genome name fPlus fP2M2 fSame fOperon fOperonNaive pCAIPlusMinus pCAIForwardReverse CAIrSame CAIrNSame CAIrSameR CAIrNSameR pbbfGNScore pbbfGNMinus pbbfGNWithin pbbfGNAll pbbfHK pbbfMI pbbfCAIdxdyR pbbfCAIdsqrR pcfCOG pbbfGNScorebbfGNMinus pbbfGNScorebbfGNWithin pbbfGNScorebbfGNAll pbbfGNScorebbfHK pbbfGNScorebbfMI pbbfGNScorebbfCAIdxdyR pbbfGNScorebbfCAIdsqrR pbbfGNScorecfCOG anovabbfGNScore coeffbbfGNScore coeffScaledbbfGNScore anovabbfGNMinus coeffbbfGNMinus coeffScaledbbfGNMinus anovabbfGNWithin coeffbbfGNWithin coeffScaledbbfGNWithin anovacfCOG coeffcfCOG coeffScaledcfCOG coeffIntercept pOpVSpOp pOpLogisticVSpOp pOpDistanceVSpOp SepVSpOp GNScoreVSpOp GNWithinVSpOp pCAIVSpOp CAIdxdyRVSpOp CAIdsqrRVSpOp pOpVSpOpLogistic pOpLogisticVSpOpLogistic pOpDistanceVSpOpLogistic SepVSpOpLogistic GNScoreVSpOpLogistic GNWithinVSpOpLogistic pCAIVSpOpLogistic CAIdxdyRVSpOpLogistic CAIdsqrRVSpOpLogistic pOpVSpOpDistance pOpLogisticVSpOpDistance pOpDistanceVSpOpDistance SepVSpOpDistance GNScoreVSpOpDistance GNWithinVSpOpDistance pCAIVSpOpDistance CAIdxdyRVSpOpDistance CAIdsqrRVSpOpDistance pOpVSSep pOpLogisticVSSep pOpDistanceVSSep SepVSSep GNScoreVSSep GNWithinVSSep pCAIVSSep CAIdxdyRVSSep CAIdsqrRVSSep pOpVSGNScore pOpLogisticVSGNScore pOpDistanceVSGNScore SepVSGNScore GNScoreVSGNScore GNWithinVSGNScore pCAIVSGNScore CAIdxdyRVSGNScore CAIdsqrRVSGNScore pOpVSGNWithin pOpLogisticVSGNWithin pOpDistanceVSGNWithin SepVSGNWithin GNScoreVSGNWithin GNWithinVSGNWithin pCAIVSGNWithin CAIdxdyRVSGNWithin CAIdsqrRVSGNWithin pOpVSpCAI pOpLogisticVSpCAI pOpDistanceVSpCAI SepVSpCAI GNScoreVSpCAI GNWithinVSpCAI pCAIVSpCAI CAIdxdyRVSpCAI CAIdsqrRVSpCAI pOpVSCAIdxdyR pOpLogisticVSCAIdxdyR pOpDistanceVSCAIdxdyR SepVSCAIdxdyR GNScoreVSCAIdxdyR GNWithinVSCAIdxdyR pCAIVSCAIdxdyR CAIdxdyRVSCAIdxdyR CAIdsqrRVSCAIdxdyR pOpVSCAIdsqrR pOpLogisticVSCAIdsqrR pOpDistanceVSCAIdsqrR SepVSCAIdsqrR GNScoreVSCAIdsqrR GNWithinVSCAIdsqrR pCAIVSCAIdsqrR CAIdxdyRVSCAIdsqrR CAIdsqrRVSCAIdsqrR control pCoverS rLogistic fSameGN fControlGN fLeadingSameGN fLaggingSameGN fHighS fHighC fHighSC fOgH fOgL a b c d nSame nConv nDiv nAllLeading nAllLagging fOpCandidateLeading ksLeadingSepD ksLeadingSepP medianLeadingSepD medianLeadingSep medianLaggingSep ksLeadingPSameD ksLeadingPSameP medianLeadingPSameD ksLeadingGNScoreD ksLeadingGNScoreP meanLeadingGNScoreD fPredOp1 threshPSame threshOp1 fPredOp threshOp gSize gSep cerLogistic cerDistance cerLD cerLDC formula postCAIdxdy useCOGsim usefOperonNaive smooth fControlLikeOp fSepMinus3 fSep0 pOpLogisticSepMinus3 pOpLogisticSep0 fOpLogisticSepCanonical pOpSepMinus3 pOpSep0 fOpSepCanonical fLeadingCanonical fLaggingCanonical pOpDistanceSepMinus10 pOpDistanceSepMinus3 pOpDistanceSep0 pOpDistanceSep25 pOpDistanceSep50 pOpDistanceSep100 pOpDistanceSep150 pOpDistanceSep200 pOpDistanceSep300 fMoreno fMorenoGN fMorenoGN0 quartile1SepHighOpLogistic medianSepHighOpLogistic quartile3SepHighOpLogistic scaffoldsS startsS terminiS 160 Treponema pallidum 0.6611969 0.5519689 0.7432432 0.6171387 0.5744042 3.528305e-01 1.933526e-46 0.333771231 -0.230095264 0.37087970 -0.2744444937 2.661549e-16 1.704675e-11 1.000000e+00 2.716334e-16 2.297999e-02 7.626035e-05 6.792061e-19 2.383717e-18 5.881509e-12 1.626825e-03 1.000000e+00 8.252561e-01 6.548567e-03 1.387586e-01 6.082315e-17 6.787922e-17 1.256405e-05 2.661549e-16 6.38674489 0.58898292 1.626825e-03 1.14517875 0.22688535 NA NA NA 4.761865e-05 0.7591450 0.51397155 -6.2528523 1 0.8546548 0.5922897 -0.3278041 0.6954217 NA 0.14258635 0.025408688 -0.005710914 0.8546548 1 0.2047691 -0.16400923 0.7740184 NA 0.009077561 -0.0048486395 0.0372922081 0.5922897 0.2047691 1 -0.4923906 0.1445180 NA -0.005048957 -0.036428211 0.050707345 -0.3278041 -0.16400923 -0.4923906 1 -0.06295421 NA 0.011708409 0.038990709 -0.051369917 0.6954217 0.7740184 0.1445180 -0.06295421 1 NA 0.052165896 0.008601002 0.0135649350 NA NA NA NA NA NA NA NA NA 0.14258635 0.009077561 -0.005048957 0.011708409 0.052165896 NA 1 0.290081107 -0.41155451 0.025408688 -0.0048486395 -0.036428211 0.038990709 0.008601002 NA 0.290081107 1 -0.7374794 -0.005710914 0.0372922081 0.050707345 -0.051369917 0.0135649350 NA -0.41155451 -0.7374794 1 both 0.3454545 0.2636154 0.21818182 0.026315789 0.24500907 0.15068493 0.2688312 0.04135338 0.2104247 0.9345320 0.44199484 0.017599827 0.233631516 0.4255958 0.148808391 770 133 133 685 351 0.7155844 0.07936587 0.2770195656 6.0 25.0 19.0 0.11405581 3.390711e-02 0.0000000000 0.12739809 1.235317e-02 6.4764478 0.5636364 0.7168375 0.4811502 0.5506494 0.4598620 100 50 0.3483287 0.2751564 0.5014364 0.5059941 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.120779221 0.01688312 0.6305420 0.6372465 0.8867925 0.7865237 0.8206179 0.9528302 0.13067151 0.15525114 0.5905333 0.7310493 0.7665590 0.5677622 0.41878340 0.36150801 0.38105001 0.39527587 0.40717002 0.4584416 0.5714286 0.4269103 -3.00 13.0 60.00 15 1036 515 197 Campylobacter jejuni 0.6309670 0.5343047 0.7894737 0.7174889 0.6940462 5.108458e-01 2.295732e-19 0.225767711 0.110763244 0.25448499 0.0712438449 2.242486e-24 1.122699e-27 1.000000e+00 6.986520e-25 2.786773e-03 1.132269e-08 4.181263e-06 1.037634e-06 1.962049e-10 5.452537e-05 1.000000e+00 7.879450e-02 5.140183e-01 8.644831e-01 7.179202e-06 6.848151e-06 9.377539e-03 2.242486e-24 0.17917290 0.16312635 5.452537e-05 0.85044211 0.72584382 NA NA NA 2.186903e-02 0.4466631 0.21188450 -0.5963874 1 0.7019242 0.7907037 -0.5953440 0.7151468 NA 0.16522772 0.068063063 -0.111508009 0.7019242 1 0.2277388 -0.17306623 0.8084050 NA 0.026560192 0.0069081963 -0.0179803901 0.7907037 0.2277388 1 -0.6363167 0.2531739 NA 0.081271803 0.036008736 -0.067376291 -0.5953440 -0.17306623 -0.6363167 1 -0.19126286 NA -0.047142662 -0.007402636 0.036354780 0.7151468 0.8084050 0.2531739 -0.19126286 1 NA 0.086051676 0.023197257 -0.0515251206 NA NA NA NA NA NA NA NA NA 0.16522772 0.026560192 0.081271803 -0.047142662 0.086051676 NA 1 0.569937109 -0.65057294 0.068063063 0.0069081963 0.036008736 -0.007402636 0.023197257 NA 0.569937109 1 -0.7667104 -0.111508009 -0.0179803901 -0.067376291 0.036354780 -0.0515251206 NA -0.65057294 -0.7667104 1 both 0.2666667 0.2507597 0.30852713 0.069767442 0.31235431 0.30092593 0.2937984 0.06104651 0.2447980 0.9364278 0.59320907 0.018677412 0.256443626 0.3059538 0.388092408 1290 172 172 1031 603 0.6651163 0.03383191 0.8973337348 0.5 3.0 2.5 0.04804455 5.209104e-01 0.0000000000 0.03718272 8.218394e-01 1.7250377 0.7302326 0.8505218 0.5900105 0.7302326 0.5798976 100 50 0.4141092 0.6643715 0.7007464 0.7030998 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.190697674 0.07286822 0.7223653 0.7456699 0.8176471 0.9044553 0.9322387 1.0000000 0.25407925 0.28240741 0.6816763 0.8078988 0.8509356 0.3106021 0.19010758 0.05955265 0.03917310 0.03439642 0.03247982 0.7085271 0.8994975 0.6233184 -3.00 0.0 9.00 NA NA NA 305 Ralstonia solanacearum 0.6116279 0.5249216 0.7284884 0.6085605 0.5881919 1.031266e-01 1.108974e-07 0.564009068 0.529482233 0.54243970 0.4256378619 1.079266e-48 1.120687e-47 1.000000e+00 4.049733e-45 3.321369e-12 2.956638e-27 2.870656e-05 1.000155e-03 2.798655e-26 2.591656e-02 1.000000e+00 6.848527e-01 1.397001e-02 3.973110e-02 1.493319e-04 3.807533e-03 4.241662e-08 1.079266e-48 0.51003551 0.39248105 2.591656e-02 0.47184726 0.31776087 NA NA NA 4.155649e-08 0.6146291 0.31824891 -0.5715641 1 0.6812774 0.7826182 -0.7522373 0.6786730 NA 0.27078814 0.112428822 -0.175824361 0.6812774 1 0.2408624 -0.23651216 0.8131764 NA 0.057527232 0.0459888910 -0.0612365593 0.7826182 0.2408624 1 -0.8757774 0.2219650 NA 0.155980416 0.055910285 -0.114420612 -0.7522373 -0.23651216 -0.8757774 1 -0.19901809 NA -0.153987887 -0.059850217 0.124810226 0.6786730 0.8131764 0.2219650 -0.19901809 1 NA 0.058319525 0.008435291 -0.0064893096 NA NA NA NA NA NA NA NA NA 0.27078814 0.057527232 0.155980416 -0.153987887 0.058319525 NA 1 0.398940033 -0.53168790 0.112428822 0.0459888910 0.055910285 -0.059850217 0.008435291 NA 0.398940033 1 -0.6767079 -0.175824361 -0.0612365593 -0.114420612 0.124810226 -0.0064893096 NA -0.53168790 -0.6767079 1 both 0.3727055 0.2389014 0.30845970 0.109207709 0.33007335 0.26781609 0.3479649 0.13383298 0.2898256 0.8416119 0.45295180 0.055113510 0.237737865 0.4118081 0.176383710 2506 467 467 2104 1336 0.6528332 0.03190569 0.6097284025 -1.5 43.5 45.0 0.08166681 1.025167e-03 0.0000000000 0.07817216 1.933563e-03 3.8476547 0.5973663 0.6718111 0.5369345 0.6029529 0.5443338 124 62 0.3229621 0.5101617 0.6080874 0.6160967 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.121308859 0.02035116 0.6312014 0.6263486 0.4507042 0.8550968 0.8595721 1.0000000 0.14547677 0.13448276 0.7897641 0.7952516 0.8055409 0.7806748 0.47992720 0.46352053 0.29875967 0.14701566 0.05507420 0.4229848 0.5588616 