
9456	1.27843330989063	2.07110580415443	0.799405729615102	1150	Heterodisulfide reductase, subunit C	C	heterodisulfide reductase, subunit C2 (hdrC2)
9457	1.48094754337274	2.40171269347362	0.821334701683984	1032	Fe-S oxidoreductase	C	conserved hypothetical protein
9458	1.45833151307719	2.22006091430635	0.829074243200741	537	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases	FGR	HIT family protein (hit)
9459	1.4843495582982	2.36586606743193	0.857172142709911	621	2-methylthioadenine synthetase	J	conserved hypothetical protein
9460	1.35320786421601	2.26820215009672	0.876117389192182	517	FOG: CBS domain	R	inosine-5'-monophosphate dehydrogenase (guaB)
9461	1.48079565374573	2.46624479193416	0.912247597250176	468	RecA/RadA recombinase	L	DNA repair protein RAD51 (radA)
9462	1.42550415571085	2.27839041948116	0.829134345679646	2221	Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits	C	coenzyme F420-reducing hydrogenase, beta subunit (frhB)
9463	1.52406897337478	2.61848913716604	0.92689530139252	3366	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9464	1.48767949177528	2.38673708048622	0.85642153974055	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	M. jannaschii predicted coding region MJ0872
9465	1.39776573872581	2.25260622650805	0.813523039335535	1120	ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components	PH	ferric enterobactin transport ATP-binding protein
9466	1.40179518032068	2.30054768137462	0.893671718820424	-	-	-	M. jannaschii predicted coding region MJ0874
9467	1.36264239611036	2.1896284434185	0.753490174795979	-	-	-	M. jannaschii predicted coding region MJ0875
9468	1.67203874586457	2.84913583208001	0.984311649519216	609	ABC-type Fe3+-siderophore transport system, permease component	P	iron(III) dicitrate transport system permease protein
9470	1.46439282175596	2.38475055244014	0.857626281907627	614	ABC-type Fe3+-hydroxamate transport system, periplasmic component	P	M. jannaschii predicted coding region MJ0878
9471	1.38744051386444	2.26914721765876	0.807298202268877	1348	Nitrogenase subunit NifH (ATPase)	P	nitrogenase iron protein (nifH)
9472	1.56470564786486	2.66805221397632	0.938936120074438	3366	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9473	1.48922181252896	2.40577269472154	0.876095924406412	78	Ornithine carbamoyltransferase	E	ornithine carbamoyltransferase (argF)
9474	1.40369742348534	2.24787960615299	0.841535728555557	2813	16S RNA G1207 methylase RsmC	J	conserved hypothetical protein
9475	1.45638015960107	2.33513245421329	0.81962801800938	2520	Predicted methyltransferase	R	conserved hypothetical protein
9476	1.48619301172413	2.44906974475793	0.870475266089803	470	ATPase involved in DNA replication	L	activator 1 (replication factor C), 53 KD subunit
9477	1.47690041894352	2.35536435852936	0.842725510821322	417	DNA polymerase elongation subunit (family B)	L	DNA polymerase B1
9478	1.41947505363412	2.33292428450326	0.844217158493897	303	Molybdopterin biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moeA)
9479	1.36668078723834	2.25472565645038	0.8548770635869	1920	Uncharacterized conserved protein	S	conserved hypothetical protein
9480	1.50951752665207	2.53002776765656	0.906407367641673	491	Zn-dependent hydrolases, including glyoxylases	R	conserved hypothetical protein
9481	1.50809670512795	2.48887572154044	0.865791382364563	-	-	-	M. jannaschii predicted coding region MJ0889
9482	1.44470623591314	2.34219584093599	0.863730755098121	1645	Uncharacterized Zn-finger containing protein	R	M. jannaschii predicted coding region MJ0890
9483	1.49242801148057	2.59389873585599	0.934426204091969	1681	Archaeal flagellins	N	flagellin B1 (flaB1)
9484	1.50047927416767	2.62601998839096	0.926542120767821	1681	Archaeal flagellins	N	flagellin B2 (flaB2)
9485	1.67139287886523	2.85653528386465	0.987830702859327	1681	Archaeal flagellins	N	flagellin B3 (flaB3)
9486	1.58090338376343	2.65928586635542	0.937075752568299	3352	Putative archaeal flagellar protein C	N	flagella-related protein C, putative
9487	1.55768492658106	2.58627275532895	0.909064450522729	3351	Putative archaeal flagellar protein D/E	N	flagella-related protein D, putative
9488	1.56198728555381	2.56262253272007	0.901168301663639	3351	Putative archaeal flagellar protein D/E	N	flagella-related protein E, putative
9489	1.82262687663787	3.05818766675625	0.961631744759871	3353	Putative archaeal flagellar protein F	N	conserved hypothetical protein
9490	1.54326229097234	2.72076037487053	0.961730892703144	3354	Putative archaeal flagellar protein G	N	flagella-related protein G, putative
9491	1.39540348710629	2.35425698109702	0.854952778973569	2874	Predicted ATPases involved in biogenesis of archaeal flagella	NU	flagella-related protein H, putative
9492	1.63862836183501	2.66017837145245	0.913454098611803	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein
9493	1.56305688764812	2.62312016391359	0.912897102604658	1955	Archaeal flagella assembly protein J	NU	conserved hypothetical protein
9494	1.59454043185519	2.64384477494472	0.935098344929942	1989	Type II secretory pathway, prepilin signal peptidase PulO and related peptidases	NOU	M. jannaschii predicted coding region MJ0902
9495	1.47177210233044	2.38910329709085	0.837972908440884	-	-	-	M. jannaschii predicted coding region MJ0903
9496	1.58844934416015	2.74952098789079	0.945357500677368	-	-	-	M. jannaschii predicted coding region MJ0904
9497	1.99922805062185	3.27314662135165	1.0294062171431	3373	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0905
9498	1.44733100104473	2.38662774146235	0.847511710542483	500	SAM-dependent methyltransferases	QR	M. jannaschii predicted coding region MJ0906
9499	1.44259783934938	2.29769998719932	0.814868263494672	641	Arylsulfatase regulator (Fe-S oxidoreductase)	R	chondro-6-sulfatase regulatory protein isolog
9500	1.49583777648856	2.39791195873838	0.848755839045429	1429	Cobalamin biosynthesis protein CobN and related Mg-chelatases	H	cobalamin biosynthesis protein (cobN)
9501	1.40649620315716	2.15032009703245	0.792733287657443	2026	Cytotoxic translational repressor of toxin-antitoxin stability system	JD	conserved hypothetical protein
9502	1.3926045858075	2.29812443854031	0.872222791077187	1240	Mg-chelatase subunit ChlD	H	magnesium chelatase
9503	1.43638141234617	2.2959576173151	0.830264187521015	1239	Mg-chelatase subunit ChlI	H	magnesium-chelatase subunit (chlI)
9504	1.49435536769339	2.38933229937315	0.871745064381245	639	Diadenosine tetraphosphatase and related serine/threonine protein phosphatases	T	conserved hypothetical protein
9505	1.39719610464509	2.32998755492443	0.824377509556451	452	Phosphopantothenoylcysteine synthetase/decarboxylase	H	pantothenate metabolism flavoprotein (dfp)
9506	1.45213704578702	2.36540244766172	0.865674670786515	1487	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein
9507	1.41540805232064	2.36896724719184	0.84165254713061	1712	Predicted dinucleotide-utilizing enzyme	R	conserved hypothetical protein
9508	1.60053938052096	2.62026231832322	0.981098067052053	1873	Uncharacterized conserved protein	S	conserved hypothetical protein
9509	1.47661534711319	2.45242328767537	0.864806346285494	483	Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family	G	conserved hypothetical protein
9510	1.37200825593319	2.30141466032	0.840891203225951	134	Indole-3-glycerol phosphate synthase	E	indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (trpC)
9511	1.51018377475544	2.50179120143853	0.887066603253427	2450	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ0919
9512	1.49249989373835	2.4315791567926	0.886048681488094	1100	GTPase SAR1 and related small G proteins	R	GTP-binding protein homologue (yphC)
9513	1.48478417361423	2.4853693356957	0.893878904391178	1571	Predicted DNA-binding protein containing a Zn-ribbon domain	R	conserved hypothetical protein
9514	1.46286979495196	2.43369454279586	0.852471358132393	517	FOG: CBS domain	R	conserved hypothetical protein
9515	1.55309891907191	2.58727956135676	0.879170095542212	-	-	-	M. jannaschii predicted coding region MJ0923
9516	1.6308229148682	2.76926957281185	0.96981950941457	455	ATPases involved in chromosome partitioning	D	capsular polysaccharide biosynthesis protein, putative (cap8B)
9517	1.59658049111407	2.67622044545523	0.927085591800534	1733	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ0925
9518	1.39681152323924	2.23589089978045	0.910049897106606	-	-	-	M. jannaschii predicted coding region MJ0926
9519	1.44203725121425	2.36609614963599	0.841671275570928	327	Uncharacterized conserved protein	S	conserved hypothetical protein
9520	1.44987815569952	2.36210844225295	0.809233638541728	2890	Methylase of polypeptide chain release factors	J	protoporphyrinogen oxidase (hemK)
9521	1.42819853472369	2.36933176036251	0.848985737532657	15	Adenylosuccinate lyase	F	adenylosuccinate lyase (purB)
9522	1.35759986646831	2.25230306302951	0.826435232907064	2082	Precorrin isomerase	H	cobalamin biosynthesis precorrin isomerase (cbiC)
9523	1.40156350420857	2.27535555213447	0.827153256947885	301	Thiamine biosynthesis ATP pyrophosphatase	H	conserved hypothetical protein
9524	1.31868484751708	2.23884165049479	0.95286993946406	2036	Histones H3 and H4	B	archaeal histone A2
9525	1.42946873034538	2.44888637752507	0.897773266983032	1836	Predicted membrane protein	S	conserved hypothetical protein
9526	1.47941483834913	2.41076477521842	0.846098800389895	1145	Ferredoxin	C	polyferredoxin (mvhB)
9527	1.36581893865224	2.22519032978935	0.80390495710042	2454	Uncharacterized conserved protein	S	conserved hypothetical protein
9528	1.48427470253061	2.38754440583757	0.851230768745364	622	Predicted phosphoesterase	R	conserved hypothetical protein
9529	1.36722488572943	2.22780742819519	0.80560864783278	151	Phosphoribosylamine-glycine ligase	F	phosphoribosylamine--glycine ligase (purD)
9530	1.61435128977236	2.7764657000543	0.979690009041857	390	ABC-type uncharacterized transport system, permease component	R	conserved hypothetical protein
9531	1.43087202420146	2.24768532831203	0.787205763474521	727	Predicted Fe-S-cluster oxidoreductase	R	M. jannaschii predicted coding region MJ0939
9532	1.54591178059473	2.52299493254098	0.849609932367929	457	FOG: TPR repeat	R	transformation sensitive protein
9533	1.5380823806006	2.46227146167728	0.878161384207725	457	FOG: TPR repeat	R	M. jannaschii predicted coding region MJ0941
9534	1.36963796911358	2.20831406943207	0.788330217212482	1199	Rad3-related DNA helicases	KL	ATP-dependent DNA helicase DinG, putative (dinG)
9535	1.39422830027011	2.31686517093427	0.762499855733822	-	-	-	M. jannaschii predicted coding region MJ0943
9536	1.39168580216277	2.32241158317932	0.829120532199137	1733	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ0944
9537	1.59175916546257	2.54743645980708	0.890601825861428	-	-	-	M. jannaschii predicted coding region MJ0945
9538	1.43475477709879	2.29257447723096	0.802627700804318	1867	N2,N2-dimethylguanosine tRNA methyltransferase	J	N2,N2-dimethylguanosine tRNA methyltransferase (trm1)
9539	1.40701833201141	2.234353424863	0.797511205572098	60	Isoleucyl-tRNA synthetase	J	isoleucyl-tRNA synthetase (ileS)
9540	1.4703718534241	2.43468421515703	0.85960972697514	-	-	-	M. jannaschii predicted coding region MJ0948
9541	1.47835113998788	2.38966826334322	0.916161835765586	1844	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9542	1.54220375372263	2.48152354906567	0.878747656445611	1458	Predicted DNA-binding protein containing PIN domain	R	conserved hypothetical protein
9543	1.50912253925834	2.44709142580327	0.863089713452418	1323	Predicted nucleotidyltransferase	R	conserved hypothetical protein
9544	1.2496289269359	2.11923186261619	0.798550920207296	1730	Predicted prefoldin, molecular chaperone implicated in de novo protein folding	O	conserved hypothetical protein
9545	1.39317980591661	2.36252645828857	0.945174307259383	1863	Multisubunit Na+/H+ antiporter, MnhE subunit	P	conserved hypothetical protein
9546	1.50677205514711	2.42971684821189	0.847543351172512	-	-	-	S-layer structural protein
9547	1.38206408044305	2.21423998302302	0.789723329402891	79	Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase	E	histidinol-phosphate aminotransferase (hisC)
9548	1.45695166363116	2.32965879329998	0.813269767983021	-	-	-	M. jannaschii predicted coding region MJ0956
9549	1.46405184728232	2.32061798633971	0.778557868611004	-	-	-	M. jannaschii predicted coding region MJ0957
9550	1.48807835822283	2.40904901861151	0.846920142386816	-	-	-	M. jannaschii predicted coding region MJ0958
9551	1.40925180912035	2.31602066766624	0.826505001217871	75	Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase	E	aspartate aminotransferase (aspC)
9552	1.39519017010839	2.28203593479109	0.823569088590496	176	Transaldolase	G	transaldolase
9553	1.42321464452727	2.30512058157785	0.828746528339741	1241	Predicted ATPase involved in replication control, Cdc46/Mcm family	L	cell division control protein 54 (cdc54)
9554	1.44853861672494	2.31578505440653	0.89619930063096	2023	RNase P subunit RPR2	J	conserved hypothetical protein
9555	1.50737225787046	2.50066260006527	0.898155055703534	146	N-methylhydantoinase B/acetone carboxylase, alpha subunit	EQ	hydantoin utilization protein B (hyuB)
9556	1.49807371555014	2.47133865606866	0.888033233383117	145	N-methylhydantoinase A/acetone carboxylase, beta subunit	EQ	hydantoin utilization protein A (hyuA)
9557	1.41748482885535	2.3248235266199	0.860892332713126	7	Uroporphyrinogen-III methylase	H	uroporphyrin-III C-methyltransferase (cobA)
9558	1.42759789841474	2.28213246281362	0.82780627123156	1032	Fe-S oxidoreductase	C	conserved hypothetical protein
9559	1.40867138552026	2.31994937366923	0.843725113569413	693	Putative intracellular protease/amidase	R	intracellular protease (pfpI)
9560	1.4656060366468	2.38635135000515	0.831416538742747	4087	Soluble P-type ATPase	R	copper transporting P type ATPase (copA)
9561	1.34048459105918	2.22168218193858	0.768706260481568	1829	Predicted archaeal kinase (sugar kinase superfamily)	R	conserved hypothetical protein
