TaxId1	Genome1	TaxId2	Genome2	nTot1	nTot2	nBoth	nOne	nNeither	nAdj	nSameB	nSameO	nSameN	nSameA	nConvB	nConvO	nConvN	nConvA	nDivB	nDivO	nDivN	nDivA
203267	Tropheryma whipplei str. Twist	100226	Streptomyces coelicolor A3(2)	808	7512	218	340	250	125	181	253	174	114	20	45	35	6	17	42	41	5
203267	Tropheryma whipplei str. Twist	103690	Nostoc sp. PCC 7120	808	5366	133	320	355	31	109	241	258	31	8	49	43	0	16	30	54	0
203267	Tropheryma whipplei str. Twist	107806	Buchnera aphidicola str. APS (Acyrthosiphon pisum)	808	564	67	234	507	37	64	176	368	37	1	32	67	0	2	26	72	0
203267	Tropheryma whipplei str. Twist	111955	Sulfolobus tokodaii	808	2826	23	168	617	9	15	121	472	6	1	27	72	0	7	20	73	3
203267	Tropheryma whipplei str. Twist	1148	Synechocystis sp. PCC 6803	808	3167	121	310	377	28	102	229	277	28	7	45	48	0	12	36	52	0
203267	Tropheryma whipplei str. Twist	115711	Chlamydophila pneumoniae AR39	808	1112	62	236	510	31	58	183	367	31	1	28	71	0	3	25	72	0
203267	Tropheryma whipplei str. Twist	115713	Chlamydophila pneumoniae CWL029	808	1054	62	236	510	31	58	183	367	31	1	27	72	0	3	26	71	0
203267	Tropheryma whipplei str. Twist	119072	Thermoanaerobacter tengcongensis	808	2588	127	312	369	72	110	238	260	70	7	40	53	1	10	34	56	1
203267	Tropheryma whipplei str. Twist	122586	Neisseria meningitidis MC58	808	2079	111	290	407	44	101	215	292	43	4	37	59	0	6	38	56	1
203267	Tropheryma whipplei str. Twist	122587	Neisseria meningitidis Z2491	808	2065	115	292	401	44	103	220	285	44	5	36	59	0	7	36	57	0
203267	Tropheryma whipplei str. Twist	1299	Deinococcus radiodurans	808	2997	106	308	394	37	95	228	285	36	2	45	53	1	9	35	56	0
203267	Tropheryma whipplei str. Twist	1360	Lactococcus lactis subsp. lactis	808	2267	110	314	384	46	101	226	281	45	3	50	47	0	6	38	56	1
203267	Tropheryma whipplei str. Twist	13773	Pyrobaculum aerophilum	808	2605	22	170	616	12	19	128	461	11	0	24	76	0	3	18	79	1
203267	Tropheryma whipplei str. Twist	138677	Chlamydophila pneumoniae J138	808	1069	62	234	512	31	58	183	367	31	1	26	73	0	3	25	72	0
203267	Tropheryma whipplei str. Twist	1423	Bacillus subtilis	808	4112	150	348	310	70	134	252	222	69	6	53	41	0	10	43	47	1
203267	Tropheryma whipplei str. Twist	1488	Clostridium acetobutylicum	808	3672	126	312	370	67	112	239	257	64	7	36	57	1	7	37	56	2
203267	Tropheryma whipplei str. Twist	1502	Clostridium perfringens	808	2660	114	302	392	57	100	233	275	55	6	39	55	1	8	30	62	1
203267	Tropheryma whipplei str. Twist	155864	Escherichia coli O157:H7 EDL933	808	5324	139	326	343	55	121	242	245	55	8	44	48	0	10	40	50	0
203267	Tropheryma whipplei str. Twist	158878	Staphylococcus aureus subsp. aureus Mu50	808	2714	134	332	342	63	122	246	240	62	3	50	47	0	9	36	55	1
203267	Tropheryma whipplei str. Twist	158879	Staphylococcus aureus subsp. aureus N315	808	2594	134	332	342	62	122	247	239	61	3	50	47	0	9	35	56	1