0.3623774 3.00 22.0 67.00 NA NA NA 375 Bradyrhizobium japonicum 0.5700373 0.5098104 0.6724781 0.5020792 0.4934679 1.756663e-01 9.792886e-03 0.632087889 0.470521433 0.58152079 0.4173671608 1.884182e-88 2.146113e-91 1.964395e-51 6.710104e-42 5.855946e-35 1.801697e-55 2.411694e-16 1.121429e-15 8.286441e-81 1.275755e-10 4.162574e-08 6.626431e-04 4.218342e-01 9.774903e-06 1.097634e-11 1.232888e-11 2.309418e-47 1.884182e-88 0.37215992 0.29313257 6.789556e-04 0.48905158 0.34193583 4.162574e-08 -0.066623451 -0.026110138 7.627446e-45 0.8123871 0.45832022 -0.4540713 1 0.6082893 0.8843308 -0.8473949 0.5048090 0.37425320 0.23765445 0.113908402 -0.210804621 0.6082893 1 0.2860403 -0.27255735 0.6468937 0.55923635 0.060427694 0.1135250860 -0.0920118451 0.8843308 0.2860403 1 -0.9605033 0.2321647 0.18223282 0.139217586 -0.026286110 -0.106543374 -0.8473949 -0.27255735 -0.9605033 1 -0.20676662 -0.16155408 -0.136766204 0.016048808 0.114158032 0.5048090 0.6468937 0.2321647 -0.20676662 1 0.4738848 0.033821025 0.079247359 -0.0548145514 0.37425320 0.55923635 0.18223282 -0.16155408 0.4738848 1 0.009635473 0.051775208 -0.0261538640 0.23765445 0.060427694 0.139217586 -0.136766204 0.033821025 0.009635473 1 0.390844903 -0.57448504 0.113908402 0.1135250860 -0.026286110 0.016048808 0.079247359 0.051775208 0.390844903 1 -0.6564025 -0.210804621 -0.0920118451 -0.106543374 0.114158032 -0.0548145514 -0.0261538640 -0.57448504 -0.6564025 1 both 0.4870374 0.2475521 0.16055784 0.034140969 0.17051510 0.14537246 0.3123547 0.10279001 0.2437177 0.8333099 0.33909873 0.052066439 0.208221851 0.5065321 -0.013064147 5593 1362 1362 4741 3576 0.6039692 0.04743494 0.0048580795 -15.0 49.0 64.0 0.03231720 1.222772e-01 0.0000000000 0.02547035 3.506115e-01 1.2436970 0.4557483 0.6171300 0.4068659 0.4580726 0.4038202 200 100 0.4343912 0.5934001 0.6917187 0.6975904 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.117110674 0.01787949 0.6356227 0.6092213 0.5841060 0.9781097 0.9634307 1.0000000 0.13824748 0.13002257 0.9197919 0.9757269 0.9645811 0.5908479 0.37031943 0.29535681 0.27679621 0.21616171 0.08865745 0.3681387 0.6302895 0.3179979 -3.00 11.0 55.00 NA NA NA 381 Mesorhizobium loti 0.5505485 0.5051103 0.6617255 0.4827632 0.4782418 2.743254e-01 1.152856e-02 0.499553282 0.324433089 0.47238248 0.2779430591 4.939054e-80 1.306717e-95 1.342308e-66 6.950722e-59 1.355324e-25 7.556745e-47 4.873791e-18 3.308122e-18 2.642778e-83 2.543977e-24 2.003063e-25 4.883084e-01 2.215671e-01 1.027352e-07 3.173683e-12 7.819739e-13 1.539965e-49 4.939054e-80 0.61879407 0.52135825 1.267777e-01 0.15402228 0.11854345 2.003063e-25 0.459251482 0.226666353 7.337368e-44 0.8002700 0.52462607 -0.6613767 1 0.7665865 0.7800312 -0.7432325 0.5640904 0.56767281 0.25141556 0.157567815 -0.223152922 0.7665865 1 0.3064019 -0.28771645 0.6252738 0.75286119 0.082402053 0.1430352718 -0.1185217500 0.7800312 0.3064019 1 -0.9479098 0.2135978 0.22906579 0.134173329 -0.027205018 -0.087773415 -0.7432325 -0.28771645 -0.9479098 1 -0.18667551 -0.20685708 -0.125161631 0.025365819 0.087342932 0.5640904 0.6252738 0.2135978 -0.18667551 1 0.4896324 0.052998849 0.110336332 -0.0865472490 0.56767281 0.75286119 0.22906579 -0.20685708 0.4896324 1 0.052979744 0.086220034 -0.0818247279 0.25141556 0.082402053 0.134173329 -0.125161631 0.052998849 0.052979744 1 0.412438906 -0.64588170 0.157567815 0.1430352718 -0.027205018 0.025365819 0.110336332 0.086220034 0.412438906 1 -0.6922345 -0.223152922 -0.1185217500 -0.087773415 0.087342932 -0.0865472490 -0.0818247279 -0.64588170 -0.6922345 1 both 0.5112007 0.2807508 0.17876344 0.041191937 0.19945568 0.15063425 0.4090502 0.16038563 0.3249333 0.7954224 0.25869229 0.083682511 0.241685158 0.5217582 -0.043516337 4464 1143 1139 3714 3032 0.5761649 0.02065421 0.7410611170 -3.5 53.0 56.5 0.05393258 3.522891e-03 0.0000000000 0.05735864 1.534168e-03 2.3641750 0.4603495 0.5868964 0.4698122 0.4578853 0.4625246 200 100 0.5233387 0.4695642 0.6369124 0.6477513 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.126792115 0.03068996 0.5954546 0.6365409 0.6159317 0.8463916 0.8648944 0.9815078 0.15007776 0.16754757 0.7341864 0.8519018 0.8525537 0.6058737 0.51008957 0.36786659 0.24040438 0.20431126 0.10663465 0.3819444 0.5902256 0.3366067 -3.00 11.0 69.00 NA NA NA 382 Sinorhizobium meliloti 0.5627058 0.5078640 0.6869201 0.5365123 0.5296606 5.831156e-04 6.052836e-02 0.509046621 0.349110392 0.35775926 0.2012489621 3.120423e-59 1.772490e-64 1.167718e-43 1.137096e-61 1.403741e-19 9.326000e-25 3.610668e-05 2.573542e-05 5.042842e-40 2.643139e-10 1.296571e-12 2.657557e-05 7.149126e-01 2.705358e-02 3.053682e-03 2.629529e-03 1.125113e-18 3.120423e-59 0.63977559 0.63674446 9.434749e-01 -0.01362846 -0.01231412 1.296571e-12 0.558720279 0.309748920 6.390088e-17 0.7288744 0.46461416 -0.7228059 1 0.8532228 0.7443212 -0.7443115 0.6657554 0.67452899 0.19247368 0.164881612 -0.201897657 0.8532228 1 0.3377593 -0.33774214 0.7361290 0.82309460 0.076124292 0.0767892146 -0.0879742143 0.7443212 0.3377593 1 -0.9999998 0.2303489 0.25518459 0.108143752 0.048212458 -0.112376635 -0.7443115 -0.33774214 -0.9999998 1 -0.23034894 -0.25518614 -0.108132270 -0.048194625 0.112362414 0.6657554 0.7361290 0.2303489 -0.23034894 1 0.5393599 0.073631781 0.080204220 -0.0866333123 0.67452899 0.82309460 0.25518459 -0.25518614 0.5393599 1 0.027782094 0.010860404 -0.0447922141 0.19247368 0.076124292 0.108143752 -0.108132270 0.073631781 0.027782094 1 0.686867384 -0.77884909 0.164881612 0.0767892146 0.048212458 -0.048194625 0.080204220 0.010860404 0.686867384 1 -0.7521890 -0.201897657 -0.0879742143 -0.112376635 0.112362414 -0.0866333123 -0.0447922141 -0.77884909 -0.7521890 1 both 0.4557734 0.3046689 0.25620915 0.057361377 0.27507375 0.22896699 0.4701525 0.20363289 0.3867106 0.7962862 0.29307430 0.095776565 0.278599375 0.4703394 0.059321248 2295 523 523 1880 1461 0.5908497 0.04019527 0.3314736045 -1.0 69.0 70.0 0.08557400 5.917257e-04 0.0283925348 0.05040902 1.192330e-01 3.1728442 0.5276688 0.6771850 0.4930063 0.5224401 0.4854579 114 57 0.5211597 0.4946781 0.6634333 0.6695102 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.112854031 0.03180828 0.6372797 0.6688042 0.6506024 0.8769796 0.8706578 0.9819277 0.15412979 0.13099042 0.8675896 0.8597437 0.8415755 0.7041986 0.56540627 0.32876842 0.28812543 0.26825026 0.17751045 0.3764706 0.5816327 0.3057996 0.00 15.0 76.50 NA NA NA 666 Vibrio cholerae 0.5997392 0.5198958 0.6704042 0.4853012 0.4676149 8.597226e-03 1.347042e-01 0.291585445 0.021199743 0.29261503 0.0380091930 6.208894e-78 6.408124e-85 2.086764e-60 1.571846e-75 2.132006e-19 1.572495e-35 1.399042e-12 1.435350e-13 2.179812e-39 4.544269e-14 1.164755e-12 6.875316e-05 3.413873e-06 1.553451e-01 6.364334e-05 3.933307e-06 5.411534e-10 6.208894e-78 0.40487619 0.39049765 1.133497e-02 0.64762650 0.54290494 1.164755e-12 -0.025519395 -0.015010777 1.083174e-08 0.5431051 0.31819089 -0.3606578 1 0.8824668 0.6922345 -0.6032359 0.7624068 0.73919808 0.28269081 0.260862469 -0.284806989 0.8824668 1 0.3479287 -0.30277710 0.8087373 0.85209003 0.180028248 0.1665782864 -0.1824870338 0.6922345 0.3479287 1 -0.7874877 0.3089218 0.29429858 0.080817732 0.056420851 -0.121707828 -0.6032359 -0.30277710 -0.7874877 1 -0.25155893 -0.23620022 -0.091523926 -0.062405489 0.131416375 0.7624068 0.8087373 0.3089218 -0.25155893 1 0.6517774 0.188280911 0.177193409 -0.1754017531 0.73919808 0.85209003 0.29429858 -0.23620022 0.6517774 1 0.122726085 0.109905309 -0.1382865863 0.28269081 0.180028248 0.080817732 -0.091523926 0.188280911 0.122726085 1 0.936539223 -0.89602095 0.260862469 0.1665782864 0.056420851 -0.062405489 0.177193409 0.109905309 0.936539223 1 -0.7780991 -0.284806989 -0.1824870338 -0.121707828 0.131416375 -0.1754017531 -0.1382865863 -0.89602095 -0.7780991 1 both 0.4916375 0.3095050 0.33294438 0.094145570 0.35774310 0.28729282 0.5301439 0.25712025 0.4401565 0.7417928 0.15825699 0.136886981 0.256369950 0.5323851 -0.064770119 2571 632 632 2300 1535 0.6479969 0.04345871 0.2179883277 -4.0 39.0 43.0 0.08118363 8.787479e-04 0.0214908990 0.08680533 2.902828e-04 3.7404598 0.4679113 0.6208269 0.5016294 0.4663555 0.4969028 128 64 0.5760211 0.4097615 0.6493723 0.6617953 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.064955270 0.02878257 0.5711207 0.6217666 0.5601660 0.7326457 0.7720090 0.8423237 0.09543818 0.09060773 0.6483967 0.7348497 0.7723868 0.6744689 0.58131874 0.43612631 0.26004991 0.13366265 0.06692811 0.3963438 0.5794393 0.3049563 0.00 13.5 53.75 NA NA NA 747 Pasteurella multocida 0.5875931 0.5153451 0.7270471 0.6133132 0.6008000 6.801648e-01 4.693518e-03 0.152713234 0.044224417 0.17163897 0.0125693619 4.821414e-51 9.846601e-51 1.000000e+00 1.553459e-45 2.924334e-06 2.732686e-20 4.568913e-04 3.648649e-04 3.305018e-27 