9562	1.40706579815628	2.26474923974586	0.868436397513424	2138	Uncharacterized conserved protein	S	conserved hypothetical protein
9563	1.40448418479685	2.39582171179398	0.854120493897721	750	Predicted membrane-associated Zn-dependent proteases 1	M	conserved hypothetical protein
9564	1.71765820535589	2.92718865408573	1.00130913468524	2095	Multiple antibiotic transporter	U	conserved hypothetical protein
9565	1.42494844474805	2.24227600205458	0.77043312635452	175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related e	EH	3-phosphoadenosine 5-phosphosulfate sulfotransferase (cysH)
9566	1.32660817032053	2.14906601779446	0.812055680066676	1848	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein
9567	1.45962381892916	2.45660980618543	0.966150572792559	2880	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ0975
9568	1.40225566085504	2.34367560063153	0.822405644528635	-	-	-	M. jannaschii predicted coding region MJ0976
9569	1.50997891388759	2.45162707503178	0.875208880104373	608	Single-stranded DNA-specific exonuclease	L	conserved hypothetical protein
9570	1.3398627245423	2.13811583102379	0.772485361549711	-	-	-	M. jannaschii predicted coding region MJ0978
9571	1.7871631232469	3.08586042693574	1.00184039732125	-	-	-	M. jannaschii predicted coding region MJ0979
9572	1.38091682690472	2.25198348927131	0.818392456244259	1890	Ribosomal protein S3AE	J	SSU ribosomal protein S3AE
9573	1.42010820810011	2.32168639669207	0.871333105635094	1326	Uncharacterized archaeal Zn-finger protein	R	conserved hypothetical protein
9574	1.44536340323389	2.30246487098246	0.809719337717957	52	Ribosomal protein S2	J	SSU ribosomal protein S2P
9575	1.37312122367552	2.17987361244254	0.76344734701476	1632	Ribosomal protein L15E	J	LSU ribosomal protein L15E (rpl15)
9576	1.65494438492088	2.70496570757976	0.839574443384961	-	-	-	restriction enzyme, type II R/M system 1
9577	1.45075923597001	2.34454558850898	0.821234362591677	863	DNA modification methylase	L	modification methylase, type II R/M system 1
9578	1.34761845247603	2.28417537580824	0.948071892285724	-	-	-	M. jannaschii predicted coding region MJ0986
9579	1.33684861351985	2.20895713842654	0.907474491601109	1382	Prefoldin, chaperonin cofactor	O	erpK protein isolog
9580	1.47701443753098	2.46107885324604	0.853782017756171	618	Exopolyphosphatase-related proteins	R	conserved hypothetical protein
9581	1.57530213854876	2.58909823018614	0.939887043324827	1553	Uncharacterized conserved protein involved in intracellular sulfur reduction	P	conserved hypothetical protein
9582	1.4424325947246	2.31561030767471	0.938345020345052	425	Predicted redox protein, regulator of disulfide bond formation	O	conserved hypothetical protein
9583	1.49478817505663	2.35375336372282	0.841544086442927	-	-	-	M. jannaschii predicted coding region MJ0991
9584	1.47772622027282	2.3746052099568	0.836114104765434	-	-	-	M. jannaschii predicted coding region MJ0992
9585	1.55166324220166	2.50196710928643	0.873779707830315	409	Hydrogenase maturation factor	O	hydrogenase expression/formation protein (hypD)
9586	1.43269444607106	2.32182444172986	0.833193213419531	1587	Uroporphyrinogen-III synthase	H	uroporphyrinogen III synthase (hemD)
9587	1.4718931423693	2.3229998658052	0.82879376497084	-	-	-	VAR1 protein isolog
9588	1.44953753374759	2.40179247305356	0.860617432980372	312	Predicted Zn-dependent proteases and their inactivated homologs	R	conserved hypothetical protein
9589	1.53692155843151	2.54481471704068	0.869738663673481	-	-	-	M. jannaschii predicted coding region MJ0998
9590	1.35430480881219	2.23036219447007	0.693615375433764	459	Chaperonin GroEL (HSP60 family)	O	thermosome (ths)
9591	1.49571168158287	2.37643024371198	0.846311567334758	124	Histidyl-tRNA synthetase	J	histidyl-tRNA synthetase (hisS)
9592	1.44658304367203	2.35233855005062	0.853713006661643	189	Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)	HJ	ribosomal protein S6 modification protein 2 (rimK)
9593	1.41553747099359	2.37163525305099	0.834592689334936	1624	Uncharacterized conserved protein	S	conserved hypothetical protein
9594	1.43449435419749	2.35431968084216	0.852183541087124	65	3-isopropylmalate dehydratase large subunit	E	3-isopropylmalate dehydratase (leuC)
9595	1.48087520323332	2.35913326501706	0.86919675364975	517	FOG: CBS domain	R	conserved hypothetical protein
9596	1.51371396673556	2.41587728971489	0.856867856285188	-	-	-	M. jannaschii predicted coding region MJ1005
9597	1.47467564867008	2.38633601306346	0.813850702610102	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ1006
9598	1.41644539935776	2.26947125104329	0.797817276775897	525	Valyl-tRNA synthetase	J	valyl-tRNA synthetase (valS)
9599	1.47308757674982	2.3457401044393	0.839839880145579	115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	EH	branched-chain amino acid aminotransferase (ilvE)
9600	1.34823482372126	2.23020553538313	0.820756297760782	704	Phosphate uptake regulator	P	phosphate transport system regulatory protein (phoU)
9601	1.49637888466294	2.41532322368922	0.844335378837086	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ1010
9602	1.57688681871826	2.57468998174533	0.892277086462667	704	Phosphate uptake regulator	P	peripheral membrane protein U (phoU)
9603	1.57698079270126	2.55421841706297	0.881437328747985	1117	ABC-type phosphate transport system, ATPase component	P	phosphate specific transport complex component (pstB)
9604	1.62623306773239	2.76571113708426	0.961407187868964	581	ABC-type phosphate transport system, permease component	P	phosphate transport system permease protein A (pstA)
9605	1.55785883308601	2.62532195834158	0.921449663612675	573	ABC-type phosphate transport system, permease component	P	phosphate transport system permease protein C (pstC)
9606	1.46981957267819	2.43777817694692	0.877112652201122	226	ABC-type phosphate transport system, periplasmic component	P	periplasmic phosphate-binding protein (pstS)
9607	1.59123567138624	2.58745092266904	0.915945230106958	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	M. jannaschii predicted coding region MJ1016
9608	1.36931552565578	2.21289399832722	0.830136550064289	-	-	-	M. jannaschii predicted coding region MJ1017
9609	1.448387227466	2.41011636471994	0.882516981451664	111	Phosphoglycerate dehydrogenase and related dehydrogenases	HE	phosphoglycerate dehydrogenase (serA)
9610	1.35214845351399	2.16772351962119	0.76537879794008	505	Carbamoylphosphate synthase small subunit	EF	carbamoyl-phosphate synthase, small (or glutamine) subunit (carA)
9611	1.43347303490699	2.39854166414352	0.880555645921224	3294	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1020
9612	1.46194824020906	2.37587754336331	0.830687987787588	-	-	-	M. jannaschii predicted coding region MJ1021
9613	1.53584745758835	2.51614460056374	0.880949804640637	1549	Queuine tRNA-ribosyltransferases, contain PUA domain	J	alignment in /usr/local/projects/ARG/Intergenic/ARG_R428_orf1.nr
9614	1.39394335463183	2.24351587583601	0.818070065905263	4152	ABC-type uncharacterized transport system, ATPase component	R	ABC transporter ATP-binding protein
9615	1.5412673491466	2.64371274422066	0.92787982930989	1668	ABC-type Na+ efflux pump, permease component	CP	conserved hypothetical protein
9616	1.42960305861899	2.40744027815837	0.878856249195319	3681	Uncharacterized conserved protein	S	conserved hypothetical protein
9617	1.40796361382177	2.29784985433558	0.827402799826868	422	Thiamine biosynthesis protein ThiC	H	thiamine biosynthesis protein (thiC)
9618	1.44056163466567	2.33379115259742	0.836958621478669	3261	Ni,Fe-hydrogenase III large subunit	C	formate hydrogenlyase, subunit 5
9619	1.42312260810988	2.32884235576069	0.837128341835381	1389	DNA topoisomerase VI, subunit B	L	DNA topoisomerase VI, subunit B (top6B)
9620	1.46945274284124	2.35882193066398	0.823775532982673	30	Dimethyladenosine transferase (rRNA methylation)	J	dimethyladenosine transferase (ksgA)
9621	1.34992713035145	2.22148839001843	0.832512760623544	1019	Predicted nucleotidyltransferase	R	conserved hypothetical protein
9622	1.63489334166732	2.81326370419657	0.97843126915664	679	Predicted permeases	R	conserved hypothetical protein
9623	1.52993022971977	2.58904956353895	0.935026038335392	2237	Predicted membrane protein	S	conserved hypothetical protein
9624	1.57604100894378	2.6012114830866	0.923771835194344	598	Mg2+ and Co2+ transporters	P	magnesium and cobalt transport protein (corA)
9625	1.32855850859606	2.11087292037923	0.908276505433723	1400	Signal recognition particle 19 kDa protein	U	signal recognition particle, subunit SRP19
9626	1.43667060054045	2.3665880763296	0.857423554461704	1927	Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase	C	N5,N10-methylene-tetrahydromethanopterin dehydrogenase (mtd)
9627	1.81531238854177	3.04376486299953	1.02138680243913	428	Predicted divalent heavy-metal cations transporter	P	M. jannaschii predicted coding region MJ1036
9628	1.42397112968612	2.32349177677681	0.846019060846027	133	Tryptophan synthase beta chain	E	tryptophan synthase beta subunit (trpB)
9629	1.42411387866822	2.32869897785321	0.855299252355233	159	Tryptophan synthase alpha chain	E	tryptophan synthase alpha subunit (trpA)
9630	1.46192996894891	2.36686562962672	0.919424809987648	2012	DNA-directed RNA polymerase, subunit H, RpoH/RPB5	K	DNA-directed RNA polymerase, subunit H (rpoH)
9631	1.44244035432444	2.35111633713095	0.837232640556179	85	DNA-directed RNA polymerase, beta subunit/140 kD subunit	K	DNA-directed RNA polymerase, subunit B'' (rpoB2)
9632	1.47668492675707	2.3805027218827	0.854409827619285	85	DNA-directed RNA polymerase, beta subunit/140 kD subunit	K	DNA-directed RNA polymerase, subunit B' (rpoB1)
9633	1.5066105015491	2.42285555575056	0.858337165614994	86	DNA-directed RNA polymerase, beta' subunit/160 kD subunit	K	DNA-directed RNA polymerase, subunit A' (rpoA1)
9634	1.44644682698552	2.38809293857061	0.856198991871764	1372	Intein/homing endonuclease	L	DNA-directed RNA polymerase, subunit A'' (rpoA2)
9635	1.63575537756614	2.65071558423434	0.97211043982662	1911	Ribosomal protein L30E	J	LSU ribosomal protein L30E
9636	1.34521688357307	2.11703874435799	0.804240829472158	195	Transcription elongation factor	K	putative transcription termination-antitermination factor (NusA)
9637	1.32654702797219	2.10164746219266	0.782118843898632	48	Ribosomal protein S12	J	SSU ribosomal protein S12P (rpsL)
9638	1.28947832794853	2.12357983565609	0.788122206869724	49	Ribosomal protein S7	J	SSU ribosomal protein S7P (rpsG)
9639	1.43948120993459	2.3613375321039	0.765033021861161	480	Translation elongation factors (GTPases)	J	translation elongation factor EF-2
9640	1.45319146932421	2.30510612995882	0.834534574458018	-	-	-	M. jannaschii predicted coding region MJ1049
9641	1.33565277399421	2.13622902699219	0.814266201557887	1936	Predicted nucleotide kinase (related to CMP and AMP kinases)	F	conserved hypothetical protein
9642	1.35657915939588	2.22119655365653	0.78880318042316	2192	Predicted carbamoyl transferase, NodU family	O	nodulation protein
9643	1.28629968059987	2.11781218122757	0.858657653226079	11	Uncharacterized conserved protein	S	conserved hypothetical protein
9644	1.41160201856898	2.33327931846331	0.882953492580179	1318	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ1053
9645	1.50939693561634	2.4386683609541	0.870933400834109	1372	Intein/homing endonuclease	L	UDP-glucose dehydrogenase, putative
9646	1.44069838522402	2.29110016178265	0.808888200736618	451	Nucleoside-diphosphate-sugar epimerases	MG	capsular polysaccharide biosynthesis protein I
9647	1.41942794858021	2.24233532803653	0.751474612053662	367	Asparagine synthase (glutamine-hydrolyzing)	E	asparagine synthetase (asnB)
9648	1.30553764500492	2.06658957043926	0.717155085862231	463	Glycosyltransferases involved in cell wall biogenesis	M	glycosyl transferase, putative
9649	1.36717724825746	2.18072101204234	0.74785792456496	2192	Predicted carbamoyl transferase, NodU family	O	nodulation protein
9650	1.45436080736945	2.3644790336406	0.814567210740745	438	Glycosyltransferase	M	capsular polysaccharide biosynthsis protein M
9651	1.3389246774841	2.09078976139761	0.720551739870062	-	-	-	M. jannaschii predicted coding region MJ1060
9652	1.37213429544482	2.23488147582262	0.780262967583108	1086	Predicted nucleoside-diphosphate sugar epimerases	MG	capsular polysaccharide biosynthesis protein D
9653	1.4369544975258	2.32973392265088	0.794473419945199	1670	Acetyltransferases, including N-acetylases of ribosomal proteins	J	spore coat polysaccharide biosynthesis protein G, putative (spsG)
9654	1.40367511128797	2.26137111555068	0.761359513958575	1861	Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog	M	spore coat polysaccharide biosynthesis protein F (spsF)
9655	1.38275435932394	2.31882378373047	0.864770150700583	110	Acetyltransferase (isoleucine patch superfamily)	R	galactoside acetyltransferase (lacA)
9656	1.48898020722749	2.45554402172423	0.860761566430911	2089	Sialic acid synthase	M	spore coat polysaccharide biosynthesis protein E
9657	1.43442626702018	2.35841979801029	0.806723556206538	399	Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogen	M	spore coat polysaccharide biosynthesis protein C (spsC)
9658	1.46489983764525	2.4484638314098	0.86751977617011	2244	Membrane protein involved in the export of O-antigen and teichoic acid	R	polysaccharide biosynthesis protein (capF) isolog
9659	1.34502752147254	2.15627485894761	0.757067739676871	438	Glycosyltransferase	M	galactosyltransferase isolog
9660	1.4046387441957	2.30513509947872	0.798050681673683	-	-	-	M. jannaschii predicted coding region MJ1070
9661	1.39208471612876	2.20101832309704	0.793251125925683	608	Single-stranded DNA-specific exonuclease	L	M. jannaschii predicted coding region MJ1071
9662	1.56888692827884	2.53697300145918	0.880370838052006	-	-	-	M. jannaschii predicted coding region MJ1072
9663	1.50728389190041	2.37718151855169	0.849131720162201	478	RIO-like serine/threonine protein kinase fused to N-terminal HTH domain	T	conserved hypothetical protein