203267	Tropheryma whipplei str. Twist	160	Treponema pallidum	808	1036	49	232	527	25	47	185	376	25	1	22	77	0	1	25	74	0
203267	Tropheryma whipplei str. Twist	160488	Pseudomonas putida KT2440	808	5350	128	312	368	46	112	228	268	45	5	47	48	0	11	37	52	1
203267	Tropheryma whipplei str. Twist	160490	Streptococcus pyogenes M1 GAS	808	1697	101	282	425	39	92	214	302	38	3	36	61	0	6	32	62	1
203267	Tropheryma whipplei str. Twist	160492	Xylella fastidiosa 9a5c	808	2766	108	298	402	43	91	226	291	42	6	38	56	0	11	34	55	1
203267	Tropheryma whipplei str. Twist	1642	Listeria innocua	808	2968	147	318	343	67	129	230	249	66	6	51	43	0	12	37	51	1
203267	Tropheryma whipplei str. Twist	169963	Listeria monocytogenes EGD-e	808	2846	143	314	351	66	123	230	255	64	6	50	44	0	14	34	52	2
203267	Tropheryma whipplei str. Twist	170187	Streptococcus pneumoniae TIGR4	808	2094	113	300	395	45	102	228	278	44	4	40	56	0	7	32	61	1
203267	Tropheryma whipplei str. Twist	171101	Streptococcus pneumoniae R6	808	2043	116	302	390	51	104	232	272	49	4	39	57	0	8	31	61	2
203267	Tropheryma whipplei str. Twist	176280	Staphylococcus epidermidis ATCC 12228	808	2419	127	326	355	63	118	240	250	62	2	52	46	0	7	34	59	1
203267	Tropheryma whipplei str. Twist	1769	Mycobacterium leprae	808	1605	185	340	283	101	153	253	202	94	14	46	40	2	18	41	41	5
203267	Tropheryma whipplei str. Twist	180835	Agrobacterium tumefaciens str. C58 (U. Washington)	808	4661	136	312	360	54	117	231	260	52	8	43	49	1	11	38	51	1
203267	Tropheryma whipplei str. Twist	181661	Agrobacterium tumefaciens str. C58 (Cereon)	808	4554	123	312	373	48	105	233	270	46	8	42	50	1	10	37	53	1
203267	Tropheryma whipplei str. Twist	182710	Oceanobacillus iheyensis	808	3500	159	322	327	79	143	232	233	78	6	49	45	0	10	41	49	1
203267	Tropheryma whipplei str. Twist	183190	Xylella fastidiosa Temecula1	808	2034	114	292	402	48	98	222	288	47	6	36	58	0	10	34	56	1
203267	Tropheryma whipplei str. Twist	186103	Streptococcus pyogenes MGAS8232	808	1845	103	284	421	40	93	215	300	39	3	37	60	0	7	32	61	1
203267	Tropheryma whipplei str. Twist	186497	Pyrococcus furiosus DSM 3638	808	2065	30	188	590	11	23	131	454	11	3	29	68	0	4	28	68	0
203267	Tropheryma whipplei str. Twist	187410	Yersinia pestis KIM	808	4090	122	338	348	46	106	254	248	46	6	46	48	0	10	38	52	0
203267	Tropheryma whipplei str. Twist	187420	Methanothermobacter thermautotrophicus str. Delta H	808	1873	23	172	613	10	21	125	462	10	0	26	74	0	2	21	77	0
203267	Tropheryma whipplei str. Twist	188937	Methanosarcina acetivorans C2A	808	4540	38	196	574	14	34	140	434	13	0	33	67	0	4	23	73	1
203267	Tropheryma whipplei str. Twist	189518	Leptospira interrogans serovar lai str. 56601	808	4727	110	312	386	43	93	233	282	41	8	39	53	1	9	40	51	1