1.605447e-05 1.000000e+00 2.457413e-01 8.823741e-01 4.674878e-01 5.489775e-02 3.538645e-02 1.100476e-08 4.821414e-51 0.53969226 0.62079359 1.605447e-05 0.43991072 0.48835340 NA NA NA 6.293739e-08 0.6107650 0.42988461 -0.5625132 1 0.8794091 0.7155392 -0.6626808 0.8043492 NA 0.18521899 0.158031533 -0.177068031 0.8794091 1 0.3633573 -0.35126397 0.8790186 NA 0.100500261 0.1084810588 -0.0935881974 0.7155392 0.3633573 1 -0.8144148 0.3188907 NA 0.088188218 0.038268156 -0.090698253 -0.6626808 -0.35126397 -0.8144148 1 -0.32266125 NA -0.087751346 -0.039735727 0.092391653 0.8043492 0.8790186 0.3188907 -0.32266125 1 NA 0.107284022 0.110201119 -0.1054060991 NA NA NA NA NA NA NA NA NA 0.18521899 0.100500261 0.088188218 -0.087751346 0.107284022 NA 1 0.846628311 -0.88449021 0.158031533 0.1084810588 0.038268156 -0.039735727 0.110201119 NA 0.846628311 1 -0.8011454 -0.177068031 -0.0935881974 -0.090698253 0.092391653 -0.1054060991 NA -0.88449021 -0.8011454 1 both 0.3754266 0.3373695 0.57952218 0.289090909 0.57048458 0.59425494 0.3993174 0.11272727 0.3210918 0.8873059 0.41033864 0.045000732 0.309315941 0.3992000 0.201599908 1465 275 275 1184 831 0.6197952 0.03639304 0.7504148470 0.5 37.5 37.0 0.03598573 7.626276e-01 -0.0188621549 0.03489430 7.945715e-01 1.6637458 0.6286689 0.7989362 0.5619017 0.6266212 0.5518103 100 50 0.5356943 0.5523092 0.6945756 0.7000516 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.046416382 0.04436860 0.6574343 0.7414153 0.7293233 0.7799236 0.8386482 0.9022556 0.09251101 0.08797127 0.6729431 0.6831677 0.7010721 0.7445621 0.57905353 0.28679537 0.13955613 0.08641856 0.05639094 0.4621160 0.5747939 0.3068182 3.25 17.0 63.00 NA NA NA 781 Rickettsia conorii 0.6331878 0.5354780 0.7685590 0.6792096 0.6528649 6.982684e-01 7.844378e-04 0.129056137 -0.045539010 0.14902089 -0.0290779781 2.486190e-08 8.981583e-10 4.236618e-03 9.953671e-06 6.480322e-07 1.956504e-06 7.405146e-04 5.283837e-02 1.431819e-11 6.516666e-03 3.906292e-01 3.081860e-01 3.920088e-02 8.133901e-02 6.852025e-03 2.297363e-01 7.362106e-07 2.486190e-08 -0.90869690 -0.03722478 1.620402e-03 5.23557838 0.57305908 3.906292e-01 -1.042482870 -0.193018992 7.684416e-06 0.7753181 0.43682312 -3.2895094 1 0.6286434 0.8017805 -0.4885362 0.5297094 0.43735665 0.25669046 0.199690565 -0.225338290 0.6286434 1 0.1808772 -0.10204164 0.5993965 0.36284098 0.142545429 0.1388550574 -0.1543713373 0.8017805 0.1808772 1 -0.5453900 0.2026783 0.26132517 0.115174381 0.075164518 -0.099008369 -0.4885362 -0.10204164 -0.5453900 1 -0.15425837 -0.11213813 -0.074775608 -0.058496538 0.038837866 0.5297094 0.5993965 0.2026783 -0.15425837 1 0.4415070 0.135773805 0.135368483 -0.1673363995 0.43735665 0.36284098 0.26132517 -0.11213813 0.4415070 1 0.162882962 0.087398640 -0.2106864169 0.25669046 0.142545429 0.115174381 -0.074775608 0.135773805 0.162882962 1 0.514537675 -0.45575833 0.199690565 0.1388550574 0.075164518 -0.058496538 0.135368483 0.087398640 0.514537675 1 -0.8145526 -0.225338290 -0.1543713373 -0.099008369 0.038837866 -0.1673363995 -0.2106864169 -0.45575833 -0.8145526 1 both 0.3011364 0.1830494 0.13541667 0.031446541 0.15492958 0.09537572 0.3267045 0.17295597 0.2911208 0.8162282 0.57359584 0.060039084 0.206626378 0.3471351 0.305729866 1056 159 159 870 504 0.6723485 0.07819751 0.1162425783 28.0 102.0 74.0 0.08558170 6.623165e-02 0.0000000000 0.07221363 1.766100e-01 4.3411773 0.7651515 0.7607679 0.5995304 0.7405303 0.6006720 100 50 0.3046393 0.5577556 0.5817627 0.5867329 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.042613636 0.01136364 0.6928285 0.7165288 1.0000000 0.8809434 0.9020637 1.0000000 0.05492958 0.05202312 0.7057068 0.7803084 0.8055883 0.6492532 0.51787389 0.52886549 0.75966950 0.65987066 0.20249347 0.2869318 0.5174825 0.2508215 5.25 27.5 151.75 NA NA NA 782 Rickettsia prowazekii 0.6263473 0.5319273 0.7508982 0.6481545 0.6230057 7.966400e-01 1.365994e-08 0.248292045 0.200406173 0.23705679 0.1770476557 5.933406e-09 4.650589e-12 8.395048e-02 3.395174e-08 8.661305e-05 2.800954e-07 6.685198e-02 3.494970e-01 3.370943e-06 8.925600e-05 5.084057e-01 1.921252e-01 2.509906e-01 1.513962e-02 3.136934e-01 3.321936e-01 1.302970e-02 5.933406e-09 -3.29815920 -0.28063594 1.010598e-04 6.69554034 1.01162103 5.084057e-01 -0.284385613 -0.034340199 1.050060e-01 0.4196253 0.17607681 -2.1028101 1 0.6955198 0.7572142 -0.6413097 0.6856627 0.30345632 0.31290388 0.306343060 -0.293918011 0.6955198 1 0.1651080 -0.10258252 0.7232528 0.39044384 0.166164034 0.1806736848 -0.1684895030 0.7572142 0.1651080 1 -0.8510381 0.2703663 0.15067912 0.102837316 0.111591311 -0.127008377 -0.6413097 -0.10258252 -0.8510381 1 -0.22250482 -0.09884063 -0.080011972 -0.098364180 0.113125227 0.6856627 0.7232528 0.2703663 -0.22250482 1 0.2158260 0.135581392 0.178351408 -0.1306937923 0.30345632 0.39044384 0.15067912 -0.09884063 0.2158260 1 0.168143477 0.130382239 -0.1455694028 0.31290388 0.166164034 0.102837316 -0.080011972 0.135581392 0.168143477 1 0.810311750 -0.77934175 0.306343060 0.1806736848 0.111591311 -0.098364180 0.178351408 0.130382239 0.810311750 1 -0.8112605 -0.293918011 -0.1684895030 -0.127008377 0.113125227 -0.1306937923 -0.1455694028 -0.77934175 -0.8112605 1 both 0.3317384 0.2074666 0.23763955 0.067307692 0.26794258 0.17703349 0.3763955 0.19711538 0.3317365 0.8025711 0.51462360 0.074311368 0.227772799 0.3769943 0.246011489 627 104 104 523 312 0.6666667 0.05263158 0.8349427722 10.0 97.0 87.0 0.14832536 4.349761e-03 0.0439494002 0.10287081 1.047729e-01 8.3980568 0.5709729 0.7632069 0.4655012 0.5901116 0.4675892 100 50 0.3169907 0.3390309 0.4599445 0.4709594 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.055821372 0.01594896 0.6563442 0.6875531 0.6222222 0.8393353 0.8816983 1.0000000 0.07655502 0.06220096 0.6960067 0.7742484 0.8041888 0.6154878 0.45403396 0.35489590 0.50670038 0.40545497 0.30988640 0.3141946 0.4832215 0.2615063 3.25 25.0 136.25 NA NA NA 813 Chlamydia trachomatis 0.5664804 0.5088393 0.7162011 0.5969861 0.5894815 1.979979e-01 1.813822e-14 0.259919300 -0.065933991 0.28724897 -0.0428530245 5.214710e-16 3.772888e-15 1.496065e-04 9.732563e-10 3.010771e-03 3.095621e-04 5.798860e-06 7.617904e-08 6.497924e-14 1.999012e-04 2.790471e-02 1.532703e-02 3.819487e-01 2.969040e-01 6.071815e-05 1.498949e-06 9.605299e-05 5.214710e-16 5.87699524 0.41395466 2.547053e-03 1.54925189 0.49826003 2.790471e-02 -0.323954884 -0.087363820 3.233602e-05 0.7372621 0.56140480 -4.9604297 1 0.8063552 0.7482806 -0.7419135 0.6449121 0.48348728 0.11833841 -0.029510150 -0.020259186 0.8063552 1 0.2950738 -0.30144680 0.6972390 0.49162068 0.082007121 0.0040182563 -0.0268304838 0.7482806 0.2950738 1 -0.9162059 0.2410788 0.30773424 0.018680521 -0.054925392 -0.012678048 -0.7419135 -0.30144680 -0.9162059 1 -0.23542910 -0.31881652 -0.027118341 0.048028132 0.028263239 0.6449121 0.6972390 0.2410788 -0.23542910 1 0.2429636 0.030742242 0.068391320 -0.0682926425 0.48348728 0.49162068 0.30773424 -0.31881652 0.2429636 1 0.010256841 -0.010612452 -0.0544713822 0.11833841 0.082007121 0.018680521 -0.027118341 0.030742242 0.010256841 1 -0.083012233 0.25011655 -0.029510150 0.0040182563 -0.054925392 0.048028132 0.068391320 -0.010612452 -0.083012233 1 -0.7421376 -0.020259186 -0.0268304838 -0.012678048 0.028263239 -0.0682926425 -0.0544713822 0.25011655 -0.7421376 1 both 0.3962559 0.2861740 0.19656786 0.015748031 0.23482850 0.14122137 0.3120125 0.08661417 0.2480447 0.8860407 0.45498754 0.035556720 0.240899041 0.4105185 0.178963019 641 127 127 507 388 0.5912637 0.09095853 0.1540297259 1.5 29.0 27.5 0.12357751 1.762790e-02 0.0000000000 0.12565208 1.501864e-02 9.8944726 0.5678627 0.7287508 0.4347417 0.5694228 0.4191861 100 50 0.4540886 0.6021910 0.6888387 0.6890660 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.071762871 0.01404056 0.6763543 0.7065900 0.7272727 0.8627438 0.8860580 0.9818182 0.07387863 0.10305344 0.8228745 0.8080051 0.7956035 0.7512103 0.43677002 0.17092119 0.14534524 0.14571166 0.15184323 0.4586583 0.7301587 0.3922330 -3.00 8.5 24.00 NA NA NA 881 Desulfovibrio vulgaris 0.5453772 0.5041182 0.6894498 0.5456394 0.5420866 7.709501e-01 9.457655e-06 0.379710126 0.250211250 0.40952291 0.0616954167 2.467590e-57 4.243211e-61 1.000000e+00 1.376268e-56 4.663726e-37 3.011390e-37 3.826570e-19 8.277219e-21 9.837723e-44 3.150698e-05 1.000000e+00 6.781351e-04 1.480855e-05 1.224055e-03 2.101381e-13 4.004245e-14 4.543830e-19 2.467590e-57 0.06767797 0.10028185 3.150698e-05 0.95112044 0.88231755 NA NA NA 2.573132e-17 0.7076567 0.48120755 -0.5242069 1 0.8004174 0.5714666 -0.3724360 0.6424857 NA 0.35247672 0.286227203 -0.315357867 0.8004174 1 0.1451434 -0.10007309 0.7198724 NA 0.150112269 0.1149620071 -0.1239505994 0.5714666 0.1451434 1 -0.5756240 0.1766361 NA 0.071715965 0.076061275 -0.102265010 -0.3724360 -0.10007309 -0.5756240 1 -0.13965537 NA -0.087470662 -0.056499323 0.125458204 0.6424857 0.7198724 0.1766361 -0.13965537 1 NA 0.138544447 0.152237430 -0.1310228405 NA NA NA NA NA NA NA NA NA 0.35247672 0.150112269 0.071715965 -0.087470662 0.138544447 NA 1 0.566322886 -0.68149911 0.286227203 0.1149620071 0.076061275 -0.056499323 0.152237430 NA 0.566322886 1 -0.7129405 -0.315357867 -0.1239505994 -0.102265010 0.125458204 -0.1310228405 NA -0.68149911 -0.7129405 1 both 0.4504319 0.2687349 0.16700946 0.009132420 0.16654545 0.16761364 0.4208145 0.20730594 0.3545094 0.7744180 0.37328333 0.094928162 0.230958156 0.4579134 0.084173239 2431 547 548 1923 1603 0.5656109 0.04469697 0.1837525044 -1.5 37.0 38.5 0.02565152 8.267784e-01 0.0000000000 0.01677273 9.960394e-01 -1.0665345 0.4352118 0.6174152 0.4372189 0.4459070 0.4420103 120 60 0.3910821 0.2147615 0.4169526 0.4333415 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.097490745 0.02344714 0.5734554 0.6255827 0.4455782 0.6331264 0.7313512 0.6394558 0.12509091 0.11553030 0.4757417 0.5851566 0.6628506 0.5494913 0.53594272 0.50529116 0.48630461 0.44061315 0.32789764 0.4253394 0.5837438 0.3935802 0.00 14.0 73.00 NA NA NA 1148 Synechocystis sp. PCC 6803 0.5285759 0.5016332 0.6608778 0.4849314 0.4834978 4.104581e-01 5.803648e-01 0.314728965 0.116399716 0.23984414 0.0232959926 4.257246e-24 1.390364e-28 1.000000e+00 4.134727e-24 8.191939e-02 3.914105e-05 2.205400e-08 1.019034e-06 6.769886e-19 2.132388e-06 1.000000e+00 7.900878e-01 6.038483e-01 4.081421e-01 1.016218e-07 1.352298e-05 4.609111e-11 4.257246e-24 -0.13287019 -0.08513895 2.132388e-06 1.12236673 0.53941181 NA NA NA 2.048753e-08 0.7246114 0.29321991 -0.4551044 1 0.7057513 0.7234602 -0.6392811 0.5534440 NA 0.24615800 0.210882758 -0.204184236 0.7057513 1 0.1587264 -0.16469752 0.6238526 NA 0.059544547 0.0579497358 -0.0360260854 0.7234602 0.1587264 1 -0.8163026 0.1348784 NA 0.102003013 0.091595719 -0.090582835 -0.6392811 -0.16469752 -0.8163026 1 -0.10886078 NA -0.092922538 -0.071446858 0.084809074 0.5534440 0.6238526 0.1348784 -0.10886078 1 NA 0.040476509 0.020650707 -0.0549149186 NA NA NA NA NA NA NA NA NA 0.24615800 0.059544547 0.102003013 -0.092922538 0.040476509 NA 1 0.735802451 -0.69530309 0.210882758 0.0579497358 0.091595719 -0.071446858 0.020650707 NA 0.735802451 1 -0.7981083 -0.204184236 -0.0360260854 -0.090582835 0.084809074 -0.0549149186 NA -0.69530309 -0.7981083 1 both 0.5131390 0.1978412 0.14237936 0.031657356 0.12840809 0.15899582 0.1925466 0.05400372 0.1455636 0.8551361 0.39487636 0.027893042 0.136760500 0.5165022 -0.033004381 2093 537 537 1674 1493 0.5432394 0.04276467 0.2982925085 8.5 96.0 87.5 0.04757620 1.903767e-01 0.0000000000 0.03761458 4.544519e-01 -4.0024882 0.3430483 0.6512670 0.4320309 0.3540373 0.4164050 104 52 0.3154476 0.2711613 0.4396443 0.4541426 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.027711419 0.01098901 0.5593249 0.6213969 0.3703704 0.7907347 0.7925761 0.9629630 0.03869833 0.03870293 0.8359847 0.7803217 0.7355147 0.4867946 0.49519924 0.51339488 0.45267788 0.36413691 0.20192906 0.1920688 0.2516779 0.1821727 9.50 61.0 108.25 NA NA NA 1299 Deinococcus radiodurans 0.5575576 0.5066257 0.6649983 0.4887011 0.4827063 2.625773e-01 2.937534e-01 0.409197133 0.089038520 0.11142644 -0.0171257399 1.456637e-29 2.903389e-11 1.000000e+00 9.412506e-30 1.034690e-03 6.557153e-13 1.749556e-03 5.832007e-06 3.083839e-29 1.912747e-03 1.000000e+00 6.202629e-02 2.574078e-01 3.133351e-01 6.066533e-02 9.736571e-04 8.645800e-13 1.456637e-29 10.18699898 0.43417860 1.912747e-03 0.94597533 0.11944218 NA NA NA 1.632688e-12 0.7631057 0.45299921 -6.2256851 1 0.6432521 0.8159942 -0.5627171 0.5280034 NA 0.33046723 0.316989790 -0.318279187 0.6432521 1 0.2086992 -0.17731664 0.6340771 NA 0.132349677 0.1239141878 -0.1202032974 0.8159942 0.2086992 1 -0.6595454 0.2081355 NA 0.112729913 0.110584947 -0.117285096 -0.5627171 -0.17731664 -0.6595454 1 -0.14546316 NA -0.081618261 -0.069472436 0.103110184 0.5280034 0.6340771 0.2081355 -0.14546316 1 NA 0.166397835 0.155218672 -0.1538768490 NA NA NA NA NA NA NA NA NA 0.33046723 0.132349677 0.112729913 -0.081618261 0.166397835 NA 1 0.953377434 -0.93596067 0.316989790 0.1239141878 0.110584947 -0.069472436 0.155218672 NA 0.953377434 1 -0.8268755 -0.318279187 -0.1202032974 -0.117285096 0.103110184 -0.1538768490 NA -0.93596067 -0.8268755 1 both 0.5037632 0.2208915 0.12192674 0.011952191 0.13281919 0.10653753 0.1700953 0.02589641 0.1217885 0.9212439 0.39282466 0.013396052 0.143303230 0.5172937 -0.034587391 1993 503 501 1671 1326 0.5855494 0.05685716 0.0876808187 -7.0 40.0 47.0 0.03826268 4.783436e-01 0.0000000000 0.03576979 5.659883e-01 2.9708627 0.3898645 0.6477056 0.4068956 0.4064225 0.3945225 100 50 0.3226761 0.4397208 0.5621709 0.5745791 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.168590065 0.01906673 0.5558947 0.6383764 0.3155080 0.8814198 0.8529478 0.9812834 0.19622965 0.17554479 0.7316044 0.8958705 0.8271271 0.3007333 0.20022307 0.51296255 0.44066108 0.33418082 0.19257697 0.4004014 0.6255144 0.3691429 -3.00 0.0 69.75 NA NA NA 1360 Lactococcus lactis subsp. lactis 0.8081165 0.6898715 0.8076753 0.6323738 0.4703065 1.625167e-01 4.031289e-01 0.322798605 0.115912487 0.30323609 0.1447172416 6.893057e-23 3.357235e-25 1.000000e+00 1.332102e-24 1.187413e-07 3.697045e-11 8.520173e-04 1.809036e-02 3.716384e-17 3.674675e-06 1.000000e+00 4.295293e-03 7.364737e-01 4.782992e-02 8.780734e-03 1.233320e-01 5.745039e-08 6.893057e-23 0.47232978 0.50322631 3.674675e-06 0.46237018 0.44732565 NA NA NA 7.787741e-07 0.7025572 0.41431261 -0.8868472 1 0.8215532 0.7194744 -0.7201291 0.6840024 NA 0.31866817 0.276867321 -0.319280409 0.8215532 1 0.3153011 -0.31841450 0.7699732 NA 0.187785172 0.1653271513 -0.1789175209 0.7194744 0.3153011 1 -0.9932513 0.2403899 NA 0.089224604 0.061744419 -0.111792003 -0.7201291 -0.31841450 -0.9932513 1 -0.24092020 NA -0.089568340 -0.062586479 0.113057335 0.6840024 0.7699732 0.2403899 -0.24092020 1 NA 0.121120274 0.086279803 -0.1166491464 NA NA NA NA NA NA NA NA NA 0.31866817 0.187785172 0.089224604 -0.089568340 0.121120274 NA 1 0.891505900 -0.90820609 0.276867321 0.1653271513 0.061744419 -0.062586479 0.086279803 NA 0.891505900 1 -0.7809584 -0.319280409 -0.1789175209 -0.111792003 0.113057335 -0.1166491464 NA -0.90820609 -0.7809584 1 both 0.2381212 0.2189230 0.30638995 0.123853211 0.30564166 0.31192661 0.3577280 0.12614679 0.3131892 0.8132125 0.27931717 0.066819138 0.224089742 0.5296935 -0.059387054 1831 218 218 1832 435 0.8809394 0.07580894 0.2196883815 15.5 87.0 71.5 0.06015346 4.905522e-01 0.0000000000 0.05370357 6.368953e-01 2.6428051 0.4451120 0.7698229 0.4569562 0.4401966 0.4545072 100 50 0.5071705 0.4098480 0.6003648 0.6172135 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.057891862 0.02839978 0.5390225 0.6310684 0.4620253 0.8025545 0.8037898 0.9620253 0.08617483 0.08715596 0.8615514 0.8179530 0.7825467 0.6230724 0.58932244 0.44996868 0.28555936 0.29007362 0.17492333 0.3238667 0.4652406 0.2614173 2.00 28.0 111.00 NA NA NA 1423 Bacillus subtilis 0.7436770 0.6187570 0.7344358 0.5170417 0.4131408 5.328469e-01 9.320091e-01 0.219179633 0.054979282 0.21471726 0.0494175143 4.233887e-91 1.717458e-88 2.241477e-60 9.629619e-86 6.922846e-37 5.635680e-41 1.733883e-06 7.296817e-06 1.920072e-40 8.838385e-06 2.840304e-07 2.827143e-02 3.089033e-01 3.770857e-01 2.531711e-03 7.820539e-04 5.781687e-11 4.233887e-91 0.81207475 1.03443966 5.371694e-01 -0.20469586 -0.23227079 2.840304e-07 0.538351936 0.412117824 1.071663e-10 0.5859410 0.37908467 -0.7449972 1 0.9061524 0.6398174 -0.6391235 0.7826454 0.75698822 0.15210164 0.145810868 -0.147761871 0.9061524 1 0.3214200 -0.32851852 0.8211767 0.82996090 0.078180240 0.0742313581 -0.0721559757 0.6398174 0.3214200 1 -0.9266037 0.2905874 0.27175242 0.058545735 0.052956541 -0.080006741 -0.6391235 -0.32851852 -0.9266037 1 -0.30100663 -0.27855917 -0.055750382 -0.055097623 0.077300118 0.7826454 0.8211767 0.2905874 -0.30100663 1 0.6403406 0.100431489 0.103076805 -0.0789427402 0.75698822 0.82996090 0.27175242 -0.27855917 0.6403406 1 0.051245285 0.048865170 -0.0349245457 0.15210164 0.078180240 0.058545735 -0.055750382 0.100431489 0.051245285 1 0.859286709 -0.85315035 0.145810868 0.0742313581 0.052956541 -0.055097623 0.103076805 0.048865170 0.859286709 1 -0.7946115 -0.147761871 -0.0721559757 -0.080006741 0.077300118 -0.0789427402 -0.0349245457 -0.85315035 -0.7946115 1 both 0.3615894 0.2980123 0.30397351 0.051282051 0.33293509 0.16110020 0.5509934 0.32417582 0.4907588 0.6547226 0.11668639 0.190245578 0.170502222 0.5868592 -0.173718479 3020 546 546 3058 1054 0.8314570 0.03388392 0.7161178831 -3.0 58.0 61.0 0.22512419 0.000000e+00 0.0404187852 0.17183489 2.798417e-11 