9664	1.34664196876337	2.19824801373327	0.883405678376318	-	-	-	M. jannaschii predicted coding region MJ1074
9665	1.45199628653257	2.35667460886545	0.843521455358154	147	Anthranilate/para-aminobenzoate synthases component I	EH	anthranilate synthase component I (trpE)
9666	1.48069449608378	2.40294265294335	0.793318857961476	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ1076
9667	1.38467591429571	2.18990183794204	0.773568802781093	172	Seryl-tRNA synthetase	J	seryl-tRNA synthetase (serS)
9668	1.54365089458034	2.61997840468032	0.895033587010799	392	Predicted integral membrane protein	S	M. jannaschii predicted coding region MJ1078
9669	1.46029340487889	2.50401356360368	0.883306525085315	1784	Predicted membrane protein	S	conserved hypothetical protein
9670	1.51670968347988	2.48860757055128	0.927484564895277	-	-	-	M. jannaschii predicted coding region MJ1080
9671	1.49569744084339	2.49803291605347	0.918670374440088	432	Uncharacterized conserved protein	S	conserved hypothetical protein
9672	1.4331729510276	2.24948112965602	0.853748593885742	3355	Predicted transcriptional regulator	K	conserved hypothetical protein
9673	1.32866921239887	2.19105977408065	0.833915308593057	655	Multimeric flavodoxin WrbA	R	iron-sulfur flavoprotein (isf)
9674	1.35941823685277	2.22336826517396	0.801703379362129	169	Shikimate 5-dehydrogenase	E	shikimate 5-dehydrogenase (aroE)
9675	1.41443001958355	2.29145434785935	0.7789363249808	-	-	-	M. jannaschii predicted coding region MJ1085
9676	1.32260142188537	2.07634798125601	0.722385920817034	1665	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9677	1.40962003347893	2.33100524721878	0.851263506991322	1577	Mevalonate kinase	I	mevalonate kinase
9678	1.5557074537128	2.47815096182603	0.852664399110884	1122	ABC-type cobalt transport system, ATPase component	P	cobalt transport ATP-binding protein (cbiO)
9679	1.51988726583644	2.51149600683331	0.878058354878951	619	ABC-type cobalt transport system, permease component CbiQ and related transporters	P	cobalt transport protein (cbiQ)
9680	1.46149123020576	2.49451652486708	0.94822523161024	1930	ABC-type cobalt transport system, periplasmic component	P	cobalt transport protein (cbiN)
9681	1.72252714582607	2.94387075357587	1.00245464494472	310	ABC-type Co2+ transport system, permease component	P	cobalamin biosynthesis protein (cbiM)
9682	1.56991287795187	2.75526693260588	0.960975302432302	2215	ABC-type uncharacterized transport system, permease component	R	urease accesory protein (ureH)
9683	1.50965567427658	2.40349964374132	0.88160695069177	535	Predicted Fe-S oxidoreductases	R	nifB protein (nifB)
9684	1.43034443011087	2.31842154251126	0.835703248273667	1944	Uncharacterized conserved protein	S	conserved hypothetical protein
9685	1.5164106212441	2.42066062333691	0.856072449013047	1571	Predicted DNA-binding protein containing a Zn-ribbon domain	R	conserved hypothetical protein
9686	1.38359788317488	2.25563731504459	0.813656832074859	2	Acetylglutamate semialdehyde dehydrogenase	E	N-acetyl-gamma-glutamyl-phosphate reductase (argC)
9687	1.44084087344116	2.35851566881618	0.85809497147797	19	Diaminopimelate decarboxylase	E	diaminopimelate decarboxylase (lysA)
9688	1.69858160952406	2.67840393390873	0.821631587933363	-	-	-	RNA maturase isolog
9689	1.38015084744012	2.27614170627927	0.847250081068843	1891	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9690	1.40974336876129	2.30176221939713	0.807120476327159	1109	Phosphomannomutase	G	phosphomannomutase (pmmB)
9691	1.33249888048346	2.15382858069532	0.761538725171955	1208	Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translati	MJ	glucose-1-phosphate thymidylyltransferase (strD)
9692	1.45066678737304	2.32659043152196	0.884031491164392	717	Deoxycytidine deaminase	F	deoxycytidine triphosphate deaminase, putative (dcd)
9693	1.37863050095847	2.15131639342095	0.889768177573271	2026	Cytotoxic translational repressor of toxin-antitoxin stability system	JD	conserved hypothetical protein
9694	1.42055475850527	2.33592930807183	0.838010133740849	83	Homoserine kinase	E	homoserine kinase (thrB)
9695	1.48452435551059	2.48258356148845	0.888849217147938	569	K+ transport systems, NAD-binding component	P	TRK system potassium uptake protein (trkA)
9696	1.47881357828769	2.35474944002195	0.863411241249958	1790	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9697	1.42643733905836	2.30649894627116	0.825385696610643	-	-	-	M. jannaschii predicted coding region MJ1107
9698	1.35031483633406	2.18236766002774	0.790664532628167	72	Phenylalanyl-tRNA synthetase beta subunit	J	phenylalanyl-tRNA synthetase, subunit beta (pheT)
9699	1.53175519545455	2.52484246263283	0.886506092009214	461	Orotate phosphoribosyltransferase	F	orotate phosphoribosyl transferase (pyrE)
9700	1.41328119328542	2.29226053316992	0.827232236237647	1771	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9701	1.54218615440804	2.46913445943758	0.874689066826583	1746	tRNA nucleotidyltransferase (CCA-adding enzyme)	J	tRNA nucleotidyltransferase (cca)
9702	1.47407101232255	2.47999900895514	0.89486711944352	472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	M	N-acetylglucosamine-1-phosphate transferase
9703	1.5141234471563	2.55887622063294	0.928640366875656	-	-	-	M. jannaschii predicted coding region MJ1114
9704	1.53897893203823	2.52543974476316	0.89798524525607	434	Predicted TIM-barrel enzyme	R	conserved hypothetical protein
9705	1.54670448601987	2.5080384207397	0.846278821437492	367	Asparagine synthase (glutamine-hydrolyzing)	E	asparagine synthetase (asnB)
9706	1.48905555306673	2.44729823776721	0.85126328014405	2266	GTP:adenosylcobinamide-phosphate guanylyltransferase	H	conserved hypothetical protein
9707	1.50093502521293	2.42683699512414	0.929477956494704	1873	Uncharacterized conserved protein	S	conserved hypothetical protein
9708	1.42410805384125	2.25736744651806	0.840040387752418	253	Diaminopimelate epimerase	E	diaminopimelate epimerase (dapF)
9709	1.44798485896973	2.36394984326579	0.831722128979952	583	Transcriptional regulator	K	conserved hypothetical protein
9710	1.40312631947918	2.33379014872428	0.851810141954484	1487	Predicted nucleic acid-binding protein, contains PIN domain	R	virulence associated protein C (vapC)
9711	1.41519686344034	2.33021418674189	0.922091712929439	1753	Uncharacterized conserved protein	S	conserved hypothetical protein
9712	1.26760707979705	2.05091369866714	0.739452240612792	500	SAM-dependent methyltransferases	QR	conserved hypothetical protein
9713	1.49523545191588	2.41751439049858	0.860461523594809	1204	Superfamily II helicase	R	putative SKI2-family helicase
9714	1.48011245183839	2.45043474557601	1.03436424884435	-	-	-	conserved hypothetical protein
9715	1.47622922140718	2.41318049296113	0.868883844090936	2262	GTPases	R	GTP-binding protein, member of GTP1/OBG-family
9716	1.39847392362154	2.24796954485241	0.830021207708229	1831	Predicted metal-dependent hydrolase (urease superfamily)	R	conserved hypothetical protein
9717	1.55935982339213	2.46855338651905	0.853982167281256	-	-	-	conserved hypothetical protein
9718	1.62274429247864	2.61134742401133	0.97038052681677	2151	Predicted metal-sulfur cluster biosynthetic enzyme	R	conserved hypothetical protein
9719	1.56581411976528	2.52716747385094	0.901316721892309	3642	Mn2+-dependent serine/threonine protein kinase	T	O-sialoglycoprotein endopeptidase (gcp)
9720	1.48792510448591	2.40551284626483	0.854557788751065	519	GMP synthase, PP-ATPase domain/subunit	F	GMP synthase (guaA)
9721	1.57741921318319	2.55672313118721	0.81978589165596	1745	Predicted metal-binding protein	R	conserved hypothetical protein
9722	1.47521651858583	2.38396152538142	0.837624366053939	43	3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases	H	conserved hypothetical protein
9723	1.41680969758358	2.25743827349193	0.786048842665899	1354	Uncharacterized conserved protein	S	conserved hypothetical protein
9724	1.36155046711828	2.25219449653142	0.872442485615877	315	Molybdenum cofactor biosynthesis enzyme	H	molybdenum cofactor biosynthesis protein (moaC)
9725	1.51494882317548	2.44505811422683	0.868721006935361	1243	Histone acetyltransferase	KB	conserved hypothetical protein
9726	1.44084335283898	2.40625059598956	0.868768862381082	170	Dolichol kinase	I	conserved hypothetical protein
9727	1.46897807187339	2.484423590637	0.919158872931898	-	-	-	M. jannaschii predicted coding region MJ1138
9728	1.44642793937827	2.29852683789277	0.804404131640343	1603	RNase P/RNase MRP subunit p30	J	M. jannaschii predicted coding region MJ1139
9729	1.43558806555828	2.38908224846115	0.842115502666728	2045	Phosphosulfolactate phosphohydrolase and related enzymes	HR	conserved hypothetical protein
9730	1.67450203997398	2.72298427097423	0.955333094290178	1852	Uncharacterized conserved protein	S	conserved hypothetical protein
9731	1.51697516162593	2.46137443906286	0.872337369092186	3	Oxyanion-translocating ATPase	P	arsenical pump-driving ATPase (arsA)
9732	1.55731808581232	2.60914632572973	0.920173842541546	668	Small-conductance mechanosensitive channel	M	conserved hypothetical protein
9733	1.46523025796927	2.34436934824882	0.810842938728946	2073	Cobalamin biosynthesis protein CbiG	H	cobalamin biosynthesis protein (cbiG)
9734	1.44433127454028	2.4134884335994	1.00908858670536	-	-	-	M. jannaschii predicted coding region MJ1145
9735	1.42725004665183	2.32817203932678	0.857155603745803	57	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	G	glyceraldehyde 3-phosphate dehydrogenase
9736	1.33228635134847	2.18454268066101	0.751991926804869	-	-	-	M. jannaschii predicted coding region MJ1147
9737	1.34688557039463	2.13351637836485	0.820346740078077	1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	K	transcription-associated protein ('TFIIS')
9738	1.5109773718124	2.40613004396346	0.872081796348201	1051	ADP-ribose pyrophosphatase	F	mutator MutT protein, putative (mutT)
9739	1.49389091939892	2.34797842762827	0.851789812736206	1628	Uncharacterized conserved protein	S	conserved hypothetical protein
9740	1.26317715800489	1.95709200697655	0.723878891153302	-	-	-	M. jannaschii predicted coding region MJ1151
9741	1.40599910726334	2.19173291349124	0.874202307278516	-	-	-	M. jannaschii predicted coding region MJ1152
9742	1.25325576177347	2.00995466909055	0.873697190149175	-	-	-	M. jannaschii predicted coding region MJ1153
9743	1.48168068754162	2.42796838239124	0.875552567814292	1078	HD superfamily phosphohydrolases	R	conserved hypothetical protein
9744	1.39224524461978	2.22862055861812	0.792662459710243	1032	Fe-S oxidoreductase	C	conserved hypothetical protein
9745	1.44901355953452	2.60750166489965	0.989018811754142	-	-	-	conserved hypothetical protein
9746	1.50333170707579	2.62890430264875	1.02163607269688	-	-	-	M. jannaschii predicted coding region MJ1155.2
9747	1.38823913620549	2.27472674252705	0.779560930719247	464	ATPases of the AAA+ class	O	cell division control protein 48 (cdc48), AAA family
9748	1.33208103410792	2.1184043567686	0.862171528331566	-	-	-	M. jannaschii predicted coding region MJ1158
9749	1.37144940633022	2.18186443244611	0.779129447635361	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein
9750	1.33222529942053	2.14822126908712	0.760539763571744	1599	Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-bin	L	replication factor A related protein
9751	1.40709033672671	2.31782396650702	0.836784483605164	154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases	J	amidase
9752	1.49895437632489	2.54864554700406	0.89712567567935	-	-	-	M. jannaschii predicted coding region MJ1161
9753	1.36786470098351	2.17322232259664	0.763514679477191	2129	Predicted phosphoesterases, related to the Icc protein	R	conserved hypothetical protein
9754	1.42110861173215	2.3420280089824	0.869452620271735	2220	Predicted Zn-dependent hydrolases of the beta-lactamase fold	R	conserved hypothetical protein
9755	1.49242270082871	2.42871830219191	0.864752607939605	1395	Predicted transcriptional regulator	K	conserved hypothetical protein
9756	1.59429309112453	2.68534104914951	0.933417524899628	1146	Ferredoxin	C	formylmethanofuran dehydrogenase, subunit E (tungsten) (fwdE)
9757	1.4002703881642	2.24278293868102	0.772936103305961	1145	Ferredoxin	C	formylmethanofuran dehydrogenase, subunit F (tungsten) (fwdF)
9758	1.28687064815222	2.02176632361418	0.896194750089865	1145	Ferredoxin	C	formylmethanofuran dehydrogenase, subunit G (tungsten) (fwdG)
9759	1.40752262134243	2.22692603328691	0.841574675550548	1153	Formylmethanofuran dehydrogenase subunit D	C	formylmethanofuran dehydrogenase, subunit D (tungsten) (fwdD)
9760	1.46332121763423	2.37512136854136	0.828118806528657	1229	Formylmethanofuran dehydrogenase subunit A	C	formylmethanofuran dehydrogenase, subunit A (tungsten) (fwdA)
9761	1.5670169134387	2.60391953761217	0.991189952188404	393	Uncharacterized conserved protein	S	conserved hypothetical protein
9762	1.33738794694873	2.21645180205353	0.793590740266494	2218	Formylmethanofuran dehydrogenase subunit C	C	formylmethanofuran dehydrogenase, subunit C (tungsten) (fwdC)
9763	1.40692686074014	2.29695212082721	0.865737381483314	-	-	-	M. jannaschii predicted coding region MJ1172
9764	1.47413796647352	2.25792721276135	0.902820195215304	2026	Cytotoxic translational repressor of toxin-antitoxin stability system	JD	conserved hypothetical protein
9765	1.43585346317381	2.33258673984111	0.829619738948848	504	CTP synthase (UTP-ammonia lyase)	F	CTP synthase (pyrG)
9766	1.41723180557577	2.32871061577401	0.84329850116624	82	Chorismate synthase	E	chorismate synthase (aroC)
9767	1.45499721761074	2.33870115338866	0.846695795669012	1222	ATP-dependent 26S proteasome regulatory subunit	O	proteasome regulatory AAA-ATPase
9768	1.50701420142462	2.45651344833382	0.843339642469161	438	Glycosyltransferase	M	conserved hypothetical protein
9769	1.66145128379199	2.78391471617979	0.987621667871104	628	Predicted permease	R	conserved hypothetical protein