203267	Tropheryma whipplei str. Twist	190192	Methanopyrus kandleri AV19	808	1687	17	146	645	2	14	108	486	2	1	22	77	0	2	16	82	0
203267	Tropheryma whipplei str. Twist	190304	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	808	2067	105	300	403	45	95	230	283	42	4	37	59	2	6	33	61	1
203267	Tropheryma whipplei str. Twist	190485	Xanthomonas campestris pv. campestris str. ATCC 33913	808	4181	116	312	380	39	97	232	279	38	6	43	51	0	13	37	50	1
203267	Tropheryma whipplei str. Twist	190486	Xanthomonas axonopodis pv. citri str. 306	808	4312	118	316	374	41	97	235	276	40	7	45	48	0	14	36	50	1
203267	Tropheryma whipplei str. Twist	190650	Caulobacter crescentus CB15	808	3737	104	306	398	35	91	234	283	34	7	36	57	0	6	36	58	1
203267	Tropheryma whipplei str. Twist	192952	Methanosarcina mazei Goe1	808	3371	31	176	601	13	27	127	454	12	1	29	70	0	3	20	77	1
203267	Tropheryma whipplei str. Twist	193567	Streptococcus pyogenes SSI-1	808	1861	97	286	425	37	88	218	302	36	2	36	62	0	7	32	61	1
203267	Tropheryma whipplei str. Twist	194439	Chlorobium tepidum TLS	808	2252	116	280	412	43	103	216	289	42	6	35	59	0	7	29	64	1
203267	Tropheryma whipplei str. Twist	196164	Corynebacterium efficiens YS-314	808	2950	208	350	250	116	170	262	176	109	18	47	35	3	20	41	39	4
203267	Tropheryma whipplei str. Twist	196620	Staphylococcus aureus subsp. aureus MW2	808	2632	136	330	342	63	124	246	238	62	3	50	47	0	9	34	57	1
203267	Tropheryma whipplei str. Twist	196627	Corynebacterium glutamicum ATCC 13032	808	2993	237	350	221	123	192	258	158	114	21	50	29	4	24	42	34	5
203267	Tropheryma whipplei str. Twist	197	Campylobacter jejuni	808	1634	87	282	439	22	79	211	318	22	3	42	55	0	5	29	66	0
203267	Tropheryma whipplei str. Twist	197221	Thermosynechococcus elongatus BP-1	808	2475	112	310	386	25	94	233	281	24	6	45	49	0	12	32	56	1
203267	Tropheryma whipplei str. Twist	198094	Bacillus anthracis str. Ames	808	5311	150	334	324	72	131	246	231	70	6	51	43	0	13	37	50	2
203267	Tropheryma whipplei str. Twist	198214	Shigella flexneri 2a str. 301	808	4180	130	318	360	55	114	235	259	55	5	46	49	0	11	37	52	0
203267	Tropheryma whipplei str. Twist	198215	Shigella flexneri 2a str. 2457T	808	4068	137	320	351	57	119	238	251	57	7	44	49	0	11	38	51	0
203267	Tropheryma whipplei str. Twist	198466	Streptococcus pyogenes MGAS315	808	1865	103	292	413	39	93	221	294	38	3	37	60	0	7	34	59	1
203267	Tropheryma whipplei str. Twist	198804	Buchnera aphidicola str. Sg (Schizaphis graminum)	808	545	54	228	526	26	50	177	381	26	2	29	69	0	2	22	76	0
203267	Tropheryma whipplei str. Twist	199310	Escherichia coli CFT073	808	5379	134	328	346	52	117	242	249	52	7	44	49	0	10	42	48	0
203267	Tropheryma whipplei str. Twist	204722	Brucella suis 1330	808	3264	124	310	374	47	107	231	270	47	5	46	49	0	12	33	55	0
203267	Tropheryma whipplei str. Twist	206672	Bifidobacterium longum NCC2705	808	1729	159	338	311	90	137	246	225	86	8	48	44	0	14	44	42	4