4.1305169 0.3867550 0.6465615 0.3668719 0.3854305 0.3678036 150 75 0.7251787 0.4186547 0.7433321 0.7449208 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.068211921 0.01788079 0.5382238 0.5865870 0.5346154 0.6551789 0.7089736 0.6115385 0.08283552 0.10216110 0.7180505 0.7429763 0.7504632 0.6427563 0.45928356 0.35735594 0.33756967 0.24203341 0.13047709 0.3956954 0.6034858 0.3049477 0.00 16.0 60.75 NA NA NA 1488 Clostridium acetobutylicum 0.7903050 0.6685540 0.7739651 0.5588652 0.4109153 8.688103e-02 2.137110e-93 0.310918436 0.004637576 0.26639073 -0.0797500141 1.120210e-58 1.002472e-58 3.300102e-26 1.550727e-55 2.065656e-19 3.376347e-24 4.060124e-13 1.070776e-15 2.636064e-24 1.633037e-05 2.575961e-03 3.735714e-02 3.024191e-01 3.058678e-01 3.734698e-09 1.574702e-11 1.181044e-07 1.120210e-58 0.44174181 0.48865420 2.041258e-03 0.52734417 0.46637671 2.575961e-03 0.046060179 0.020537881 1.373808e-07 0.6164675 0.32687750 -0.7701215 1 0.8637124 0.7245604 -0.7232579 0.7311162 0.52873851 0.16978915 0.148299519 -0.162100186 0.8637124 1 0.3417437 -0.34362173 0.8071835 0.60920283 0.071467148 0.0697294900 -0.0498368058 0.7245604 0.3417437 1 -0.9698121 0.2914173 0.19196905 0.076711890 0.045682475 -0.100685125 -0.7232579 -0.34362173 -0.9698121 1 -0.29326959 -0.18497390 -0.084023933 -0.048293505 0.104658647 0.7311162 0.8071835 0.2914173 -0.29326959 1 0.4991488 0.068776340 0.083798035 -0.0703180571 0.52873851 0.60920283 0.19196905 -0.18497390 0.4991488 1 0.025289595 0.017359977 -0.0003396862 0.16978915 0.071467148 0.076711890 -0.084023933 0.068776340 0.025289595 1 0.743767175 -0.77468937 0.148299519 0.0697294900 0.045682475 -0.048293505 0.083798035 0.017359977 0.743767175 1 -0.7842221 -0.162100186 -0.0498368058 -0.100685125 0.104658647 -0.0703180571 -0.0003396862 -0.77468937 -0.7842221 1 both 0.2920479 0.2543788 0.26530612 0.043373494 0.27554304 0.19382022 0.3729768 0.12409639 0.3167211 0.8040005 0.17709364 0.073103279 0.226770219 0.5890847 -0.178169352 2842 415 415 2902 770 0.8747361 0.04391107 0.5854892596 -4.0 57.0 61.0 0.08960290 1.347105e-02 0.0000000000 0.08172282 3.122984e-02 2.0213825 0.3529205 0.7178915 0.4737959 0.3835327 0.4715125 142 71 0.6593985 0.4826735 0.6898236 0.6992398 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.030260380 0.01794511 0.5449530 0.6690934 0.5985401 0.7188458 0.8104118 0.8467153 0.04666130 0.05898876 0.7765016 0.7874230 0.7917562 0.6551342 0.49296995 0.36874139 0.22493611 0.16593942 0.10813858 0.4018297 0.6220159 0.3223180 2.00 17.0 43.00 NA NA NA 1502 Clostridium perfringens 0.8300752 0.7178993 0.7699248 0.4211455 0.2395323 3.899029e-08 3.139072e-17 0.101340573 -0.033460547 0.16906929 -0.0608611627 2.117548e-61 2.337017e-57 8.615834e-35 2.083461e-61 2.801373e-22 3.548723e-29 5.835668e-06 6.106086e-07 8.335662e-29 3.692192e-02 6.118660e-05 1.037219e-02 2.915979e-01 9.374422e-01 4.013283e-04 6.698948e-05 5.729496e-08 2.117548e-61 1.33851506 1.77111611 2.557947e-02 -0.71810942 -0.82779274 6.118660e-05 0.870001117 0.561138030 2.108718e-08 0.6409628 0.49364336 -1.3083284 1 0.9030865 0.7247574 -0.7220841 0.7999853 0.64357695 0.17455508 0.163152238 -0.149070158 0.9030865 1 0.4189610 -0.41596606 0.8909507 0.70189146 0.097434645 0.0874278335 -0.0836127819 0.7247574 0.4189610 1 -0.9866015 0.3740893 0.31491595 0.088751503 0.095560151 -0.100160643 -0.7220841 -0.41596606 -0.9866015 1 -0.36989551 -0.30760492 -0.091493796 -0.097535174 0.104294150 0.7999853 0.8909507 0.3740893 -0.36989551 1 0.5652737 0.090388027 0.083951311 -0.0791629911 0.64357695 0.70189146 0.31491595 -0.30760492 0.5652737 1 0.068771500 0.049424926 -0.0476790220 0.17455508 0.097434645 0.088751503 -0.091493796 0.090388027 0.068771500 1 0.855402620 -0.72299179 0.163152238 0.0874278335 0.095560151 -0.097535174 0.083951311 0.049424926 0.855402620 1 -0.7980464 -0.149070158 -0.0836127819 -0.100160643 0.104294150 -0.0791629911 -0.0476790220 -0.72299179 -0.7980464 1 both 0.2988281 0.3028498 0.32373047 0.045751634 0.32930037 0.25170068 0.5756836 0.32026144 0.5169173 0.5769404 -0.21823994 0.243548466 0.088586662 0.6254332 -0.250866463 2048 306 306 2208 452 0.9282227 0.08395868 0.2912540536 4.0 98.0 94.0 0.13199641 1.722213e-02 0.0226895210 0.07759969 3.838881e-01 2.1054372 0.3715820 0.6791918 0.9194074 0.3715820 0.9236681 102 51 0.8573393 0.5017265 0.8706236 0.8710223 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.009277344 0.01513672 0.4768805 0.7258814 0.6600000 0.6108398 0.8236027 0.7600000 0.02314571 0.04081633 0.8074094 0.8132752 0.8155235 0.7520164 0.64633953 0.42462541 0.34616513 0.28732077 0.17673976 0.3149414 0.5218703 0.2158845 5.00 22.0 83.50 NA NA NA 1642 Listeria innocua 0.8025606 0.6830859 0.8045822 0.6320065 0.4764871 4.709199e-05 1.310711e-01 0.237267619 0.130346400 0.22448071 0.1196577912 2.801656e-50 4.383799e-50 1.197368e-02 4.243136e-55 1.978179e-16 6.679473e-24 8.822730e-03 3.855192e-03 9.531017e-25 5.199530e-02 8.611083e-10 2.882809e-07 7.357592e-01 8.798531e-01 2.840373e-01 1.913108e-01 1.196320e-07 2.801656e-50 0.61122650 0.60867002 3.948957e-02 0.47911853 0.49681388 8.611083e-10 2.173599582 0.294960245 2.418993e-07 0.6291566 0.41007402 -4.0650681 1 0.9298447 0.6369895 -0.6357314 0.7747140 -0.08376882 0.21350394 0.193381028 -0.219718005 0.9298447 1 0.3566807 -0.35652842 0.8245321 -0.07883168 0.118618954 0.1108421125 -0.1182122567 0.6369895 0.3566807 1 -0.9806890 0.3008847 0.04951103 0.098150986 0.072763175 -0.137249593 -0.6357314 -0.35652842 -0.9806890 1 -0.29878664 -0.04315124 -0.101914264 -0.082329492 0.142831458 0.7747140 0.8245321 0.3008847 -0.29878664 1 0.3291859 0.111339769 0.099447670 -0.1184402300 -0.08376882 -0.07883168 0.04951103 -0.04315124 0.3291859 1 0.003400822 -0.015716595 -0.0197879967 0.21350394 0.118618954 0.098150986 -0.101914264 0.111339769 0.003400822 1 0.852140585 -0.85146579 0.193381028 0.1108421125 0.072763175 -0.082329492 0.099447670 -0.015716595 0.852140585 1 -0.7933219 -0.219718005 -0.1182122567 -0.137249593 0.142831458 -0.1184402300 -0.0197879967 -0.85146579 -0.7933219 1 both 0.2428811 0.2861801 0.43509213 0.172413793 0.44715447 0.35016835 0.4024288 0.10344828 0.3440027 0.8654259 0.21455983 0.054156510 0.294115791 0.5235129 -0.047025854 2388 290 290 2382 586 0.8756281 0.05558696 0.3976970701 -3.0 31.0 34.0 0.16261129 2.128331e-06 0.1307814539 0.10138690 9.529568e-03 2.0152848 0.4752931 0.8307343 0.4954944 0.4702680 0.4739495 118 59 0.6385219 0.4699388 0.7422729 0.7457158 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.077051926 0.03056951 0.6495964 0.6781044 0.7976654 0.7957562 0.8037999 0.8249027 0.10856050 0.10101010 0.7653956 0.7890031 0.7884086 0.6013678 0.43474403 0.25793515 0.23138128 0.19555418 0.14903602 0.4782245 0.6304139 0.3610082 -3.00 13.0 31.00 NA NA NA 1769 Mycobacterium leprae 0.6660436 0.5551410 0.6884735 0.4840366 0.4353380 1.035793e-01 2.526635e-02 0.354674601 0.193828091 0.28451738 0.0996632571 3.265367e-30 1.209904e-30 1.873007e-16 5.381628e-33 3.205659e-16 2.151975e-14 1.435365e-04 6.761861e-05 1.315474e-27 1.689968e-03 2.392910e-03 3.606969e-04 7.972914e-01 4.407117e-01 1.505090e-03 1.054431e-03 1.245109e-10 3.265367e-30 0.40338488 0.39251277 1.332072e-01 0.23800041 0.20153426 2.392910e-03 0.266285524 0.133155389 6.578049e-10 0.6911725 0.55647298 -0.4886077 1 0.9459146 0.6394594 -0.6121725 0.7362171 0.62910329 0.20096625 0.133113366 -0.190766632 0.9459146 1 0.3908437 -0.37475805 0.7647445 0.60758021 0.118693287 0.0844683226 -0.1260483227 0.6394594 0.3908437 1 -0.9003687 0.3227297 0.37923866 0.090957294 0.011205400 -0.071759723 -0.6121725 -0.37475805 -0.9003687 1 -0.30947576 -0.43898358 -0.075326223 -0.007495385 0.071011039 0.7362171 0.7647445 0.3227297 -0.30947576 1 0.4624128 0.050769649 0.078843938 -0.0788694708 0.62910329 0.60758021 0.37923866 -0.43898358 0.4624128 1 0.106370100 0.049353134 -0.0998084576 0.20096625 0.118693287 0.090957294 -0.075326223 0.050769649 0.106370100 1 0.462440595 -0.60881060 0.133113366 0.0844683226 0.011205400 -0.007495385 0.078843938 0.049353134 0.462440595 1 -0.7787136 -0.190766632 -0.1260483227 -0.071759723 0.071011039 -0.0788694708 -0.0998084576 -0.60881060 -0.7787136 1 both 0.4524887 0.2985478 0.29411765 0.080000000 0.33985330 0.16376307 0.5402715 0.29200000 0.4629283 0.6948177 0.13039825 0.164881312 0.210508869 0.5646620 -0.129324057 1105 250 250 1069 536 0.7402715 0.04830342 0.7044536578 -2.5 71.5 74.0 0.19533493 1.818964e-07 0.0613573513 0.18929487 4.881368e-07 5.4272589 0.3864253 0.6093757 0.4170980 0.3819005 0.4156353 100 50 0.6509788 0.3485622 0.6946560 0.6986388 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.161085973 0.02533937 0.5974752 0.6629223 0.6262136 0.7125287 0.7875680 0.6844660 0.19193154 0.17073171 0.6567552 0.7410038 0.7446296 