9770	1.4830479103155	2.36415883983456	0.879483668686975	615	Cytidylyltransferase	MI	glycerol-3-phosphate cytidyltransferase (taqD)
9771	1.55307339530523	2.52282829264493	0.886558768509792	-	-	-	M. jannaschii predicted coding region MJ1180
9772	1.47479099919028	2.45117772471785	0.90454221977773	715	ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components	P	M. jannaschii predicted coding region MJ1181
9773	1.50848846247031	2.43597092290061	0.834047937918152	644	Dehydrogenases (flavoproteins)	C	conserved hypothetical protein
9774	1.60909091047897	2.54772214206188	0.883891307442979	4090	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9775	1.46919150325996	2.3790574480205	0.896992032323959	1731	Archaeal riboflavin synthase	H	riboflavin synthase (ribC)
9776	1.40280537444515	2.24993813667169	0.788427431854752	2414	Aldehyde:ferredoxin oxidoreductase	C	putative aldehyde ferredoxin oxidoreductase (aor)
9777	1.45750829898156	2.35914415419821	0.847229809642784	725	ABC-type molybdate transport system, periplasmic component	P	conserved hypothetical protein
9778	1.38832790415411	2.20916756343708	0.799454867034103	1082	Sugar phosphate isomerases/epimerases	G	conserved hypothetical protein
9779	1.45076008467105	2.39207946674469	0.848304958408075	1397	ADP-ribosylglycohydrolase	O	dinitrogenase reductase activating glycohydrolase (draG)
9780	1.55636313583396	2.61921006436373	0.893863242512893	-	-	-	M. jannaschii predicted coding region MJ1189
9781	1.5216928600468	2.46784681116728	0.857161845286476	1148	Heterodisulfide reductase, subunit A and related polyferredoxins	C	Heterodisulfide reductase, subunit A
9782	1.85620445039449	3.01418554684814	1.0031047178808	1908	Coenzyme F420-reducing hydrogenase, delta subunit	C	Coenzyme F420-reducing hydrogenase, delta subunit
9783	1.47978012737286	2.40715987828204	0.871251517094174	1941	Coenzyme F420-reducing hydrogenase, gamma subunit	C	methylviologen-reducing hydrogenase, gamma chain (vhuG)
9785	1.59903069993916	2.56900817484105	0.88181989029346	1145	Ferredoxin	C	polyferredoxin (mvhB)
9786	1.54390642620134	2.46445446523797	0.855247850962332	1029	Formylmethanofuran dehydrogenase subunit B	C	formylmethanofuran dehydrogenase (tungsten), subunit B, selenocysteine-containing
9787	1.42017049685419	2.37177629753044	0.844989831382674	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA)
9788	1.66530497872422	2.8714883159421	0.982170172583826	531	Amino acid transporters	E	asoB protein
9789	1.44186900845357	2.3153064313143	0.827022259255209	441	Threonyl-tRNA synthetase	J	threonyl-tRNA synthetase (thrS)
9790	1.46479915162421	2.32533060010376	0.825864202724682	1107	Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain	L	conserved hypothetical protein
9791	1.39968954620521	2.30045122541741	0.877732616465471	4080	RecB-family nuclease	L	M. jannaschii predicted coding region MJ1199
9792	1.48963107779843	2.35584163436683	0.849869006904583	270	Site-specific DNA methylase	L	modification methylase, type II R/M system
9793	1.38351570990403	2.22821022429891	0.951482635275312	2075	Ribosomal protein L24E	J	LSU ribosomal protein L24E
9794	1.30156429362551	2.04656646508074	0.901918732081625	2053	Ribosomal protein S28E/S33	J	SSU ribosomal protein S28E
9795	1.38036838171207	2.29849676245416	0.862970863841913	1358	Ribosomal protein HS6-type (S12/L30/L7a)	J	LSU ribosomal protein L7AE
9796	1.42822916399997	2.36345365624794	0.8756553753658	40	ATP phosphoribosyltransferase	E	ATP phosphoribosyltransferase (hisG)
9797	1.6107811833798	2.62908496429807	0.901260419335584	1745	Predicted metal-binding protein	R	conserved hypothetical protein
9798	1.50213229928876	2.49215135912578	0.897175037374521	358	DNA primase (bacterial type)	L	conserved hypothetical protein
9799	1.46275464914939	2.29822262817472	0.84212355421566	454	Histone acetyltransferase HPA2 and related acetyltransferases	KR	protease synthase and sporulation negative regulator Pai1, putative
9800	1.36795850614433	2.2331284275014	0.804720553258174	1812	Archaeal S-adenosylmethionine synthetase	E	conserved hypothetical protein
9802	1.55498115513307	2.51896108482137	0.89481417555655	2047	Uncharacterized protein (ATP-grasp superfamily)	R	conserved hypothetical protein
9803	1.52928485935609	2.45944505960939	0.90917682228453	2112	Predicted Ser/Thr protein kinase	T	M. jannaschii predicted coding region MJ1211
9804	1.63812924348229	2.82529401420114	1.00574801751087	1183	Phosphatidylserine synthase	I	CDP-diacylglycerol--serine O-phosphatidyltransferase (pssA)
9805	1.54589674262197	2.53744947849892	0.913504013812148	1451	Predicted metal-dependent hydrolase	R	M. jannaschii predicted coding region MJ1213
9806	1.42358418198906	2.29043772635137	0.791730251818892	610	Type I site-specific restriction-modification system, R (restriction) subunit and related helicases	V	type I restriction-modification enzyme 1, R subunit
9807	1.44658652752655	2.36827441940979	0.898522198438365	1669	Predicted nucleotidyltransferases	R	conserved hypothetical protein
9808	1.48045999473406	2.32828931292181	0.873928288391127	2361	Uncharacterized conserved protein	S	conserved hypothetical protein
9809	1.50996608486052	2.55040112134219	0.925021351677768	1669	Predicted nucleotidyltransferases	R	conserved hypothetical protein
9810	1.46101692348576	2.36540578509633	0.809908723195546	732	Restriction endonuclease S subunits	V	type I restriction-modification enzyme 1, S subunit
9811	1.59601881794955	2.73733477447131	0.95363483439078	-	-	-	M. jannaschii predicted coding region MJ1219
9812	1.44569937376267	2.30662512671424	0.77302871078175	286	Type I restriction-modification system methyltransferase subunit	V	type I restriction-modification enzyme 1, M subunit
9813	1.50963889281789	2.63291752804421	0.937449672780207	1808	Predicted membrane protein	S	M. jannaschii predicted coding region MJ1221
9814	1.51091212012352	2.47152905860302	0.854229999389379	463	Glycosyltransferases involved in cell wall biogenesis	M	dolichol-P-glucose synthetase isolog
9815	1.6466543964137	2.827949349381	0.987282850375901	-	-	-	M. jannaschii predicted coding region MJ1223
9816	1.50881057410398	2.50160697856582	0.948015772384088	2083	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9817	1.53755453335544	2.48775340604845	0.885220451390618	517	FOG: CBS domain	R	conserved hypothetical protein
9818	1.50853909871922	2.52387719222169	0.898774740123327	474	Cation transport ATPase	P	plasma membrane ATPase 1 (aha1)
9819	1.40087481138223	2.21323976020712	0.785749985710024	1180	Pyruvate-formate lyase-activating enzyme	O	pyruvate formate-lyase activating enzyme (act)
9820	1.31226454790867	2.15413641649506	0.837289478639702	231	Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)	J	translation initiation factor aIF-5A
9821	1.42501156340858	2.38371051111031	0.878208578519885	439	Biotin carboxylase	I	biotin carboxylase (accC)
9822	1.28566399012931	2.07205898886	0.891591456692238	3478	Predicted nucleic-acid-binding protein containing a Zn-ribbon domain	R	M. jannaschii predicted coding region MJ1230
9823	1.46137195509591	2.36776434785175	0.839313497439594	511	Biotin carboxyl carrier protein	I	oxaloacetate decarboxylase alpha chain (oadA)
9824	1.41870600789303	2.28940503120234	0.845652671678174	2524	Predicted transcriptional regulator, contains C-terminal CBS domains	K	conserved hypothetical protein
9825	1.45493699148646	2.32754753569579	0.825603495390564	2521	Predicted archaeal methyltransferase	R	M. jannaschii predicted coding region MJ1233
9826	1.39373036647991	2.15448796753434	0.73729163609512	1583	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	conserved hypothetical
9827	1.3224869600434	2.15244367998922	0.770131608192227	1850	Ribulose 1,5-bisphosphate carboxylase, large subunit	G	ribulose bisphosphate carboxylase, large subunit (rbcL)
9828	1.43752054816199	2.34820250157167	0.853635821165205	1782	Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH d	R	putative mRNA 3'-end processing factor 2
9829	1.45813236865006	2.47483262422617	0.923900906524667	638	20S proteasome, alpha and beta subunits	O	proteasome, subunit beta (psmB)
9830	1.43709704257106	2.31462666781035	0.827925815195463	442	Prolyl-tRNA synthetase	J	prolyl-tRNA synthetase (proS)
9831	1.33066786025884	2.15173894721489	0.780980742752416	-	-	-	M. jannaschii predicted coding region MJ1239
9832	1.46122353491513	2.42350222166657	0.890496973272182	-	-	-	M. jannaschii predicted coding region MJ1240
9833	1.59900427301392	2.61911349870402	1.0475836603247	-	-	-	M. jannaschii predicted coding region MJ1241
9834	1.42781071515687	2.34893680559969	0.852344472457413	1123	ATPase components of various ABC-type transport systems, contain duplicated ATPase	R	methyl coenzyme M reductase system, component A2 (atwA)
9835	1.40177008030642	2.28521499188468	0.931489900490052	1342	Predicted DNA-binding proteins	R	conserved hypothetical protein
9836	1.49523580876473	2.51095584514733	0.919909532941167	4075	Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII	S	conserved hypothetical protein
9837	1.41507073190739	2.27066428629069	0.918643802491637	4075	Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII	S	M. jannaschii predicted coding region MJ1245
9838	1.36942010327842	2.28536697768953	0.835500740187523	74	Succinyl-CoA synthetase, alpha subunit	C	succinyl-CoA synthetase, alpha subunit (sucD)
9839	1.47087939997035	2.4501111709006	0.876038348301369	794	Predicted sugar phosphate isomerase involved in capsule formation	M	conserved hypothetical protein
9840	1.37676236775142	2.28528975167591	0.915547770420976	-	-	-	M. jannaschii predicted coding region MJ1248
9841	1.46315028937596	2.41100585320482	0.855930360784725	1465	Predicted alternative 3-dehydroquinate synthase	E	conserved hypothetical protein
9842	1.49549263848825	2.45106800794034	0.876975482263407	-	-	-	M. jannaschii predicted coding region MJ1249.1
9843	1.40307425808796	2.35150548997948	0.873239406575409	1646	Predicted phosphate-binding enzymes, TIM-barrel fold	R	conserved hypothetical protein
9844	1.41274659178674	2.24491589472317	0.812565649884008	500	SAM-dependent methyltransferases	QR	gerC2 protein
9845	1.44349501855442	2.38058560156705	0.840285031320248	4016	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9846	1.55256214761364	2.68132071397544	0.940450377448089	341	Preprotein translocase subunit SecF	U	protein translocase, subunit SECF (secF)
9847	1.44580776282364	2.43069072796236	0.840152417637784	2512	Uncharacterized membrane-associated protein/domain	S	M. jannaschii predicted coding region MJ1254
9848	1.43954618352953	2.33052682151523	0.8208283339464	1819	Glycosyl transferases, related to UDP-glucuronosyltransferase	GC	M. jannaschii predicted coding region MJ1255
9849	1.48165693339561	2.39535598126978	0.840703846356985	391	Uncharacterized conserved protein	S	conserved hypothetical protein
9850	1.4902835719789	2.40724024876272	0.839266196017632	1818	Predicted RNA-binding protein, contains THUMP domain	R	M. jannaschii predicted coding region MJ1257
9851	1.64964218112505	2.76913758394936	1.0420668425345	2036	Histones H3 and H4	B	archaeal histone A3
9852	1.42158208804355	2.41476905190294	0.889053772308222	528	Uridylate kinase	F	uridylate kinase (pyrH)
9853	1.35471901895582	2.1749878372412	0.859418168074234	2125	Ribosomal protein S6E (S10)	J	SSU ribosomal protein S6E
9854	1.4028540848224	2.33829791739646	0.856512097759957	5257	Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase)	J	translation initiation factor aIF-2, subunit gamma (aif2G)
9855	1.41973089907092	2.30917669517842	0.807402602283149	1630	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9856	1.45675387810458	2.3252959812778	0.828040583552155	143	Methionyl-tRNA synthetase	J	methionyl-tRNA synthetase (metS)
9857	1.38659420454062	2.27014142818197	0.811596052643443	46	Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain	F	phosphoribosylformylglycinamidine synthase II (purL)
9858	1.31225669652429	2.13651983476818	0.823926341964874	105	Nucleoside diphosphate kinase	F	nucleoside diphosphate kinase, (ndk)
9859	1.47908199314776	2.44287414968244	0.875361133842311	683	ABC-type branched-chain amino acid transport systems, periplasmic component	E	high-affinity branched-chain amino acid transport protein (braC)
9860	1.48906873611878	2.43339435158074	0.873712591169589	411	ABC-type branched-chain amino acid transport systems, ATPase component	E	high-affinity branched-chain amino acid transport ATP-binding protein (braF)
9861	1.51604754738509	2.49651878175195	0.891463757209227	410	ABC-type branched-chain amino acid transport systems, ATPase component	E	high-affinity branched-chain amino acid transport ATP-binding protein (braG)
9862	1.50319974286959	2.62644090987349	0.95605889342382	559	Branched-chain amino acid ABC-type transport system, permease components	E	high-affinity branched-chain amino acid transport protein (braD)
9863	1.47476283442186	2.48831511712621	0.909845799468785	4177	ABC-type branched-chain amino acid transport system, permease component	E	high-affinity branched-chain amino acid transport protein (braE)
9864	1.51185321318397	2.47991729871614	0.893440847033515	66	3-isopropylmalate dehydratase small subunit	E	3-isopropylmalate dehydratase (leuD)
9865	1.45058666619512	2.33124378400146	0.820437138947471	720	6-pyruvoyl-tetrahydropterin synthase	H	conserved hypothetical protein
9866	1.35956426812863	2.21368678501233	0.78983298352996	1568	Predicted methyltransferases	R	conserved hypothetical protein
9867	1.438211683797	2.3390378958884	0.851317362851905	1798	Diphthamide biosynthesis methyltransferase	J	diphthine synthase (dph5)
9868	1.62316218083316	2.78564280445171	0.973435712389335	475	Kef-type K+ transport systems, membrane components	P	NA(+)/H(+) antiporter (napA)
9869	1.41176912533454	2.34779841356491	0.839879967995875	129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	EG	dihydroxy-acid dehydratase (ilvD)
9870	1.31522240494709	2.16193210278514	0.806815393353722	66	3-isopropylmalate dehydratase small subunit	E	3-isopropylmalate dehydratase (leuD)