203267	Tropheryma whipplei str. Twist	208435	Streptococcus agalactiae 2603V/R	808	2124	112	316	380	45	103	240	265	44	2	44	54	0	7	32	61	1
203267	Tropheryma whipplei str. Twist	208964	Pseudomonas aeruginosa PAO1	808	5567	135	320	353	54	119	231	258	53	5	51	44	0	11	38	51	1
203267	Tropheryma whipplei str. Twist	209261	Salmonella enterica subsp. enterica serovar Typhi Ty2	808	4323	143	312	353	54	124	231	253	54	7	44	49	0	12	37	51	0
203267	Tropheryma whipplei str. Twist	2097	Mycoplasma genitalium	808	484	36	160	612	27	34	125	449	27	0	19	81	0	2	16	82	0
203267	Tropheryma whipplei str. Twist	210007	Streptococcus mutans UA159	808	1960	113	290	405	42	101	228	279	42	3	35	62	0	9	27	64	0
203267	Tropheryma whipplei str. Twist	2104	Mycoplasma pneumoniae	808	689	39	152	617	27	37	120	451	27	0	18	82	0	2	14	84	0
203267	Tropheryma whipplei str. Twist	2107	Mycoplasma pulmonis	808	782	37	160	611	26	36	134	438	26	0	13	87	0	1	13	86	0
203267	Tropheryma whipplei str. Twist	211110	Streptococcus agalactiae NEM316	808	2094	110	314	384	44	100	239	269	43	3	42	55	0	7	33	60	1
203267	Tropheryma whipplei str. Twist	211586	Shewanella oneidensis MR-1	808	4324	130	294	384	50	112	220	276	49	6	43	51	0	12	31	57	1
203267	Tropheryma whipplei str. Twist	212717	Clostridium tetani E88	808	2373	94	316	398	52	83	232	293	50	6	45	49	1	5	39	56	1
203267	Tropheryma whipplei str. Twist	2130	Ureaplasma urealyticum	808	614	39	162	607	28	37	133	438	28	0	16	84	0	2	13	85	0
203267	Tropheryma whipplei str. Twist	214092	Yersinia pestis CO92	808	3885	129	344	335	49	112	258	238	49	6	46	48	0	11	40	49	0
203267	Tropheryma whipplei str. Twist	216895	Vibrio vulnificus CMCP6	808	4537	117	300	391	44	104	223	281	44	3	46	51	0	10	31	59	0
203267	Tropheryma whipplei str. Twist	218496	Tropheryma whipplei TW08/27	808	783	643	152	13	638	497	103	8	496	76	21	3	74	70	28	2	68
203267	Tropheryma whipplei str. Twist	2190	Methanocaldococcus jannaschii	808	1729	19	162	627	3	16	115	477	3	1	26	73	0	2	21	77	0
203267	Tropheryma whipplei str. Twist	220668	Lactobacillus plantarum WCFS1	808	3009	124	304	380	63	111	220	277	61	4	50	46	0	9	34	57	2
203267	Tropheryma whipplei str. Twist	223283	Pseudomonas syringae pv. tomato str. DC3000	808	5471	129	324	355	42	111	242	255	42	5	48	47	0	13	34	53	0
203267	Tropheryma whipplei str. Twist	2234	Archaeoglobus fulgidus	808	2420	26	166	616	6	20	116	472	6	1	28	71	0	5	22	73	0
203267	Tropheryma whipplei str. Twist	223926	Vibrio parahaemolyticus RIMD 2210633	808	4832	128	312	368	41	110	228	270	41	4	53	43	0	14	31	55	0
203267	Tropheryma whipplei str. Twist	224326	Borrelia burgdorferi B31	808	851	46	210	552	23	44	165	399	23	1	21	78	0	1	24	75	0
203267	Tropheryma whipplei str. Twist	224915	Buchnera aphidicola str. Bp (Baizongia pistaciae)	808	504	66	202	540	37	64	156	388	37	1	22	77	0	1	24	75	0