0.5937423 0.55467344 0.44749310 0.32398256 0.28044116 0.24592356 0.3656109 0.5815385 0.2756410 -3.00 7.0 51.50 NA NA NA 2097 Mycoplasma genitalium 0.8202479 0.7051175 0.8388430 0.7052257 0.5406105 2.448042e-08 5.391728e-04 0.548404448 0.432154332 0.61054389 0.4173334375 5.355596e-09 8.992036e-10 1.208040e-06 1.366948e-08 2.995731e-01 8.485912e-02 8.084014e-02 1.219124e-02 8.453147e-06 3.336536e-04 8.705009e-03 2.142994e-01 1.837060e-02 6.155933e-02 4.023219e-01 9.905229e-02 2.287938e-02 5.355596e-09 3.59357984 0.58020651 1.341743e-02 1.02055583 0.50272957 8.705009e-03 0.181767062 0.051921426 6.892418e-02 0.5660558 0.38386380 -5.7923976 1 0.9233526 0.6979721 -0.6217038 0.7851185 0.68896567 0.29331033 0.243953527 -0.202819153 0.9233526 1 0.4136301 -0.35364913 0.8314978 0.73358986 0.235514471 0.1970532375 -0.1725485664 0.6979721 0.4136301 1 -0.8534608 0.3650921 0.36039755 0.125794673 0.111832705 -0.080137885 -0.6217038 -0.35364913 -0.8534608 1 -0.29364828 -0.33587960 -0.106435710 -0.100532554 0.111463378 0.7851185 0.8314978 0.3650921 -0.29364828 1 0.5374449 0.294561455 0.250194429 -0.1818646805 0.68896567 0.73358986 0.36039755 -0.33587960 0.5374449 1 0.195806903 0.149697181 -0.1777925837 0.29331033 0.235514471 0.125794673 -0.106435710 0.294561455 0.195806903 1 0.791769221 -0.63096494 0.243953527 0.1970532375 0.111832705 -0.100532554 0.250194429 0.149697181 0.791769221 1 -0.6128847 -0.202819153 -0.1725485664 -0.080137885 0.111463378 -0.1818646805 -0.1777925837 -0.63096494 -0.6128847 1 both 0.1921182 0.3005521 0.33990148 0.051282051 0.35014006 0.26530612 0.4605911 0.12820513 0.4070248 0.8721294 0.25753285 0.058896083 0.342798966 0.4593895 0.081221100 406 39 39 397 87 0.8793103 0.18727491 0.0973738236 2.0 4.0 2.0 0.18287315 1.120447e-01 0.0000000000 0.13045218 4.558159e-01 4.9564172 0.5788177 0.8707446 0.6335935 0.5788177 0.6162837 100 50 0.5693962 0.4999004 0.7339883 0.7348838 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.000000000 0.10098522 NA 0.7863187 0.9512195 NA 0.9145771 0.9756098 0.10644258 0.06122449 0.7853641 0.8270380 0.8351083 0.2544003 0.18387879 0.16178644 0.16221906 0.16904349 0.17699794 0.6699507 0.8985507 0.5522388 -7.00 0.0 4.50 NA NA NA 2104 Mycoplasma pneumoniae 0.8011611 0.6813960 0.8200290 0.6784312 0.5306232 1.158798e-01 4.688636e-03 0.304538826 0.143428621 0.23123778 0.1888397073 1.809254e-10 1.356861e-09 9.298040e-06 2.683912e-08 7.941279e-02 6.926391e-02 2.303643e-02 9.933682e-02 2.131281e-06 7.541771e-03 1.101825e-01 7.434002e-01 3.199388e-01 5.489129e-02 1.459073e-01 1.784992e-01 1.918128e-02 1.809254e-10 6.47356615 0.63045075 3.105741e-02 1.05141942 0.44285085 1.101825e-01 -0.208085102 -0.055228589 2.825535e-02 0.6109631 0.36236555 -8.8611554 1 0.7617315 0.9019139 -0.8429872 0.7076225 0.59840213 0.30918213 -0.155771586 0.022020424 0.7617315 1 0.4805009 -0.41440816 0.7575906 0.67876291 0.160079100 -0.0462814037 -0.0468410471 0.9019139 0.4805009 1 -0.8936937 0.4591622 0.46201926 0.203999595 -0.149994341 0.047522598 -0.8429872 -0.41440816 -0.8936937 1 -0.40780090 -0.39231197 -0.218247854 0.144772846 -0.031326735 0.7076225 0.7575906 0.4591622 -0.40780090 1 0.5260941 0.142226447 -0.048481914 -0.0573650781 0.59840213 0.67876291 0.46201926 -0.39231197 0.5260941 1 0.149763309 -0.114672350 0.0124622712 0.30918213 0.160079100 0.203999595 -0.218247854 0.142226447 0.149763309 1 -0.289192538 0.13549991 -0.155771586 -0.0462814037 -0.149994341 0.144772846 -0.048481914 -0.114672350 -0.289192538 1 -0.7777303 0.022020424 -0.0468410471 0.047522598 -0.031326735 -0.0573650781 0.0124622712 0.13549991 -0.7777303 1 both 0.2194690 0.2492748 0.23893805 0.024193548 0.24130879 0.22368421 0.3628319 0.10483871 0.3164006 0.8643756 0.34056974 0.049208860 0.264414139 0.4693768 0.061246371 565 62 62 552 137 0.8654867 0.10800775 0.4267432727 1.5 10.0 8.5 0.09996233 5.267963e-01 0.0626706302 0.08118071 7.788883e-01 3.8930162 0.5097345 0.8270867 0.3534682 0.5008850 0.3990375 100 50 0.4991174 0.7674964 0.8302712 0.8320975 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.000000000 0.09911504 NA 0.7008451 0.8035714 NA 0.9687596 1.0000000 0.10633947 0.05263158 0.9468740 0.9623305 0.9661914 0.3065846 0.19204133 0.09011086 0.04354580 0.02856038 0.02091928 0.5185841 0.8814815 0.4046512 -10.00 0.0 3.00 NA NA NA 2107 Mycoplasma pulmonis 0.6521739 0.5463138 0.7570332 0.6500634 0.6135276 7.807420e-01 3.701452e-03 0.187800053 0.047058361 0.22073295 0.0115782455 8.028900e-15 9.860636e-16 1.000000e+00 9.610102e-15 6.843436e-06 1.859102e-07 9.136439e-03 1.400324e-03 1.753035e-09 4.058848e-02 1.000000e+00 3.680534e-05 6.434448e-01 4.817342e-01 2.222368e-02 2.331182e-03 1.245627e-03 8.028900e-15 0.48771067 0.04645840 4.058848e-02 8.18505967 0.93808560 NA NA NA 3.978422e-03 0.5804630 0.35049225 -7.4109799 1 0.7113548 0.8822695 -0.8244737 0.7103033 NA 0.18849400 0.102316188 -0.082728708 0.7113548 1 0.3707099 -0.33371972 0.7831589 NA 0.072575983 0.0381650029 -0.0271614663 0.8822695 0.3707099 1 -0.8913611 0.4004089 NA 0.128898465 0.063657512 -0.055219435 -0.8244737 -0.33371972 -0.8913611 1 -0.35698732 NA -0.124796840 -0.056538568 0.050131966 0.7103033 0.7831589 0.4004089 -0.35698732 1 NA 0.036041327 0.034637186 -0.0045645457 NA NA NA NA NA NA NA NA NA 0.18849400 0.072575983 0.128898465 -0.124796840 0.036041327 NA 1 0.455687619 -0.29135430 0.102316188 0.0381650029 0.063657512 -0.056538568 0.034637186 NA 0.455687619 1 -0.7829470 -0.082728708 -0.0271614663 -0.055219435 0.050131966 -0.0045645457 NA -0.29135430 -0.7829470 1 both 0.3209459 0.2617841 0.23479730 0.021052632 0.22463768 0.25842697 0.3868243 0.15263158 0.3299233 0.8475073 0.46592057 0.058987894 0.268848536 0.3864724 0.227055180 592 96 94 510 272 0.6993243 0.04184986 0.9812816230 7.5 21.0 13.5 0.09930522 1.715971e-01 -0.0401844954 0.04209412 9.801309e-01 -0.7926115 0.5658784 0.7329114 0.3918332 0.5709459 0.3756488 100 50 0.3700991 0.6331507 0.7109945 0.7149003 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.000000000 0.07770270 NA 0.7636167 0.6956522 NA 0.9690961 1.0000000 0.07729469 0.07865169 0.8959111 0.9169981 0.9275019 0.4856309 0.36912440 0.15864286 0.08684460 0.07353387 0.06905444 0.4442568 0.6978417 0.3664459 -7.00 0.0 9.00 NA NA NA 2130 Ureaplasma urealyticum 0.7100977 0.5882821 0.8175896 0.7406737 0.6812133 3.537185e-01 3.113148e-05 0.201804932 0.074747236 0.19551962 0.1115688659 2.781663e-11 8.721046e-11 1.000000e+00 2.784613e-11 2.454836e-04 1.290977e-04 4.389262e-02 1.265904e-02 3.842767e-06 1.179426e-01 1.000000e+00 9.487646e-01 4.629031e-01 4.420245e-01 4.392266e-02 2.496459e-02 2.897240e-02 2.781663e-11 0.47138969 0.45938972 1.179426e-01 3.47541818 0.55602755 NA NA NA 2.468883e-02 0.6219182 0.35466758 -4.4229606 1 0.7541154 0.8041983 -0.6382557 0.7543363 NA 0.11240864 -0.074665781 0.044836938 0.7541154 1 0.3081421 -0.27171300 0.8564196 NA 0.009243229 0.0318097724 -0.0132948081 0.8041983 0.3081421 1 -0.6100628 0.3402781 NA 0.035630453 -0.038776745 -0.009813379 -0.6382557 -0.27171300 -0.6100628 1 -0.25458464 NA -0.059323908 0.038869720 -0.006624547 0.7543363 0.8564196 0.3402781 -0.25458464 1 NA 0.002078172 0.004819392 -0.0100443115 NA NA NA NA NA NA NA NA NA 0.11240864 0.009243229 0.035630453 -0.059323908 0.002078172 NA 1 -0.697865153 0.64830437 -0.074665781 0.0318097724 -0.038776745 0.038869720 0.004819392 NA -0.697865153 1 -0.8134191 0.044836938 -0.0132948081 -0.009813379 -0.006624547 -0.0100443115 NA 0.64830437 -0.8134191 1 both 0.2231076 0.2553694 0.31673307 0.044642857 0.34036939 0.24390244 0.3047809 0.03571429 0.2557003 0.9626445 0.55783514 0.015239044 0.274302789 0.3226405 0.354718986 502 56 56 436 178 0.7549801 0.06484759 0.8296905150 3.0 22.0 19.0 0.09425746 3.813580e-01 0.0000000000 0.09646695 3.531785e-01 4.7058479 0.6872510 0.8913749 0.5267649 0.6832669 0.5205037 100 50 0.3926926 0.6862403 0.7312867 0.7321145 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.000000000 0.04183267 NA 0.7095039 0.9523810 NA 0.8377357 1.0000000 0.03430079 0.06504065 0.6888099 0.6973069 0.7091467 0.8293135 0.50752399 0.08633932 0.05327283 0.05136167 0.05733478 0.5159363 0.7547170 0.4052478 1.75 9.5 26.25 NA NA NA 2190 Methanocaldococcus jannaschii 0.5604396 0.5073059 0.7073453 0.5802098 0.5739932 7.614014e-01 4.879028e-01 0.234101560 0.140415639 0.23500910 0.0304750451 6.188942e-17 2.751989e-22 1.000000e+00 7.063245e-17 2.019306e-01 4.627061e-05 1.875516e-05 9.090078e-05 8.143388e-18 7.426525e-07 1.000000e+00 3.243109e-01 1.710603e-03 2.476386e-01 7.536619e-05 3.235420e-04 2.667436e-09 6.188942e-17 -0.11055998 -0.09672505 7.426525e-07 1.12551475 0.64814367 NA NA NA 7.732336e-08 0.7357163 0.43312269 -0.6256783 1 0.8582737 0.4787001 -0.1677652 0.6072264 NA 0.33634556 0.150481586 -0.080286551 0.8582737 