9871	1.40497957790566	2.30959154942451	0.866139761144577	-	-	-	M. jannaschii predicted coding region MJ1278
9872	1.55396491787278	2.55868684802896	0.899907157397978	-	-	-	M. jannaschii predicted coding region MJ1279
9873	1.4732076985836	2.33015019898429	0.83098452320306	-	-	-	M. jannaschii predicted coding region MJ1280
9874	1.44447428490222	2.30322197210547	0.791507114276152	-	-	-	M. jannaschii predicted coding region MJ1281
9875	1.45292882942375	2.41196555701053	0.841920528691356	1800	Predicted transglutaminase-like proteases	R	M. jannaschii predicted coding region MJ1282
9876	1.57891764220624	2.54132168441257	0.891316773022374	1989	Type II secretory pathway, prepilin signal peptidase PulO and related peptidases	NOU	M. jannaschii predicted coding region MJ1282.1
9877	1.45598666227968	2.49447540893442	0.903803945778764	-	-	-	M. jannaschii predicted coding region MJ1282.2
9878	1.48060419023249	2.48967640307656	0.89960437727936	-	-	-	M. jannaschii predicted coding region MJ1283
9879	1.47803246158709	2.45749398340709	0.905436767778678	-	-	-	M. jannaschii predicted coding region MJ1284
9880	1.43909923070165	2.34757267292763	0.873825702039693	-	-	-	M. jannaschii predicted coding region MJ1285
9881	1.63388747258639	2.75097028960873	0.953892678930408	2064	Flp pilus assembly protein TadC	NU	conserved hypothetical protein
9882	1.41553862793165	2.34693991406543	0.860724716883077	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein, putative
9883	1.49274799076167	2.38381501017667	0.830241231744978	630	Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella bios	NU	type II secretion system protein
9884	1.50332343291642	2.53414279684655	0.914708803449006	-	-	-	M. jannaschii predicted coding region MJ1288.1
9885	1.486261849795	2.49434849347416	0.898235128145125	-	-	-	M. jannaschii predicted coding region MJ1289
9886	1.46963197474367	2.49585120549959	0.884246734951764	-	-	-	M. jannaschii predicted coding region MJ1290
9887	1.53787303220754	2.61768492934579	0.911857640347264	-	-	-	M. jannaschii predicted coding region MJ1291
9888	1.48504441138113	2.41386328976454	0.831489635913999	-	-	-	M. jannaschii predicted coding region MJ1292
9889	1.51839347378389	2.4678614338488	0.874540244457866	-	-	-	M. jannaschii predicted coding region MJ1292.1
9890	1.55131432896355	2.55675805317155	0.854329114875563	-	-	-	M. jannaschii predicted coding region MJ1293
9891	1.36212900850523	2.29034962351686	0.826618505109951	1951	Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain	C	tartrate dehydratase, subunit alpha (ttdA)
9892	1.56061206847687	2.5416104573249	0.892887857573447	1387	Histidinol phosphatase and related hydrolases of the PHP family	ER	conserved hypothetical protein
9893	1.52900025787402	2.54719627668664	0.899959062733258	502	Biotin synthase and related enzymes	H	biotin synthetase (bioB)
9894	1.43102484647098	2.34664357735853	0.850368069544049	1424	Pimeloyl-CoA synthetase	H	6-carboxyhexanoate-CoA ligase (bioW)
9895	1.51150712795556	2.47961078098609	0.87149066856988	156	7-keto-8-aminopelargonate synthetase and related enzymes	H	8-amino-7-oxononanoate synthase (bioF)
9896	1.39353610054761	2.2631235475416	0.800408938479177	132	Dethiobiotin synthetase	H	dethiobiotin synthetase (bioD)
9897	1.54721404469116	2.50136240518329	0.895180314723527	161	Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	H	adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA)
9898	1.57769940087723	2.53223246583885	0.866008250382866	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ1301
9899	1.5117155656469	2.51405346090419	0.902779352832146	1143	Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)	C	photosystem I iron-sulfur center 1 isolog
9900	1.46968492653437	2.34756898920989	0.834718234427943	1145	Ferredoxin	C	polyferredoxin (mvhB)
9901	1.49762349181112	2.39767146037534	0.844692249186531	2250	Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN	S	conserved hypothetical protein
9902	1.43792889061167	2.30865391028589	0.868328255467203	1708	Predicted nucleotidyltransferases	R	M. jannaschii predicted coding region MJ1305
9903	1.52194930740483	2.5340512282602	0.975315354558033	-	-	-	conserved hypothetical protein
9904	1.55040961313485	2.62879472458316	0.952129914878727	2111	Multisubunit Na+/H+ antiporter, MnhB subunit	P	conserved hypothetical protein
9905	1.70667369370651	2.81774009436697	0.999582175253284	-	-	-	M. jannaschii predicted coding region MJ1308
9906	1.68832976280233	2.85653692465463	1.01859155472891	651	Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit	CP	carbon monoxide dehydrogenase, hydrogenase anchor subunit CooM (cooM)
9907	1.56636041718938	2.69181530356267	0.975767732745846	1006	Multisubunit Na+/H+ antiporter, MnhC subunit	P	conserved hypothetical protein
9908	1.53148471464828	2.53171958938615	0.910751378465256	1082	Sugar phosphate isomerases/epimerases	G	conserved hypothetical protein
9909	1.34931838652698	2.21203076952678	0.797852551558124	731	Fe-S oxidoreductases	C	conserved hypothetical protein
9910	1.37447438164947	2.29345827445766	0.824446302314678	1679	Uncharacterized conserved protein	S	conserved hypothetical protein
9911	1.51453155014385	2.53107765387803	0.890366940149571	1270	Cobalamin biosynthesis protein CobD/CbiB	H	cobalamin biosynthesis protein B (cbiB)
9912	1.43235705930052	2.35708757848474	0.838668683429015	1341	Predicted GTPase or GTP-binding protein	R	conserved hypothetical protein
9913	1.38451812987141	2.1697109758454	0.883969277302959	1531	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9914	1.51773216662826	2.6331647943425	0.931264694927028	477	Permeases of the major facilitator superfamily	GEPR	hypothetical protein
9915	1.53710125069773	2.5965396467626	0.926372770202029	1750	Archaeal serine proteases	R	conserved hypothetical protein
9916	1.58995597262838	2.77288514955947	0.985041907440606	733	Na+-dependent transporters of the SNF family	R	sodium-dependent transporter
9917	1.33639313753875	2.1234729882229	0.857347782914178	1412	Uncharacterized proteins of PilT N-term./Vapc superfamily	R	conserved hypothetical protein
9918	1.40561911000243	2.24293739436603	0.750256168723939	1431	Uncharacterized protein containing piwi/argonaute domain	J	M. jannaschii predicted coding region MJ1321
9919	1.41299745141635	2.28602393871491	0.802579295799219	419	ATPase involved in DNA repair	L	purine NTPase
9920	1.3658879222929	2.14449730875497	0.773377980115796	420	DNA repair exonuclease	L	DNA repair protein RAD32 (rad32)
9921	1.5281191683854	2.48308610690147	0.874823263982668	1763	Molybdopterin-guanine dinucleotide biosynthesis protein	H	molybdopterin-guanine dinucleotide biosynthesis protein B (mobB)
9922	1.47493078472103	2.3833307277614	0.944329746324952	640	Predicted transcriptional regulators	K	cadmium resistance protein
9923	1.53655717439657	2.49544994337635	0.898022982115167	1163	Predicted GTPase	R	GTP-binding protein, member of GTP1/OBG-family
9924	1.52108619718	2.44355578913123	0.850123061847688	-	-	-	M. jannaschii predicted coding region MJ1327
9925	1.46766707920505	2.38596786917647	0.829541070307513	827	Adenine-specific DNA methylase	L	Adenine-specific DNA methylase
9926	1.52658492820663	2.3886421036296	0.81963940886905	1002	Type II restriction enzyme, methylase subunits	V	modification methylase, type II R/M system
9927	1.47340405724225	2.42708275525338	0.860464164256445	24	Methionine aminopeptidase	J	methionyl aminopeptidase (map)
9928	1.60338525131979	2.59683182628747	0.950512140190191	1267	Phosphatidylglycerophosphatase A and related proteins	I	conserved hypothetical protein
9929	1.51023554641331	2.4437467943914	0.863714704221523	1254	Acylphosphatases	C	M. jannaschii predicted coding region MJ1331
9930	1.4269116805936	2.30616264340937	0.82851663643935	12	Predicted GTPase, probable translation factor	J	GTP-binding protein, member of GTP1/OBG-family
9931	1.44331847277759	2.35263617475969	0.961375157838789	-	-	-	M. jannaschii predicted coding region MJ1333
9932	1.84308067561	3.22426280345174	1.00885504567924	2510	Predicted membrane protein	S	M. jannaschii predicted coding region MJ1333.1
9933	1.46176625820392	2.34563201880512	0.838888994669344	1210	UDP-glucose pyrophosphorylase	M	UDP-glucose pyrophosphorylase (gtaB)
9934	1.44951748064403	2.44145032155957	0.883137406618177	279	Phosphoheptose isomerase	G	phosphoheptose isomerase (gmhA)
9935	1.49132274743849	2.43524794898137	0.900971276079422	2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	M	M. jannaschii predicted coding region MJ1336
9936	1.33435680316637	2.20670483095126	0.823479568144251	63	Predicted sugar kinase	G	M. jannaschii predicted coding region MJ1337
9937	1.50508530774083	2.53422408800825	0.882896845818373	4007	Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase	R	H(2)-dependent methylenetetrahydromethanopterin dehydrogenase related protein
9938	1.42377767667703	2.32039301087329	0.867802702187573	2229	Predicted GTPase	R	protein with ATP/GTP-binding site
9939	1.56505184931082	2.69202637671201	1.02188378551596	2018	Uncharacterized distant relative of homeotic protein bithoraxoid	R	conserved hypothetical protein
9940	1.32217938088329	2.22529651360431	0.803299440913114	-	-	-	conserved hypothetical protein
9941	1.31305545975806	2.10461663041244	0.822283244786192	-	-	-	M. jannaschii predicted coding region MJ1342
9942	1.55350092978986	2.63521074729354	0.947375209720123	4	Ammonia permease	P	ammonium transporter (amt)
9943	1.47464623963571	2.3317173207003	0.935324561912648	347	Nitrogen regulatory protein PII	E	nitrogen regulatory protein P-II (glnB)
9944	1.47672890134411	2.36876041354375	0.784131667697765	457	FOG: TPR repeat	R	O-linked GlnNAc transferase
9945	1.5316937073346	2.47064185250901	0.727314134945917	174	Glutamine synthetase	E	glutamine synthetase (glnA)
9946	1.44927255734106	2.39902627298383	0.879546357177	603	Predicted PP-loop superfamily ATPase	R	ExsB
9947	1.37753345635818	2.1932834261983	0.749620600067525	-	-	-	M. jannaschii predicted coding region MJ1348
9948	1.54004492858869	2.5189274744694	0.899574239823134	1035	Coenzyme F420-reducing hydrogenase, beta subunit	C	coenzyme F420-reducing hydrogenase, beta subunit
9949	1.45047573117634	2.33188161248634	0.855067524101927	70	Glutamate synthase domain 3	E	formylmethanofuran dehydrogenase, subunt C (tungsten)
9950	1.41965402873118	2.37007046119918	0.862272592615815	1145	Ferredoxin	C	glutamate synthase (gltB)
9951	1.39860711430069	2.24762885545184	0.791302425254239	67	Glutamate synthase domain 1	E	conserved hypothetical protein
9952	1.44803807531924	2.36955372135537	0.827730557951756	171	NAD synthase	H	NH(3)-dependent NAD+ synthetase (nadE)
9953	1.46411116298639	2.37746155237966	0.850012142227048	243	Anaerobic dehydrogenases, typically selenocysteine-containing	C	Formate dehydrogenase
9954	1.65528139542237	2.76896927197891	0.932561443007443	-	-	-	M. jannaschii predicted coding region MJ1354
9955	1.4093741319561	2.30925500582968	0.830480629131673	1542	Uncharacterized conserved protein	S	conserved hypothetical protein
9956	1.42226477729183	2.2861973982996	0.870715042271951	-	-	-	M. jannaschii predicted coding region MJ1356
9957	1.57957657157767	2.58033482170935	0.908120338594639	1226	Kef-type K+ transport systems, predicted NAD-binding component	P	potassium channel protein, putative
9958	1.52433779158646	2.51962632200295	0.922098740759208	-	-	-	M. jannaschii predicted coding region MJ1358
9959	1.51995471940268	2.47745102542046	0.892753696564324	467	RecA-superfamily ATPases implicated in signal transduction	T	conserved hypothetical protein
9960	1.57690273016513	2.55839963401852	0.964359589630194	-	-	-	M. jannaschii predicted coding region MJ1360
9961	1.40982977889986	2.27426819274278	0.829509893312115	4071	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9962	1.59320813164453	2.73138395001868	0.952064157657967	650	Formate hydrogenlyase subunit 4	C	NADH ubiquinone oxidoreductase, subunit 1 isolog
9963	1.34665652260098	2.17621636354708	0.835882888723916	3260	Ni,Fe-hydrogenase III small subunit	C	formate hydrogenlyase, subunit 7
9964	1.52906611852995	2.46567596342672	0.828288372329745	585	Uncharacterized conserved protein	S	conserved hypothetical protein
9965	1.49971107144697	2.48801475575166	0.884070192716432	1916	Uncharacterized homolog of PrgY (pheromone shutdown protein)	S	pheromone shutdown protein (traB)
9966	1.39788655108917	2.30017674494884	0.827527766971471	462	Phosphoribosylpyrophosphate synthetase	FE	ribose-phosphate pyrophosphokinase, (prsA)
9967	1.38675085642338	2.26150284557825	0.801227002616812	3839	ABC-type sugar transport systems, ATPase components	G	sulfate transport ATP-binding protein (cysA)
9968	1.6190093739859	2.73869894007924	0.954919489883348	555	ABC-type sulfate transport system, permease component	O	sulfate transport system permease protein (cysT)
9969	1.32075107025743	2.13697315776208	0.80562481106496	-	-	-	M. jannaschii predicted coding region MJ1369
9970	1.39686733454597	2.33648455830348	0.825245472375933	4020	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ1370
9971	1.40824930607943	2.30635602524723	0.840482559863668	4002	Predicted phosphotransacetylase	R	methlytransferase
9972	1.42372954065414	2.25501835273126	0.805007731527585	20	Undecaprenyl pyrophosphate synthase	I	conserved hypothetical protein
9973	1.43957281451123	2.38835318052763	0.844429541674709	-	-	-	M. jannaschii predicted coding region MJ1373
9974	1.61774601422716	2.65735637363132	0.903544527503884	1235	Metal-dependent hydrolases of the beta-lactamase superfamily I	R	conserved hypothetical protein
9975	1.52941862967631	2.65866141642085	0.96331108256557	2244	Membrane protein involved in the export of O-antigen and teichoic acid	R	SpoVB isolog
9976	1.4910862990893	2.36432311742522	0.844851582853463	293	23S rRNA methylase	J	cell division protein FtsJ
9977	1.41451238326478	2.21295239865499	0.801014367336261	8	Glutamyl- and glutaminyl-tRNA synthetases	J	glutamyl-tRNA synthetase (gltX)