203267	Tropheryma whipplei str. Twist	226185	Enterococcus faecalis V583	808	3113	115	310	383	56	102	232	274	54	4	43	53	0	9	35	56	2
203267	Tropheryma whipplei str. Twist	226186	Bacteroides thetaiotaomicron VPI-5482	808	4778	119	294	395	34	102	223	283	34	8	33	59	0	9	38	53	0
203267	Tropheryma whipplei str. Twist	226900	Bacillus cereus ATCC 14579	808	5234	143	340	325	67	127	251	230	65	6	48	46	0	10	41	49	2
203267	Tropheryma whipplei str. Twist	227377	Coxiella burnetii RSA 493	808	2009	113	288	407	49	99	218	291	49	2	42	56	0	12	28	60	0
203267	Tropheryma whipplei str. Twist	227882	Streptomyces avermitilis MA-4680	808	7575	237	332	239	128	197	243	168	115	18	49	33	7	22	40	38	6
203267	Tropheryma whipplei str. Twist	227941	Chlamydophila caviae GPIC	808	998	61	240	507	25	56	192	360	25	2	23	75	0	3	25	72	0
203267	Tropheryma whipplei str. Twist	228410	Nitrosomonas europaea ATCC 19718	808	2461	126	290	392	52	108	223	277	52	7	34	59	0	11	33	56	0
203267	Tropheryma whipplei str. Twist	2287	Sulfolobus solfataricus	808	2977	24	182	602	11	17	129	462	10	1	29	70	0	6	24	70	1
203267	Tropheryma whipplei str. Twist	2303	Thermoplasma acidophilum	808	1482	25	176	607	5	20	127	461	5	0	28	72	0	5	21	74	0
203267	Tropheryma whipplei str. Twist	233150	Mycoplasma gallisepticum R	808	726	35	178	595	25	33	143	432	25	1	16	83	0	1	19	80	0
203267	Tropheryma whipplei str. Twist	2336	Thermotoga maritima	808	1858	96	290	422	42	84	221	303	41	5	36	59	0	7	33	60	1
203267	Tropheryma whipplei str. Twist	28227	Mycoplasma penetrans	808	1037	35	202	571	18	31	165	412	18	1	20	79	0	3	17	80	0
203267	Tropheryma whipplei str. Twist	28232	Geobacter metallireducens	808	3237	91	316	401	35	78	237	293	35	6	43	51	0	7	36	57	0
203267	Tropheryma whipplei str. Twist	29292	Pyrococcus abyssi	808	1769	28	178	602	13	22	125	461	12	1	31	68	0	5	22	73	1
203267	Tropheryma whipplei str. Twist	29459	Brucella melitensis	808	3198	115	314	379	44	97	234	277	44	6	45	49	0	12	35	53	0
203267	Tropheryma whipplei str. Twist	305	Ralstonia solanacearum	808	3440	126	316	366	57	111	237	260	56	4	45	51	0	11	34	55	1
203267	Tropheryma whipplei str. Twist	36870	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	808	654	60	250	498	23	51	196	361	23	3	33	64	0	6	21	73	0
203267	Tropheryma whipplei str. Twist	375	Bradyrhizobium japonicum	808	8317	125	302	381	54	108	229	271	53	5	45	50	1	12	28	60	0
203267	Tropheryma whipplei str. Twist	381	Mesorhizobium loti	808	6746	123	314	371	54	108	228	272	53	5	46	49	0	10	40	50	1
203267	Tropheryma whipplei str. Twist	382	Sinorhizobium meliloti	808	3341	130	318	360	51	111	235	262	50	6	47	47	0	13	36	51	1
203267	Tropheryma whipplei str. Twist	50339	Thermoplasma volcanium	808	1499	31	180	597	8	25	127	456	7	0	30	70	0	6	23	71	1