1 0.1020309 -0.10435719 0.6522833 NA 0.151550892 0.1029652578 -0.0685845394 0.4787001 0.1020309 1 -0.1584090 0.1144148 NA 0.070795526 0.020219268 -0.008184330 -0.1677652 -0.10435719 -0.1584090 1 -0.04789598 NA -0.084052460 -0.094672132 0.117474698 0.6072264 0.6522833 0.1144148 -0.04789598 1 NA 0.070120984 0.039247029 -0.0362537902 NA NA NA NA NA NA NA NA NA 0.33634556 0.151550892 0.070795526 -0.084052460 0.070120984 NA 1 0.257943396 -0.04656570 0.150481586 0.1029652578 0.020219268 -0.094672132 0.039247029 NA 0.257943396 1 -0.7625993 -0.080286551 -0.0685845394 -0.008184330 0.117474698 -0.0362537902 NA -0.04656570 -0.7625993 1 both 0.4137367 0.2340506 0.16189697 0.029644269 0.14825175 0.18110236 0.2199509 0.04940711 0.1700405 0.9043070 0.48085435 0.021047769 0.177855402 0.4260068 0.147986308 1223 253 253 969 760 0.5846280 0.06566544 0.1543498174 10.0 40.0 30.0 0.03453554 8.706184e-01 0.0000000000 0.04139640 6.888250e-01 -1.0420436 0.6148814 0.7047458 0.5147022 0.6091578 0.5198346 100 50 0.3474027 0.2112634 0.3912344 0.4114803 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.049877351 0.01717089 0.5813817 0.5842540 0.7317073 0.5194280 0.5608441 0.4634146 0.07692308 0.05314961 0.4184334 0.4365039 0.4547300 0.6877631 0.65696857 0.49138992 0.45084473 0.40325989 0.33234776 0.4341783 0.4898990 0.4234146 10.25 29.0 81.50 NA NA NA 2234 Archaeoglobus fulgidus 0.5504132 0.5050830 0.7049587 0.5772034 0.5728804 1.075353e-02 3.209514e-01 0.422277190 0.148893504 0.35016233 0.0897002185 4.603523e-41 4.171601e-45 1.000000e+00 5.764153e-42 4.702373e-03 1.014563e-16 2.217569e-09 1.433853e-07 5.030135e-20 1.496214e-05 1.000000e+00 9.527879e-05 3.236237e-04 6.987253e-01 3.605863e-07 1.543778e-05 1.186737e-06 4.603523e-41 -0.10383328 -0.13460420 1.496214e-05 1.03160708 1.04698439 NA NA NA 4.434035e-06 0.5922087 0.29818072 -0.4383119 1 0.6496633 0.8670196 -0.7343643 0.6590271 NA 0.26387277 0.143635189 -0.192052092 0.6496633 1 0.2874108 -0.23239824 0.7366622 NA 0.077580065 0.1224083595 -0.0991866730 0.8670196 0.2874108 1 -0.7413131 0.3583865 NA 0.135280964 0.043769459 -0.082111999 -0.7343643 -0.23239824 -0.7413131 1 -0.27649206 NA -0.152013740 -0.010826871 0.080235435 0.6590271 0.7366622 0.3583865 -0.27649206 1 NA 0.092415489 0.073232928 -0.0724033073 NA NA NA NA NA NA NA NA NA 0.26387277 0.077580065 0.135280964 -0.152013740 0.092415489 NA 1 0.555352696 -0.71588365 0.143635189 0.1224083595 0.043769459 -0.010826871 0.073232928 NA 0.555352696 1 -0.7978116 -0.192052092 -0.0991866730 -0.082111999 0.080235435 -0.0724033073 NA -0.71588365 -0.7978116 1 both 0.4185229 0.2604181 0.20457210 0.021008403 0.20636550 0.20218579 0.2731536 0.05882353 0.2099174 0.9080199 0.44693275 0.025124685 0.222904206 0.4271196 0.145760723 1706 357 357 1332 1088 0.5709261 0.03549949 0.6681060268 1.5 8.5 7.0 0.02041326 9.949652e-01 0.0000000000 0.01996443 9.962697e-01 0.1993229 0.5662368 0.6714159 0.4641668 0.5644783 0.4528641 100 50 0.3103111 0.7539336 0.7823808 0.7872928 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.165298945 0.02989449 0.6403518 0.6927967 0.7717718 0.9157649 0.9534010 0.9969970 0.20328542 0.18442623 0.8344500 0.9003674 0.9374483 0.2362700 0.05842242 0.05124488 0.04292244 0.03860318 0.03128566 0.5357562 0.8338109 0.4591010 -3.75 -3.0 5.00 NA NA NA 2287 Sulfolobus solfataricus 0.5468593 0.5043916 0.6331878 0.4143326 0.4104231 2.504881e-02 1.238029e-01 0.429645539 0.317780368 0.42721871 0.3204345476 9.492095e-24 1.568968e-32 1.447676e-12 6.145918e-17 2.859507e-10 5.643192e-16 5.119192e-04 2.726116e-04 6.046959e-23 1.921060e-10 2.536043e-05 6.920000e-01 2.118155e-01 5.806707e-05 4.810136e-03 3.322743e-03 8.759761e-12 9.492095e-24 -0.08371186 -0.06094753 8.995083e-07 1.03225113 0.53694701 2.536043e-05 -0.174996963 -0.048284211 6.462107e-11 0.7314755 0.30870798 -0.2870670 1 0.7389055 0.8610395 -0.8340278 0.5797013 0.51536291 0.24168963 0.145653448 -0.149144097 0.7389055 1 0.3910280 -0.37145675 0.6279986 0.42235193 0.104605554 0.0796953781 -0.0617759004 0.8610395 0.3910280 1 -0.9277497 0.3458710 0.37655193 0.114465949 0.035123807 -0.082868148 -0.8340278 -0.37145675 -0.9277497 1 -0.29764708 -0.35738234 -0.100448055 -0.042974115 0.085734876 0.5797013 0.6279986 0.3458710 -0.29764708 1 0.3388350 0.059281899 0.046970884 -0.0072732309 0.51536291 0.42235193 0.37655193 -0.35738234 0.3388350 1 0.078840017 0.034813880 -0.0073925665 0.24168963 0.104605554 0.114465949 -0.100448055 0.059281899 0.078840017 1 0.548891118 -0.37109420 0.145653448 0.0796953781 0.035123807 -0.042974115 0.046970884 0.034813880 0.548891118 1 -0.7385627 -0.149144097 -0.0617759004 -0.082868148 0.085734876 -0.0072732309 -0.0073925665 -0.37109420 -0.7385627 1 both 0.5793103 0.2303629 0.15384615 0.040293040 0.14061055 0.17164179 0.5777188 0.43864469 0.5267047 0.5523519 0.21625180 0.258614761 0.060489310 0.5895769 -0.179153734 1885 546 546 1628 1349 0.5734748 0.02857245 0.8458827320 -3.0 22.0 25.0 0.04851322 2.279464e-01 0.0000000000 0.03833860 5.068502e-01 -0.2980576 0.4636605 0.5575125 0.5454292 0.4472149 0.5407047 100 50 0.5227919 0.5650526 0.6627979 0.6744409 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.111405836 0.01379310 0.5308121 0.4992953 0.5932203 0.7802417 0.7457099 0.9110169 0.13228492 0.11567164 0.8527525 0.8344721 0.8246759 0.5991357 0.38395629 0.19507389 0.14727829 0.12002913 0.08277443 0.4228117 0.7655172 0.3605016 -7.50 -3.0 3.00 NA NA NA 2303 Thermoplasma acidophilum 0.5951417 0.5181039 0.6329285 0.3923418 0.3764669 1.886644e-01 1.940852e-01 0.555200659 0.462697305 0.43383416 0.3353985418 2.094693e-29 1.002351e-31 2.429009e-05 4.365665e-31 1.558679e-04 2.477892e-12 5.789040e-05 8.360656e-05 2.138050e-23 3.073015e-04 8.305672e-03 5.432173e-04 7.608535e-01 1.391157e-01 1.867102e-04 6.344028e-04 4.686040e-09 2.094693e-29 0.23603132 0.30444635 1.089881e-02 0.61799961 0.45172954 8.305672e-03 0.266194814 0.043259183 5.341134e-08 0.6678463 0.45886956 -0.4266633 1 0.8097886 0.8692874 -0.8441917 0.6856737 0.49776804 0.17018700 0.042274226 -0.090130037 0.8097886 1 0.4749156 -0.46664570 0.7201764 0.56156126 0.088488378 -0.0276757064 0.0021707671 0.8692874 0.4749156 1 -0.9120561 0.4246560 0.39424016 0.125970356 0.023481812 -0.076841469 -0.8441917 -0.46664570 -0.9120561 1 -0.41817301 -0.36499394 -0.112056721 -0.023084383 0.077369891 0.6856737 0.7201764 0.4246560 -0.41817301 1 0.2381629 0.043457177 0.021366332 -0.0366937978 0.49776804 0.56156126 0.39424016 -0.36499394 0.2381629 1 0.146799261 -0.136078375 0.0656678091 0.17018700 0.088488378 0.125970356 -0.112056721 0.043457177 0.146799261 1 0.273559673 -0.38040908 0.042274226 -0.0276757064 0.023481812 -0.023084383 0.021366332 -0.136078375 0.273559673 1 -0.7671743 -0.090130037 0.0021707671 -0.076841469 0.077369891 -0.0366937978 0.0656678091 -0.38040908 -0.7671743 1 both 0.5799574 0.2993369 0.21641791 0.025735294 0.22167488 0.20668693 0.6204691 0.49632353 0.5748988 0.5012255 0.17250764 0.309474131 0.001520822 0.6235331 -0.247066127 938 272 272 882 600 0.6492537 0.06512245 0.3253192385 -9.0 39.0 48.0 0.06438878 3.386011e-01 0.0280189300 0.05331377 5.783373e-01 0.8861349 0.4562900 0.5644975 0.6802111 0.4520256 0.6782885 100 50 0.6894853 0.6599690 0.7600592 0.7637504 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.120469083 0.01705757 0.6054679 0.5178760 0.5426357 0.8886897 0.8708157 0.9922481 0.14778325 0.11854103 0.8904262 0.9304439 0.9332002 0.8075933 0.54540366 0.23535200 0.07262884 0.05268685 0.04136422 0.4072495 0.7832512 0.3034014 -3.00 0.0 7.50 NA NA NA 2336 Thermotoga maritima 0.5785791 0.5123494 0.7997847 0.7447595 0.7369844 8.180906e-01 2.234809e-01 0.336982887 0.129147126 0.26354363 0.1192856573 9.396648e-38 5.646187e-38 1.000000e+00 1.038810e-37 1.607752e-05 5.494532e-11 1.097157e-02 5.200488e-03 2.094479e-23 1.001458e-01 1.000000e+00 9.634544e-01 6.408222e-02 2.300019e-01 5.396001e-02 4.203463e-02 5.121840e-08 9.396648e-38 0.36682517 0.56467634 1.001458e-01 0.62466593 0.80424129 NA NA NA 6.982404e-08 0.6816589 0.58719680 -0.8412367 1 0.7072409 0.6690700 -0.3930404 0.7467748 NA 0.21641515 0.129373198 -0.167922389 0.7072409 1 0.1278362 -0.08882204 0.7918592 NA -0.013771499 0.0831404124 -0.0463150332 0.6690700 0.1278362 1 -0.4878806 0.1805376 NA 0.133419043 0.028410144 -0.101694749 -0.3930404 -0.08882204 -0.4878806 1 -0.10153949 NA -0.128680991 0.044838220 0.063368649 0.7467748 0.7918592 0.1805376 -0.10153949 1 NA 0.044145494 0.050962532 -0.0480972310 NA NA NA NA NA NA NA NA NA 0.21641515 -0.013771499 0.133419043 -0.128680991 0.044145494 NA 1 0.248561369 -0.36844208 0.129373198 0.0831404124 0.028410144 0.044838220 0.050962532 NA 0.248561369 1 -0.7953602 -0.167922389 -0.0463150332 -0.101694749 0.063368649 -0.0480972310 NA -0.36844208 -0.7953602 1 