9978	1.45089038213508	2.42136443906623	0.85848981311306	458	Carbamoylphosphate synthase large subunit (split gene in MJ)	EF	carbamoyl-phosphate synthase, medium subunit (carB1)
9979	1.48107559190629	2.46124145833623	0.926286736285479	1669	Predicted nucleotidyltransferases	R	conserved hypothetical protein
9980	1.55731096607754	2.48653087853364	0.933768060182146	2361	Uncharacterized conserved protein	S	conserved hypothetical protein
9981	1.49178673513044	2.47637416407852	0.882315495782025	458	Carbamoylphosphate synthase large subunit (split gene in MJ)	EF	carbamoyl-phosphate synthase, large subunit (carB2)
9982	1.36628349409903	2.15473320350558	0.856310853841441	1673	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9983	1.45861277516588	2.37412785880339	0.812200856213608	1099	Predicted metal-dependent hydrolases with the TIM-barrel fold	R	conserved hypothetical protein
9984	1.47673181237694	2.42037977579729	0.874018659717234	778	Nitroreductase	C	NADH oxidase
9985	1.34548900137492	2.15813152420933	0.821764058774017	1303	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9986	1.56408020861805	2.52017009910931	0.96196429590232	-	-	-	M. jannaschii predicted coding region MJ1386
9987	1.3471524193209	2.19601479062951	0.789506515515766	1641	Uncharacterized conserved protein	S	conserved hypothetical protein
9988	1.41811018740653	2.29807100570704	0.838069424412152	499	S-adenosylhomocysteine hydrolase	H	adenosylhomocysteinase (ahcY)
9989	1.46379766225644	2.39313233971942	0.904070575433219	2018	Uncharacterized distant relative of homeotic protein bithoraxoid	R	M. jannaschii predicted coding region MJ1389
9990	1.53540094675444	2.43853979856897	0.880163318602758	-	-	-	DNA-directed RNA polymerase, subunit I (rpoI)
9991	1.41333753054495	2.26236833328666	0.801577054052444	436	Aspartate/tyrosine/aromatic aminotransferase	E	putative aminotransferase
9992	1.382850411358	2.28373194600668	0.820028672853099	119	Isopropylmalate/homocitrate/citramalate synthases	E	2-isopropylmalate synthase (leuA)
9993	1.61208254860273	2.74866217579031	0.967234869781652	-	-	-	conserved hypothetical protein
9994	1.55570808215191	2.57729051105983	0.91943115097592	-	-	-	conserved hypothetical protein
9995	1.55787048736706	2.52757052224722	0.872564888741828	-	-	-	conserved hypothetical protein
9996	1.51985647162393	2.54997379627091	0.914371865876192	-	-	-	M. jannaschii predicted coding region MJ1396
9997	1.51965290482554	2.56924634942123	0.878792621442899	-	-	-	M. jannaschii predicted coding region MJ1397
9998	1.61484739083371	2.63319257264951	0.890432382589823	3398	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
9999	1.34790384123255	2.19853009732325	0.825237801435411	237	Dephospho-CoA kinase	H	alignment in /usr/local/projects/ARG/Intergenic/ARG_R584_orf2.nr
10000	1.39101437355617	2.48558776142588	0.975022412964999	1991	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1400
10001	1.38690655347697	2.2631863280626	0.797471312915983	1202	Superfamily II helicase, archaea-specific	R	putative ATP dependent RNA helicase
10002	1.43972566777569	2.41105164149919	0.814060390807773	-	-	-	M. jannaschii predicted coding region MJ1402
10003	1.53608067065867	2.55201656588057	0.901673494111186	-	-	-	M. jannaschii predicted coding region MJ1403
10004	1.34274551360982	2.16023050649833	0.766865271110804	517	FOG: CBS domain	R	M. jannaschii predicted coding region MJ1404
10005	1.52512535199387	2.37835461222943	0.910774377163754	1254	Acylphosphatases	C	M. jannaschii predicted coding region MJ1405
10006	1.32492200243952	2.14136659878318	0.833672136982115	1781	Aspartate carbamoyltransferase, regulatory subunit	F	aspartate carbamoyltransferase regulatory chain (pyrI)
10007	1.43413125711926	2.39273014970171	0.929495211830036	1786	Uncharacterized conserved protein	S	conserved hypothetical protein
10008	1.46242345685486	2.36249785518356	0.840953137546696	1084	Predicted GTPase	R	GTP-binding protein, member of GTP1/OBG-family
10009	1.40313954325	2.24331900460831	0.792793504480616	-	-	-	M. jannaschii predicted coding region MJ1409
10010	1.40662187388863	2.27328987890486	0.793760036022639	1374	Protein involved in ribosomal biogenesis, contains PUA domain	J	conserved hypothetical protein
10011	1.45362616682434	2.41169970580953	0.835406609400043	1012	NAD-dependent aldehyde dehydrogenases	C	glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent (gapN)
10012	1.42285505440076	2.30421094071852	0.829567786713851	4070	Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family	O	conserved hypothetical protein
10013	1.60875340300421	2.64960246999315	0.930610574900356	393	Uncharacterized conserved protein	S	conserved hypothetical protein
10014	1.39210721438263	2.29319155487368	0.849801427636078	-	-	-	M. jannaschii predicted coding region MJ1414
10015	1.40883561928673	2.26574307036266	0.833041785446132	180	Tryptophanyl-tRNA synthetase	J	tryptophanyl-tRNA synthetase (trpS)
10016	1.39797015275181	2.27384840927664	0.817826756167782	1973	Hydrogenase maturation factor	O	conserved hypothetical protein
10017	1.48357372764672	2.44256326475546	0.873234508598281	1067	Predicted ATP-dependent protease	O	ATP-dependent protease LA, putative (lon)
10018	1.39872936726047	2.31096194594665	0.805886684804071	-	-	-	M. jannaschii predicted coding region MJ1417.1
10019	1.48962246200858	2.42866078471007	0.879226543533108	235	Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases	G	fuculose-1-phosphate aldolase (fucA)
10020	1.4665148525146	2.51056463821707	0.92603326647104	1698	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
10021	1.40823470059072	2.28859859388664	0.818127132986965	449	Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains	M	glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (glmS)
10022	1.45889312653285	2.39274190939847	0.844003286437692	1797	Cobyrinic acid a,c-diamide synthase	H	cobyrinic acid a,c-diamide synthase (cbiA)
10023	1.42424252044576	2.31018303038347	0.827360925558088	470	ATPase involved in DNA replication	L	activator 1 (replication factor C), 35 KD subunit
10024	1.37628843730847	2.23716441513065	0.803326283071675	2710	Nitrogenase molybdenum-iron protein, alpha and beta chains	C	vanadium nitrogenase-associated protein N
10025	1.62057295728521	2.5816373724124	0.891669513193841	1676	tRNA splicing endonuclease	J	tRNA intron endonuclease (endA)
10026	1.33696515842793	2.18867284328149	0.789993705378548	2055	Malate/L-lactate dehydrogenases	C	malate dehydrogenase
10027	1.46451936230988	2.36798292475788	0.881285329557799	517	FOG: CBS domain	R	inosine-5'-monophosphate dehydrogenase, (guaB)
10028	1.38811572136904	2.2818009741494	0.822336097831749	1907	Predicted archaeal sugar kinases	R	M. jannaschii predicted coding region MJ1427
10029	1.56224547999337	2.59507365323338	0.881945837343662	457	FOG: TPR repeat	R	O-linked GlnNAc transferase
10030	1.51739157937	2.48539517051017	0.883623329058829	433	Predicted ATPase	R	conserved hypothetical protein
10031	1.28345469766143	2.04660198907667	0.792953700690815	139	Phosphoribosyl-AMP cyclohydrolase	E	phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (hisIE)
10032	1.41007574139505	2.31142562442697	0.833082513162899	1060	Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes	HR	conserved hypothetical protein
10033	1.33179078082814	2.09326050947711	0.759348561608119	2016	Predicted RNA-binding protein (contains PUA domain)	J	conserved hypothetical protein
10034	1.41663837787586	2.27397607472417	0.854003484748311	-	-	-	conserved hypothetical protein
10035	1.46801526485683	2.34670865546834	0.831901527063844	2231	Uncharacterized protein related to Endonuclease III	L	endonuclease III, putative (nth2)
10036	1.55462129111738	2.39772877351853	0.970875346374767	1923	Uncharacterized host factor I protein	R	M. jannaschii predicted coding region MJ1435
10037	1.44393377312489	2.20938944806415	0.910434333403394	-	-	-	conserved hypothetical protein
10038	1.41129229259084	2.25797999319017	0.832618982892532	1011	Predicted hydrolase (HAD superfamily)	R	L-2-haloalkanoic acid dehalogenase isolog
10039	1.46454077714339	2.44916290596925	0.886088546288349	368	Cobalamin-5-phosphate synthase	H	cobalamin (5'-phosphate) synthase (cobS)
10040	1.53249818466519	2.43995025696573	0.870823177392582	1525	Micrococcal nuclease (thermonuclease) homologs	L	thermonuclease
10041	1.36106513187055	2.27771539954032	0.821068721398666	1685	Archaeal shikimate kinase	EH	conserved hypothetical protein
10042	1.51260890001488	2.43793187118436	0.86617807646844	1429	Cobalamin biosynthesis protein CobN and related Mg-chelatases	H	magnesium chelatase subunit (chlH)
10043	1.36414705087999	2.28553550360949	0.827238026470963	-	-	-	M. jannaschii predicted coding region MJ1442
10044	1.63139570512736	2.75093058021772	0.961420280582024	4818	Predicted membrane protein	S	conserved hypothetical protein
10045	1.44832022241088	2.31776960501613	0.814092691384883	258	5'-3' exonuclease (including N-terminal domain of PolI)	L	DNA repair protein RAD2 (rad2)
10046	1.5150012478622	2.41196875788974	0.877320725269321	4186	Predicted phosphoesterase or phosphohydrolase	R	M. jannaschii predicted coding region MJ1445
10047	1.35726564833604	2.1843511618965	0.759266077740575	543	2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases	HC	cytochrome-c3 hydrogenase, gamma chain
10048	1.41101181540054	2.2850308148178	0.840948538965862	269	3-hexulose-6-phosphate synthase and related proteins	G	D-arabino 3-hexulose 6-phosphate formaldehyde lyase isolog
10049	1.37180717413848	2.16639970390548	0.756921221845348	863	DNA modification methylase	L	modification methylase, type II R/M system
10050	1.30415200075784	2.11921799745236	0.740876873261808	-	-	-	M. jannaschii predicted coding region MJ1449
10051	1.57426362808548	2.56387168654117	0.908813559988537	2303	Choline dehydrogenase and related flavoproteins	E	conserved hypothetical protein
10052	1.4681960379502	2.42503682436203	0.869930049256795	4065	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
10053	1.40796561090603	2.31496064700897	0.856736693433071	4076	Predicted RNA methylase	R	conserved hypothetical protein
10054	1.45093585067145	2.30373833976562	0.868737235659417	2457	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1453
10055	1.42977877052451	2.37273123894021	0.855305687007497	710	3-dehydroquinate dehydratase	E	3-dehydroquinate dehydratase (aroD)
10056	1.48131728201044	2.43376972763664	0.862674694501966	648	Endonuclease IV	L	M. jannaschii predicted coding region MJ1455
10057	1.32896796827296	2.21475419162323	0.785873715939968	141	Histidinol dehydrogenase	E	histidinol dehydrogenase (hisD)
10058	1.42557724537471	2.39007775973796	0.889442516971364	-	-	-	M. jannaschii predicted coding region MJ1457
10059	1.62400292560729	2.74093814738846	0.951630529353938	1707	ACT domain-containing protein	R	conserved hypothetical protein
10060	1.447411250797	2.36325676930056	0.845691016917149	1001	Adenine deaminase	F	adenine deaminase (adeC)
10061	1.3619221144199	2.19815761673539	0.807789730336837	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	M. jannaschii predicted coding region MJ1460
10062	1.42778462863153	2.25404362605474	0.80446710633467	-	-	-	M. jannaschii predicted coding region MJ1461
10063	1.41930317804054	2.32000997683869	0.971701462402571	-	-	-	M. jannaschii predicted coding region MJ1462
10064	1.40435228279104	2.27281006603594	0.840164922497349	1851	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1463
10065	1.4233011859284	2.26808878549335	0.824935224555356	1161	Predicted GTPases	R	hypothetical GTP-binding protein (SP:P40010)
10066	1.397671828693	2.31882804444833	0.84446471191328	498	Threonine synthase	E	threonine synthase (thrC)
10067	2.08722711401527	3.39609191793663	0.96390043509511	3316	Transposase and inactivated derivatives	L	transposase, similar to IS240
10068	1.55452297471913	2.58590636035652	0.890460671356581	-	-	-	M. jannaschii predicted coding region MJ1467
10069	1.4916087173306	2.44870074477157	0.860723919569856	3291	FOG: PKD repeat	R	surface antigen
10070	1.58524095254593	2.80217068536214	0.995355490186436	1991	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1469
10071	1.46094289066422	2.4612014432829	0.894205333845582	-	-	-	M. jannaschii predicted coding region MJ1469.1
10072	1.47389575238798	2.37964072439769	0.834682346121509	5306	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1470
10073	1.5835121398618	2.59355118130076	0.894317974454902	-	-	-	M. jannaschii predicted coding region MJ1471
10074	1.52334647193073	2.48913025387124	0.843586086396371	5306	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1472
10075	1.45473989229558	2.35728585203249	0.845370792487606	620	Methionine synthase II (cobalamin-independent)	E	5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (metE)
10076	1.38543051811637	2.25128242659252	0.829198688371019	1439	Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module	R	ribosomal protein S15A isolog
10077	1.36596179513487	2.23191835781468	0.871172797419597	1710	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ1475
10078	1.41937111906382	2.32077639344857	0.851848558098245	565	rRNA methylase	J	conserved hypothetical protein
10079	1.37986484905572	2.22954594001805	0.807809282320089	2342	Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase	G	M. jannaschii predicted coding region MJ1477
10080	1.43685238049529	2.2936221016954	0.805731572432241	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	conserved hypothetical protein
10081	1.52574965071902	2.48210300347739	0.875612334501923	436	Aspartate/tyrosine/aromatic aminotransferase	E	putative aminotransferase
10082	1.34209496515382	2.07279902191015	0.826270321698072	2983	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1479.1
10083	1.47287729855375	2.40740947738008	0.863991115086929	1915	Uncharacterized conserved protein	S	conserved hypothetical protein
10084	1.43307515307015	2.27216495948099	0.817137583333002	4024	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