203267	Tropheryma whipplei str. Twist	53953	Pyrococcus horikoshii	808	1801	22	174	612	7	16	122	470	6	1	32	67	0	5	20	75	1
203267	Tropheryma whipplei str. Twist	56636	Aeropyrum pernix	808	1840	17	150	641	8	13	108	487	7	1	22	77	0	3	20	77	1
203267	Tropheryma whipplei str. Twist	63363	Aquifex aeolicus	808	1529	91	282	435	17	80	213	315	17	3	40	57	0	8	29	63	0
203267	Tropheryma whipplei str. Twist	64091	Halobacterium sp. NRC-1	808	2075	34	194	580	9	27	146	435	9	2	28	70	0	5	20	75	0
203267	Tropheryma whipplei str. Twist	666	Vibrio cholerae	808	3835	125	302	381	47	110	223	275	47	6	46	48	0	9	33	58	0
203267	Tropheryma whipplei str. Twist	71421	Haemophilus influenzae Rd KW20	808	1714	107	310	391	43	94	234	280	43	7	36	57	0	6	40	54	0
203267	Tropheryma whipplei str. Twist	747	Pasteurella multocida	808	2015	114	322	372	49	100	247	261	49	5	39	56	0	9	36	55	0
203267	Tropheryma whipplei str. Twist	781	Rickettsia conorii	808	1374	70	242	496	33	67	188	353	33	1	24	75	0	2	30	68	0
203267	Tropheryma whipplei str. Twist	782	Rickettsia prowazekii	808	835	65	238	505	33	61	187	360	33	1	22	77	0	3	29	68	0
203267	Tropheryma whipplei str. Twist	813	Chlamydia trachomatis	808	895	61	232	515	28	57	186	365	28	1	24	75	0	3	22	75	0
203267	Tropheryma whipplei str. Twist	83331	Mycobacterium tuberculosis CDC1551	808	4187	218	340	250	114	182	247	179	107	19	48	33	2	17	45	38	5
203267	Tropheryma whipplei str. Twist	83332	Mycobacterium tuberculosis H37Rv	808	3927	219	338	251	114	182	246	180	106	19	48	33	2	18	44	38	6
203267	Tropheryma whipplei str. Twist	83333	Escherichia coli K12	808	4279	143	324	341	56	124	240	244	56	8	44	48	0	11	40	49	0
203267	Tropheryma whipplei str. Twist	83334	Escherichia coli O157:H7	808	5361	137	328	343	55	119	244	245	55	8	44	48	0	10	40	50	0
203267	Tropheryma whipplei str. Twist	83560	Chlamydia muridarum	808	904	64	232	512	29	60	184	364	29	1	26	73	0	3	22	75	0
203267	Tropheryma whipplei str. Twist	84588	Synechococcus sp. WH 8102	808	2089	102	280	426	29	90	214	304	28	3	37	60	0	9	29	62	1
203267	Tropheryma whipplei str. Twist	85962	Helicobacter pylori 26695	808	1576	81	270	457	22	73	205	330	22	5	32	63	0	3	33	64	0
203267	Tropheryma whipplei str. Twist	85963	Helicobacter pylori J99	808	1491	76	268	464	18	68	205	335	18	5	31	64	0	3	32	65	0
203267	Tropheryma whipplei str. Twist	86665	Bacillus halodurans	808	4066	142	328	338	71	126	244	238	70	5	48	47	0	11	36	53	1
203267	Tropheryma whipplei str. Twist	881	Desulfovibrio vulgaris	808	3674	92	308	408	38	82	236	290	38	6	35	59	0	4	37	59	0
203267	Tropheryma whipplei str. Twist	90370	Salmonella enterica subsp. enterica serovar Typhi	808	4395	144	310	354	53	123	232	253	53	8	42	50	0	13	36	51	0
203267	Tropheryma whipplei str. Twist	99287	Salmonella typhimurium LT2	808	4451	141	316	351	55	124	232	252	55	7	44	49	0	10	40	50	0