10085	1.53533829925921	2.54999603013352	0.917278964457762	2074	2-phosphoglycerate kinase	G	2-phosphoglycerate kinase (2pgk)
10086	1.5196878638529	2.52230720010202	0.891545388955449	-	-	-	M. jannaschii predicted coding region MJ1483
10087	1.48014827781741	2.39865001778945	0.834506354361664	-	-	-	M. jannaschii predicted coding region MJ1484
10088	1.47332045635059	2.54700141157549	0.917300636832353	168	Trk-type K+ transport systems, membrane components	P	TRK system potassium uptake protein (trkG)
10089	1.3552932423945	2.25911089800929	0.812720239563696	27	Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)	F	phosphoribosylglycinamide formyltransferase 2 (purT)
10090	1.42961672706347	2.26864427076347	0.765364218398262	1032	Fe-S oxidoreductase	C	conserved hypothetical protein
10091	1.41059907668249	2.31687059729222	0.83846922220102	1233	Phytoene dehydrogenase and related proteins	Q	M. jannaschii predicted coding region MJ1488
10092	1.45065412828332	2.36140455799525	0.853029104596307	1241	Predicted ATPase involved in replication control, Cdc46/Mcm family	L	cell division control protein 47 (cdc47)
10093	1.59715512187331	2.64459968647644	0.905064385989829	-	-	-	M. jannaschii predicted coding region MJ1489.1
10094	1.4152912480359	2.28060742626576	0.799292434278005	44	Dihydroorotase and related cyclic amidohydrolases	F	dihydroorotase (pyrC)
10095	1.65542300324596	2.86903666883234	1.03972977555532	-	-	-	M. jannaschii predicted coding region MJ1491
10096	1.44569621631142	2.35954944911912	0.839296736202437	3815	Predicted membrane protein	S	conserved hypothetical protein
10097	1.34714772947579	2.10267287656394	0.742643476355677	-	-	-	M. jannaschii predicted coding region MJ1493
10098	1.53488612698547	2.53020402801243	0.900916732252918	1223	Predicted ATPase (AAA+ superfamily)	R	AAA superfamily ATPase, similar to FtsH
10099	1.40894407561188	2.34307348922536	0.848563922392136	616	Periplasmic serine proteases (ClpP class)	OU	conserved hypothetical protein
10100	1.38496225486927	2.15977152944764	0.809426544149736	1430	Uncharacterized conserved protein	S	conserved hypothetical protein
10101	1.41890382768906	2.32900854797322	0.831955178325257	624	Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases	E	acetylornithine deacetylase (argE)
10102	1.41945405765391	2.2538088731735	0.803154816215538	863	DNA modification methylase	L	modification methylase, type II R/M system
10103	1.53231211164906	2.5097489203861	0.845994398694435	-	-	-	M. jannaschii predicted coding region MJ1499
10104	1.37572387229382	2.2346805033482	0.799153862890056	-	-	-	M. jannaschii predicted coding region MJ1500
10105	1.3770347434216	2.29828576359159	0.867041675094836	2085	Predicted dinucleotide-binding enzymes	R	conserved hypothetical protein
10106	1.42596331006193	2.32779428597808	0.805610697069578	1234	Metal-dependent hydrolases of the beta-lactamase superfamily III	R	conserved hypothetical protein
10107	1.37742972108638	2.21089479286966	0.857457216175364	3355	Predicted transcriptional regulator	K	conserved hypothetical protein
10108	1.45806739119752	2.37911375368524	0.839380810762681	381	UDP-N-acetylglucosamine 2-epimerase	M	lipopolysaccharide biosynthesis protein (wbpI)
10109	1.39773673949632	2.30348276458223	0.816225612233631	1948	ERCC4-type nuclease	L	ATP dependent RNA helicase, putative
10110	1.42922208869834	2.32613088890427	0.828811830487751	1361	S-layer domain	M	M. jannaschii predicted coding region MJ1506
10111	1.43380767123505	2.39887995803025	0.866300053934473	577	ABC-type antimicrobial peptide transport system, permease component	V	hypothetical protein
10112	1.43339149441628	2.40141139348256	0.881141356437147	1136	ABC-type antimicrobial peptide transport system, ATPase component	V	ABC transporter, probable ATP-binding subunit
10113	1.40574770778246	2.27252000683937	0.883710896532818	-	-	-	M. jannaschii predicted coding region MJ1509
10114	1.52437915499539	2.52075510181496	0.915779295497248	1590	Uncharacterized conserved protein	S	conserved hypothetical protein
10115	1.43424672190553	2.33200926410664	0.887797440177742	599	Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit	S	conserved hypothetical protein
10116	1.49245576942517	2.41880958845324	0.865679460289425	1110	Reverse gyrase	L	reverse gyrase, intein containing (rgy)
10117	1.4847354564624	2.43765455667338	0.860522082850519	-	-	-	M. jannaschii predicted coding region MJ1513
10118	1.56934623743196	2.49522790757218	0.861876771019899	2105	Uncharacterized conserved protein	S	conserved hypothetical protein
10119	1.54110881002032	2.47912846800707	0.852501900432581	121	Predicted glutamine amidotransferase	R	conserved hypothetical protein
10120	1.84301905226752	3.06285147186344	0.9778352182424	2314	Predicted membrane protein	S	M. jannaschii predicted coding region MJ1516
10121	1.90547895519255	3.30865309177765	1.06203043320524	-	-	-	M. jannaschii predicted coding region MJ1516.1
10122	1.55263642858639	2.43765354497544	0.829080605902569	-	-	-	M. jannaschii predicted coding region MJ1517
10123	1.55105287437374	2.50969773200197	0.885564116047629	-	-	-	M. jannaschii predicted coding region MJ1518
10124	1.37020903080468	2.20421731345086	0.749586923919587	507	ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member	L	exodeoxyribonuclease V (recD)
10125	1.44679519637892	2.3421634476673	0.832484124393857	644	Dehydrogenases (flavoproteins)	C	bacteriochlorophyll synthase 43 kDa subunit (chlP)
10126	1.63994628448871	2.83160998235342	1.00537735737801	25	NhaP-type Na+/H+ and K+/H+ antiporters	P	Na+/H+ antiporter
10127	1.28463307083063	2.14849817701269	0.779376302172994	2241	Precorrin-6B methylase 1	H	cobalamin biosynthesis precorrin-6Y methylase (cbiE)
10128	1.43132102237606	2.37297706035804	0.905657111255745	239	Integral membrane protein possibly involved in chromosome condensation	D	conserved hypothetical protein
10129	1.48262577340555	2.38502435772027	0.899453571600368	1993	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1524
10130	1.54446038197098	2.60845886796998	0.935863748946025	1287	Uncharacterized membrane protein, required for N-linked glycosylation	R	putative transmembrane oligosaccharyl transferase
10131	1.46615283184184	2.44574444571483	0.872077518872413	2122	Uncharacterized conserved protein	S	conserved hypothetical protein
10132	1.57465625267116	2.62040183607895	0.946454618695016	4818	Predicted membrane protein	S	conserved hypothetical protein
10133	1.39522318232771	2.35794338418349	0.878700974985325	149	Triosephosphate isomerase	G	triosephosphate isomerase
10134	1.36258347335071	2.17627725921026	0.806204696156649	350	Methylated DNA-protein cysteine methyltransferase	L	methylated-DNA-protein-cysteine methyltransferase, putative (ogt)
10135	1.59732552793861	2.58719666052196	0.918549507151931	456	Acetyltransferases	R	ribosomal protein S18 alanine acetyltransferase
10136	1.39035657010788	2.26159182748636	0.770601408903643	732	Restriction endonuclease S subunits	V	type I restriction-modification enzyme, S subunit, putative
10137	1.37593583890819	2.22016594998002	0.832032125787146	106	Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase	E	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA1)
10138	1.45375941059251	2.36653327894265	0.851357925589419	1855	ATPase (PilT family)	R	conserved hypothetical protein
10139	1.38211747764903	2.30704839385566	0.747711837961423	2141	Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-depend	C	N5,N10-methylene-tetrahydromethanopterin reductase (mer)
10140	1.39570970315517	2.24716246381687	0.747470865119868	-	-	-	M. jannaschii predicted coding region MJ1535
10141	1.38282924820552	2.28876785060938	0.841704184460479	492	Thioredoxin reductase	O	thioredoxin reductase (trxB)
10142	1.44577154290894	2.3453557615543	0.851198283176584	-	-	-	M. jannaschii predicted coding region MJ1537
10143	1.40810936193637	2.26896893164029	0.769181222673619	4088	Predicted nucleotide kinase	F	Yeast KTI12 Protein
10144	1.36832666386938	2.2647465290505	0.854600456089507	-	-	-	M. jannaschii predicted coding region MJ1539
10145	1.3382807463423	2.26509454145735	0.87251179708384	-	-	-	M. jannaschii predicted coding region MJ1540
10146	1.50091744589299	2.45326309861186	0.85877625389536	402	Cytosine deaminase and related metal-dependent hydrolases	FR	N-ethylammeline chlorohydrolase (trzA)
10147	1.52099866248168	2.46671859665528	0.866989372666008	-	-	-	M. jannaschii predicted coding region MJ1542
10148	1.34580413289925	2.20685651056622	0.795543112890005	59	Ketol-acid reductoisomerase	EH	ketol-acid reductoisomerase (ilvC)
10149	1.49769052529372	2.42661238669788	0.882817031669995	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein
10150	1.39170387239781	2.30937392991872	0.85766896091563	1709	Predicted transcriptional regulator	K	conserved hypothetical protein
10151	1.50944547857939	2.49174038509251	0.898370617453826	3425	3-hydroxy-3-methylglutaryl CoA synthase	I	putative beta-ketoacyl acyl-carrier-protein synthase (fabH)
10152	1.54317269036321	2.44427508905728	0.931734230652221	1708	Predicted nucleotidyltransferases	R	conserved hypothetical protein
10153	1.74064489066106	2.75438236587928	0.892631733096255	2445	Uncharacterized conserved protein	S	conserved hypothetical protein
10154	1.5185711057365	2.59479015960505	0.929839165862244	183	Acetyl-CoA acetyltransferase	I	3-keto-acyl-CoA thiolase
10155	1.72802262059151	2.74995978904353	0.983814163954551	-	-	-	M. jannaschii predicted coding region MJ1550
10156	1.3039128783128	2.05201238169481	0.874857172849428	1532	Predicted RNA-binding protein	R	conserved hypothetical protein
10157	1.333461657547	2.10259788102241	0.842846745253161	1545	Predicted nucleic-acid-binding protein containing a Zn-ribbon	R	conserved hypothetical protein
10158	1.46280560897674	2.47534940662913	0.898462644994912	640	Predicted transcriptional regulators	K	transcriptional regulatory protein, arsR family
10159	1.51235518762847	2.46457102156318	0.880266993287753	4880	Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats	R	conserved hypothetical protein
10160	1.37623319787337	2.22265803829175	0.80653523274254	17	Aspartyl/asparaginyl-tRNA synthetases	J	aspartyl-tRNA synthetase (aspS)
10161	1.53475089051231	2.59627129201772	0.910861589926971	3366	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
10162	1.43819790932775	2.27597310127131	0.819107789582831	2520	Predicted methyltransferase	R	met-10+ related protein
10163	1.52906425803954	2.57136265380353	0.974227650071646	3830	ACT domain-containing protein	T	M. jannaschii predicted coding region MJ1558
10164	1.37436717165718	2.21961923956467	0.795312336120523	1618	Predicted nucleotide kinase	F	conserved hypothetical protein
10165	1.49146061880837	2.59792042396531	0.923561931560411	477	Permeases of the major facilitator superfamily	GEPR	multidrug-efflux transporter (bmr1)
10166	1.48769583192323	2.46371279785518	0.884704112510988	1361	S-layer domain	M	M. jannaschii predicted coding region MJ1561
10167	1.71317497830877	2.83966478818498	0.994035031399995	1033	Predicted exporters of the RND superfamily	R	M. jannaschii predicted coding region MJ1562
10168	1.44279220794133	2.41409282730703	0.900707231039876	1510	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ1563
10169	1.36495256716158	2.23996285753268	0.854928471718608	1931	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ1564
10170	1.43320571599673	2.32106435253608	0.821726802530619	433	Predicted ATPase	R	conserved hypothetical protein
10171	1.43916342053396	2.39982964269402	0.875055857232338	-	-	-	M. jannaschii predicted coding region MJ1566
10172	1.4252952456859	2.33126835627193	0.857396807662314	-	-	-	M. jannaschii predicted coding region MJ1567
10173	1.39179344602659	2.21979882522536	0.842224412660053	1514	2'-5' RNA ligase	J	conserved hypothetical protein
10174	1.56542377595018	2.58556754162309	0.902742478910153	310	ABC-type Co2+ transport system, permease component	P	cobalamin biosynthesis protein (cbiM)
10175	1.65562000886672	2.71659746369186	0.960009223356659	310	ABC-type Co2+ transport system, permease component	P	M. jannaschii predicted coding region MJ1570
10176	1.54397820371296	2.59179595064864	0.896019820884756	619	ABC-type cobalt transport system, permease component CbiQ and related transporters	P	cobalt transport protein (cbiQ)
10177	1.44698624324827	2.32046728319094	0.845153036970608	1122	ABC-type cobalt transport system, ATPase component	P	cobalt transport ATP-binding protein (cbiO)
10178	1.77650375286372	2.90835828714065	0.997269968480575	1205	Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	R	M. jannaschii predicted coding region MJ1572.1
10179	1.45170835764872	2.35101085142724	1.03933958674811	-	-	-	M. jannaschii predicted coding region MJ1573
10180	1.603416749286	2.54292201227765	0.884367101856592	1205	Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster	R	ATP-dependent RNA helicase, eIF-4A family, putative
10181	1.37537766320674	2.24400205219946	0.840393498601669	518	GMP synthase - Glutamine amidotransferase domain	F	GMP synthase (guaA)
10182	1.49317708915151	2.50618954205453	0.911566681046976	1704	Uncharacterized conserved protein	S	LemA protein
10183	1.60905110903546	2.62544871931848	0.897379376207293	4907	Predicted membrane protein	S	M. jannaschii predicted coding region MJ1577
10184	1.46437345300973	2.42294564720173	0.892350309877724	2875	Precorrin-4 methylase	H	cobalamin biosynthesis precorrin-3 methylase (cbiF)
10185	1.499880991654	2.42707881927273	0.99316611559981	-	-	-	M. jannaschii predicted coding region MJ1579
10186	1.59402049680278	2.57565679310883	0.937861713638966	2456	Uncharacterized conserved protein	S	conserved hypothetical protein
10187	1.42895103871807	2.33633202852672	0.828793571454098	540	Aspartate carbamoyltransferase, catalytic chain	F	aspartate carbamoyltransferase catalytic chain (pyrB)
10188	1.4950969493055	2.40920664472038	0.877434689828068	84	Mg-dependent DNase	L	conserved hypothetical protein
10189	1.57487412804535	2.46351950301624	0.900554260583848	1720	Uncharacterized conserved protein	S	conserved hypothetical protein
10190	1.44753304843029	2.41355098827976	0.813199644382317	-	-	-	M. jannaschii predicted coding region MJ1584
10191	1.51254403430069	2.46789081635443	0.884855915020747	1830	DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes	G	conserved hypothetical protein
10192	1.425143900552	2.30985947601629	0.825958643626875	63	Predicted sugar kinase	G	conserved hypothetical protein
10193	1.57038731458048	2.55563817296514	0.889979095252993	613	Predicted metal-dependent phosphoesterases (PHP family)	R	M. jannaschii predicted coding region MJ1587
10194	1.4492863880593	2.37589037058905	0.886487114749957	-	-	-	conserved hypothetical protein
10195	1.50615820289118	2.55477239749296	0.896141821344179	3366	Uncharacterized protein conserved in archaea	S	M. jannaschii predicted coding region MJ1589
10196	1.47796510771229	2.47900173469543	0.947305845399554	-	-	-	M. jannaschii predicted coding region MJ1590
10197	1.45489934857173	2.4068667287943	0.840269312039872	709	Selenophosphate synthase	E	selenophosphate synthetase, selenocysteine-containing
10198	1.40335567069832	2.2456506392863	0.815171709796174	152	Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase	F	phosphoribosylaminoimidazolesuccinocarboxamide synthase (purC)
10199	1.30284159842426	2.07734469974976	0.886628086094719	1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component	F	conserved hypothetical protein
10200	1.24641875695921	2.03848119771007	0.746667903647857	560	Phosphoserine phosphatase	E	phosphoserine phosphatase (serB)
10201	1.60536826424579	2.7468315844265	0.940897344099629	392	Predicted integral membrane protein	S	conserved hypothetical protein
10202	1.33848148188038	2.19539776686058	0.788557173142114	473	Isocitrate/isopropylmalate dehydrogenase	CE	3-isopropylmalate dehydrogenase 2 (leuB2)
10203	1.37258924208421	2.26724889208855	0.802558196229775	112	Glycine/serine hydroxymethyltransferase	E	serine hydroxymethyltransferase (glyA)
10204	1.91086744254767	3.05088328817014	0.926315768111839	-	-	-	M. jannaschii predicted coding region MJ1597.1
10205	1.43920472475671	2.40754426184165	0.844397667413379	2038	NaMN:DMB phosphoribosyltransferase	H	conserved hypothetical protein
10206	1.35499929851185	2.15804770784795	0.79257755008218	37	Predicted ATPase of the PP-loop superfamily implicated in cell cycle control	D	M. jannaschii predicted coding region MJ1599
10207	1.5240835696229	2.48281440832111	0.911991098784734	575	CDP-diglyceride synthetase	I	conserved hypothetical protein
10208	1.35464585062867	2.17231939913069	0.834888622285766	2061	ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase	E	conserved hypothetical protein
10209	1.319805756621	2.20837073754625	0.803400298055737	460	Homoserine dehydrogenase	E	homoserine dehydrogenase (hom)
10210	1.43272110200448	2.32103178505589	0.838696904827286	120	Ribose 5-phosphate isomerase	G	ribose 5-phosphate isomerase
10211	1.42022411083521	2.3050920733708	0.822079397435543	4809	Archaeal ADP-dependent phosphofructokinase/glucokinase	G	M. jannaschii predicted coding region MJ1604
10212	1.43087062992899	2.35625972845245	0.853996720769607	166	Glucose-6-phosphate isomerase	G	glucose-6-phosphate isomerase
10213	1.55387828343532	2.49479393899057	0.887590626418909	297	Glycogen synthase	G	glycogen synthase (glgA)
10214	1.54956270305738	2.51521216499893	0.874846734805463	438	Glycosyltransferase	M	LPS biosynthesis protein, putative
10215	1.68165595133251	2.77517884565964	1.01582405024496	-	-	-	M. jannaschii predicted coding region MJ1608
10216	1.40688298868659	2.25842385038124	0.780004693444998	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ1609
10217	1.56251749594657	2.53090380131067	0.892141040168329	3387	Glucoamylase and related glycosyl hydrolases	G	glucoamylase (cga)
10218	1.47837858840666	2.37145327372	0.816799980894365	1449	Alpha-amylase/alpha-mannosidase	G	alpha-amylase (amyA)
10219	1.49389578589797	2.4183839131628	0.847723125991627	3635	Predicted phosphoglycerate mutase, AP superfamily	G	phosphonopyruvate decarboxylase (bcpC)
10220	1.41191338595707	2.31426128071726	0.864147862967763	1865	Uncharacterized conserved protein	S	conserved hypothetical protein
10221	1.40167707115991	2.26570194593242	0.80335565282932	1082	Sugar phosphate isomerases/epimerases	G	conserved hypothetical protein
10222	1.75954745184677	2.86762571572174	0.896477205419539	2469	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1615
10223	1.47221289153259	2.42624223594874	0.879288420202294	516	IMP dehydrogenase/GMP reductase	F	inosine-5'-monophosphate dehydrogenase, (guaB)
10224	1.42866543423934	2.50623144152969	0.94751171718971	2034	Predicted membrane protein	S	M. jannaschii predicted coding region MJ1617
10225	1.46192059266432	2.40642382794003	0.863011799470076	662	Mannose-6-phosphate isomerase	G	conserved hypothetical protein
10226	1.50934481807519	2.46082051561809	0.867908904999451	340	Biotin-(acetyl-CoA carboxylase) ligase	H	biotin operon repressor/biotin--[acetyl-CoA-carboxylase] ligase (birA)
10227	1.40901094094786	2.28195913704494	0.805835123348418	1032	Fe-S oxidoreductase	C	conserved hypothetical protein
10228	1.52469199743431	2.61101308625896	1.01925071090627	-	-	-	M. jannaschii predicted coding region MJ1621
10229	2.09164748040602	3.48545024894177	1.07905919108659	-	-	-	IS-like element
10230	1.47708285782449	2.36422084243931	0.834595866444589	1378	Predicted transcriptional regulators	K	M. jannaschii predicted coding region MJ1623
10231	1.47406624013357	2.39368230430603	0.928540599893491	1658	Small primase-like proteins (Toprim domain)	L	conserved hypothetical protein
10232	1.45282648668875	2.39095253083888	0.843368477961198	-	-	-	M. jannaschii predicted coding region MJ1626
10233	1.4303372139194	2.29554528717802	0.822458350515568	1293	Predicted RNA-binding protein homologous to eukaryotic snRNP	K	conserved hypothetical protein
10234	1.39565534680823	2.2860815448531	0.850934016372704	1860	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
10235	1.54419711459458	2.52237738665828	0.860220280739236	3044	Predicted ATPase of the ABC class	R	M. jannaschii predicted coding region MJ1628
10236	1.48308930655	2.35306454107417	0.851255578741601	2248	Predicted hydrolase (metallo-beta-lactamase superfamily)	R	conserved hypothetical protein
10237	1.45231632723506	2.32458115943376	0.834278457828102	1933	Archaeal DNA polymerase II, large subunit	L	conserved hypothetical protein
10238	1.48145966603087	2.36678233393271	0.835990886985193	58	Glucan phosphorylase	G	glycogen phosphorylase (glgP)
10239	1.45847547849466	2.37498317502509	0.846921842722283	2896	Molybdenum cofactor biosynthesis enzyme	H	coenzyme PQQ synthesis protein (pqqE)
10240	1.44314541699565	2.40573042776637	0.874021036609046	618	Exopolyphosphatase-related proteins	R	conserved hypothetical protein
10241	1.41387750474976	2.26541379385989	0.830994558072954	1634	Uncharacterized Rossmann fold enzyme	R	conserved hypothetical protein
10242	1.72100073323286	2.75594230852788	0.923109193802071	675	Transposase and inactivated derivatives	L	M. jannaschii predicted coding region MJ1635
10243	1.48428998633847	2.45822683672108	0.87085821544803	3252	Methenyltetrahydromethanopterin cyclohydrolase	H	N5,N10-methenyl-tetrahydromethanopterin cyclohydrolase (mch)
10244	1.61855080518046	2.62086148271883	0.918854780319968	1373	Predicted ATPase (AAA+ superfamily)	R	conserved hypothetical protein
10245	1.40276122940671	2.28879741322287	0.788899297158571	1365	Predicted ATPase (PP-loop superfamily)	R	conserved hypothetical protein
10246	1.59888893837761	2.57743065020101	0.891037878282091	-	-	-	M. jannaschii predicted coding region MJ1639
10247	1.41944709361768	2.27533085694062	0.834446159306033	1901	Uncharacterized conserved protein	S	conserved hypothetical protein
10248	1.57827125147191	2.54931927430139	0.89973267856497	704	Phosphate uptake regulator	P	repressor protein
10249	1.41775529374293	2.2501731561517	0.815862925978151	1719	Predicted hydrocarbon binding protein (contains V4R domain)	R	conserved hypothetical protein
10250	1.52056067384205	2.49247438172664	0.878651318889445	1196	Chromosome segregation ATPases	D	chromosome segretation protein (smc1)
10251	1.52617022736487	2.59781179466108	0.931118343899848	2245	Predicted membrane protein	S	M. jannaschii predicted coding region MJ1644
10252	1.43165357949788	2.32109445392111	0.819559897071595	602	Organic radical activating enzymes	O	coenzyme PQQ synthesis protein III isolog (Haemophilus influenzae}
10253	1.48336309205217	2.55141118266227	0.923522533877381	856	Orotate phosphoribosyltransferase homologs	F	pyrimidine biosynthesis protein, putative
10254	1.40010273872866	2.31483724277679	0.932593115589319	2036	Histones H3 and H4	B	DNA binding protein
10255	1.37070415849234	2.21743029472671	0.819668022600172	47	Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain	F	phosphoribosylformylglycinamidine synthase I, (purQ)
10256	1.39581269199674	2.23141576651514	0.799204660884589	1092	Predicted SAM-dependent methyltransferases	R	conserved hypothetical protein)
10257	1.41456142907515	2.26915137423244	0.817137184436421	1499	NMD protein affecting ribosome stability and mRNA decay	J	conserved hypothetical protein
10258	1.42823704954271	2.31716232232656	0.841184892195734	1912	Uncharacterized conserved protein	S	conserved hypothetical protein
10259	1.43387546855086	2.30233877570098	0.822749113888243	551	Zn-finger domain associated with topoisomerase type I	L	DNA topoisomerase I (topA) {Bacillus subtilis
10260	1.39759397851802	2.26549280443409	0.818879489540219	1092	Predicted SAM-dependent methyltransferases	R	conserved hypothetical protein
10261	1.52300362859914	2.44278464107427	0.888730421108777	-	-	-	M. jannaschii predicted coding region MJ1654
10262	1.46000131598931	2.40367615126553	0.909055269172268	503	Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins	F	adenine phosphoribosyltransferase (apt)
10263	1.40621321072195	2.29267912414335	0.846087204288714	179	2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)	Q	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE)
10264	1.65209975482876	2.67576616105395	0.92302709700852	826	Collagenase and related proteases	O	M. jannaschii predicted coding region MJ1657
10265	1.49633075399851	2.38606599216337	0.876535502996167	-	-	-	M. jannaschii predicted coding region MJ1658
10266	1.48703986100527	2.36454417807876	0.829139394943088	1672	Predicted ATPase (AAA+ superfamily)	R	M. jannaschii predicted coding region MJ1659
10267	1.45524501573463	2.32324675731096	0.831156795792132	2024	Phenylalanyl-tRNA synthetase alpha subunit (archaeal type)	J	phenylalanyl-tRNA synthase alpha subunit
10268	1.36422760325109	2.21932377896025	0.845082942751118	311	Predicted glutamine amidotransferase involved in pyridoxine biosynthesis	H	conserved hypothetical protein
10269	1.47255275858838	2.40316594059185	0.858965229042401	1123	ATPase components of various ABC-type transport systems, contain duplicated ATPase	R	methyl coenzyme M reductase system, component A2-like
10270	1.57172203391772	2.5898336168505	0.885342321740291	746	Molybdopterin-guanine dinucleotide biosynthesis protein A	H	molybdopterin-guanine dinucleotide biosynthesis protein A (mobA)
10271	1.50463568925475	2.39974546913577	0.840703597713111	-	-	-	conserved hypothetical protein
10272	1.42967581144942	2.41465066299832	0.86630666255543	2848	Uncharacterized conserved protein	S	M. jannaschii predicted coding region MJ1665
10273	1.42265293012126	2.32638410684968	0.817283010195354	1517	Uncharacterized protein predicted to be involved in DNA repair	L	M. jannaschii predicted coding region MJ1666
10274	1.4114164589671	2.28164549752478	0.797508441315421	1332	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	M. jannaschii predicted coding region MJ1667
10275	1.41039189142023	2.27749207457832	0.827823730623473	1567	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	conserved hypothetical protein
10276	1.38428501792926	2.22903372925751	0.834362864726829	1337	Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)	L	conserved hypothetical protein
10277	1.43643761618315	2.3220551332562	0.879257196715551	1421	Uncharacterized protein predicted to be involved in DNA repair	L	M. jannaschii predicted coding region MJ1670
10278	1.48163077665833	2.35328302176014	1.02391317725768	-	-	-	M. jannaschii predicted coding region MJ1671
10279	1.41997484086926	2.28595128572998	0.804442531686472	1353	Predicted hydrolase of the HD superfamily (permuted catalytic motifs)	R	conserved hypothetical protein
10280	1.40719631196556	2.1799298291896	0.794010960511984	-	-	-	M. jannaschii predicted coding region MJ1673
10281	1.45504286109869	2.34602905849033	0.825034893648118	-	-	-	M. jannaschii predicted coding region MJ1674
10282	1.55385062574864	2.49166854715405	0.882093675476813	101	Pseudouridylate synthase	J	pseudouridylate synthase I (truA)
10283	1.50211435591806	2.47720669403657	0.873590413524842	4053	Uncharacterized protein conserved in archaea	S	conserved hypothetical protein
10284	1.53825407867819	2.6642171047504	0.980538365464577	2095	Multiple antibiotic transporter	U	conserved hypothetical protein
10285	1.44902863807173	2.32591183839508	0.840830946386894	1103	Archaea-specific pyridoxal phosphate-dependent enzymes	R	acetyltransferase
10286	1.33286088548772	2.20293399274723	0.874735038681605	3609	Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain	K	M. jannaschii predicted coding region MJ1679
10287	1.38876196533722	2.29710385237728	0.77407780739777	1569	Predicted nucleic acid-binding protein, contains PIN domain	R	conserved hypothetical protein
10288	1.45389912866534	2.3567651865358	0.834697445581418	1146	Ferredoxin	C	conserved hypothetical protein
10289	1.48571310039085	2.50900944879293	0.906714413774347	501	Zn-dependent protease with chaperone function	O	heat shock protein HtpX, possibly protease (htpX)