both 0.2503365 0.2736050 0.26379542 0.013440860 0.26576577 0.26086957 0.2624495 0.01344086 0.2125942 0.9865301 0.64818618 0.013122476 0.236204576 0.2726029 0.454794143 1486 186 186 1075 783 0.5975774 0.03190440 0.8601350348 1.0 4.0 3.0 0.05308988 2.661637e-01 0.0000000000 0.04036729 6.051764e-01 3.4130863 0.8048452 0.9317387 0.6532438 0.8034993 0.6448285 100 50 0.4735860 0.6325332 0.6731346 0.6874304 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.230148048 0.02288022 0.7593339 0.7639063 1.0000000 0.9318477 0.8751559 1.0000000 0.24211712 0.26923077 0.6678230 0.8296443 0.7149590 0.5027427 0.28154407 0.10346288 0.06879019 0.05453448 0.04428479 0.6998654 0.8316327 0.6526508 -3.00 0.5 13.00 NA NA NA 13773 Pyrobaculum aerophilum 0.5439539 0.5038639 0.6337812 0.4166293 0.4131681 4.758084e-02 1.047728e-01 0.250314619 0.153381208 0.27109708 0.1850902448 2.580957e-17 1.942335e-21 9.999932e-01 2.167088e-17 3.688466e-02 8.055061e-07 1.791708e-02 1.906590e-02 1.385876e-09 1.426228e-05 1.000000e+00 4.138076e-01 6.495948e-03 6.374457e-01 5.372065e-02 7.462462e-02 2.024610e-02 2.580957e-17 -0.12397997 -0.07798866 1.426228e-05 1.27411910 0.50709439 NA NA NA 2.854950e-02 0.4388912 0.11889992 -0.3029027 1 0.4882647 0.9303828 -0.6871749 0.4825565 NA 0.26521136 0.202116729 -0.240568193 0.4882647 1 0.2355579 -0.15777192 0.6509239 NA 0.075118554 0.0481313061 -0.0784258334 0.9303828 0.2355579 1 -0.7239252 0.3192539 NA 0.137743124 0.109852532 -0.135197338 -0.6871749 -0.15777192 -0.7239252 1 -0.22375265 NA -0.131470147 -0.084491678 0.133837379 0.4825565 0.6509239 0.3192539 -0.22375265 1 NA 0.079779879 0.048909719 -0.0865325184 NA NA NA NA NA NA NA NA NA 0.26521136 0.075118554 0.137743124 -0.131470147 0.079779879 NA 1 0.584822761 -0.69324666 0.202116729 0.0481313061 0.109852532 -0.084491678 0.048909719 NA 0.584822761 1 -0.7851972 -0.240568193 -0.0784258334 -0.135197338 0.133837379 -0.0865325184 NA -0.69324666 -0.7851972 1 both 0.5778316 0.1759107 0.12174440 0.028301887 0.10543131 0.14325843 0.2071472 0.10272537 0.1689060 0.7089870 0.33588005 0.060282522 0.086582140 0.5868319 -0.173663793 1651 477 477 1417 1188 0.5687462 0.07211383 0.0296398427 6.0 28.0 22.0 0.04483463 3.896749e-01 0.0000000000 0.04102201 5.032684e-01 -0.4328001 0.3494852 0.6162291 0.3212373 0.3488795 0.3255431 100 50 0.3641817 0.6380408 0.6871461 0.6931568 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.153846154 0.03452453 0.5349597 0.4645644 0.3762058 0.9597067 0.8834661 0.9935691 0.17358892 0.20786517 0.8146260 0.9759029 0.9248564 0.3086519 0.33623061 0.15445341 0.11862247 0.10557502 0.09459642 0.5057541 0.8059701 0.4641379 -3.00 -3.0 3.00 NA NA NA 28227 Mycoplasma penetrans 0.8196721 0.7043805 0.8013500 0.5909863 0.4093360 8.307085e-02 2.048042e-08 0.175771808 -0.128706540 0.24782219 -0.1298195190 4.662792e-13 6.803264e-09 1.000000e+00 4.793492e-13 3.726164e-03 8.565397e-04 6.566016e-05 1.609550e-04 9.088884e-08 7.818253e-03 1.000000e+00 7.662501e-01 9.835952e-02 9.964974e-02 1.054053e-04 2.382554e-04 3.531049e-03 4.662792e-13 6.36920666 0.59164681 7.818253e-03 1.69638217 0.25265236 NA NA NA 4.352397e-03 0.6691440 0.35651723 -9.2427241 1 0.7203051 0.8765112 -0.8666052 0.6648407 NA 0.15239467 -0.001051091 -0.003958175 0.7203051 1 0.3630195 -0.35887406 0.7879605 NA 0.022612090 0.0492443554 -0.0230172105 0.8765112 0.3630195 1 -0.9687993 0.4190639 NA 0.129379498 -0.016753499 0.005369492 -0.8666052 -0.35887406 -0.9687993 1 -0.41270303 NA -0.130547215 0.020718393 -0.002724961 0.6648407 0.7879605 0.4190639 -0.41270303 1 NA 0.038500535 0.003621415 0.0014934918 NA NA NA NA NA NA NA NA NA 0.15239467 0.022612090 0.129379498 -0.130547215 0.038500535 NA 1 -0.160753878 -0.02884945 -0.001051091 0.0492443554 -0.016753499 0.020718393 0.003621415 NA -0.160753878 1 -0.7699273 -0.003958175 -0.0230172105 0.005369492 -0.002724961 0.0014934918 NA -0.02884945 -0.7699273 1 both 0.2478941 0.2204767 0.21660650 0.029126214 0.21849866 0.20000000 0.2719615 0.06310680 0.2304725 0.8629405 0.23989031 0.037274915 0.197411662 0.5906640 -0.181328082 831 103 103 850 187 0.8977136 0.10911528 0.3236392647 -2.0 79.0 81.0 0.05970667 9.484621e-01 0.0000000000 0.08356726 6.609101e-01 2.6605163 0.4103490 0.7739327 0.5004594 0.4067389 0.4972925 100 50 0.5543810 0.7251685 0.8058482 0.8063644 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.000000000 0.01805054 NA 0.6817059 0.7333333 NA 0.9112830 0.9333333 0.02010724 0.00000000 0.9235152 0.9332753 0.9355709 0.7253894 0.53281085 0.19967283 0.10508143 0.07506305 0.03454476 0.3622142 0.7388889 0.2580645 2.00 9.0 24.50 NA NA NA 29292 Pyrococcus abyssi 0.5669870 0.5089745 0.6890899 0.5401882 0.5323176 2.186974e-01 7.192578e-01 0.317385578 0.150452466 0.28587849 0.0796148846 1.436724e-31 8.057062e-36 9.170472e-07 1.592706e-32 5.362567e-02 1.951355e-08 2.900773e-05 2.102725e-04 2.036349e-28 2.816104e-06 1.734742e-03 2.532301e-02 1.350330e-03 5.811096e-01 2.104908e-03 1.765415e-02 3.300927e-13 1.436724e-31 0.14820782 0.19323895 4.214229e-04 0.64973337 0.59783191 1.734742e-03 0.120658989 0.025469605 4.447448e-12 0.7713250 0.64702580 -0.5677504 1 0.8047543 0.7760851 -0.6733928 0.6642807 0.40000452 0.31158957 0.215437468 -0.293629709 0.8047543 1 0.3782309 -0.33466342 0.6972544 0.56827810 0.126200982 0.1092021506 -0.1361578518 0.7760851 0.3782309 1 -0.7411010 0.2949434 0.24045040 0.149995425 0.049637798 -0.150566046 -0.6733928 -0.33466342 -0.7411010 1 -0.23407027 -0.20485568 -0.145721594 -0.040612633 0.117185240 0.6642807 0.6972544 0.2949434 -0.23407027 1 0.2296219 0.118327374 0.123487399 -0.1359085057 0.40000452 0.56827810 0.24045040 -0.20485568 0.2296219 1 0.043244604 -0.013314905 -0.0016613329 0.31158957 0.126200982 0.149995425 -0.145721594 0.118327374 0.043244604 1 0.474418279 -0.63946231 0.215437468 0.1092021506 0.049637798 -0.040612633 0.123487399 -0.013314905 0.474418279 1 -0.7888005 -0.293629709 -0.1361578518 -0.150566046 0.117185240 -0.1359085057 -0.0016613329 -0.63946231 -0.7888005 1 both 0.4511895 0.3011683 0.22231337 0.027272727 0.23246217 0.20731707 0.2912223 0.03636364 0.2119842 0.9416026 0.36415080 0.017006631 0.257209051 0.4676824 0.064635280 1219 275 275 1003 766 0.5963905 0.08073607 0.0436250583 -5.5 7.0 12.5 0.06297738 1.948921e-01 -0.0458988005 0.02952327 9.601665e-01 -0.6730038 0.5520919 0.6941066 0.5510050 0.5537326 0.5481916 100 50 0.4773035 0.5909226 0.6832472 0.7009552 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.150943396 0.02050861 0.6334103 0.6705577 0.6411483 0.8481968 0.8564590 0.9473684 0.18707015 0.14837398 0.7424855 0.8248927 0.8321471 0.4591357 0.15770704 0.11620260 0.11222382 0.11188367 0.11374288 0.5520919 0.8302583 0.4725738 -3.00 2.0 11.00 NA NA NA 29459 Brucella melitensis 0.6056911 0.5223412 0.6960600 0.5419764 0.5224954 7.394314e-01 9.755522e-01 0.308189984 0.142087713 0.33049624 0.1172646637 2.154475e-59 5.810761e-62 9.842996e-36 5.449291e-57 4.769828e-11 1.512390e-15 1.587322e-08 2.946119e-10 4.086925e-43 1.838177e-07 3.549767e-08 5.981776e-02 1.124451e-03 2.234539e-01 1.692128e-04 1.149837e-05 2.078084e-19 2.154475e-59 0.61777681 0.59745309 3.704773e-01 0.15249801 0.13253629 3.549767e-08 0.413093804 0.216991535 2.746850e-19 0.7374325 0.49963425 -0.7401834 1 0.8504994 0.7105261 -0.6720209 0.6858530 0.60232299 0.27384510 0.238914970 -0.276103657 0.8504994 1 0.3092760 -0.28421715 0.7509503 0.75055116 0.131451380 0.1348272825 -0.1333130525 0.7105261 0.3092760 1 -0.9330041 0.2328507 0.20714424 0.125588423 0.050365448 -0.133955046 -0.6720209 -0.28421715 -0.9330041 1 -0.19400419 -0.15611487 -0.126725147 -0.055580103 0.130196991 0.6858530 0.7509503 0.2328507 -0.19400419 1 0.5657368 0.114100454 0.126632456 -0.1144064594 0.60232299 0.75055116 0.20714424 -0.15611487 0.5657368 1 0.062808974 0.052379765 -0.0651908053 0.27384510 0.131451380 0.125588423 -0.126725147 0.114100454 0.062808974 1 0.760338021 -0.83616028 0.238914970 0.1348272825 0.050365448 -0.055580103 0.126632456 0.052379765 0.760338021 1 -0.7619583 -0.276103657 -0.1333130525 -0.133955046 0.130196991 -0.1144064594 -0.0651908053 -0.83616028 -0.7619583 1 both 0.4366577 0.3054140 0.28975741 0.075102881 0.31538992 0.24195624 0.4775382 0.22222222 0.3999375 0.7777934 0.28914900 0.106112144 0.265313898 0.4775046 0.044990706 2226 487 485 1937 1261 0.6509434 0.03316360 0.6341793508 0.0 61.0 61.0 0.07785425 4.347117e-03 0.0323465054 0.07472068 7.050839e-03 3.7003657 0.5202156 0.6592945 0.4940091 0.5134771 0.4802762 110 55 0.5505029 0.4370005 0.6589078 0.6704504 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.102875112 0.02515723 0.6504874 0.6505984 0.6245614 0.8779451 0.8755961 0.9719298 0.12836439 0.12741313 0.8087768 0.8644051 0.8853883 0.6101135 0.49040085 0.44283713 0.33064630 0.26093626 0.15959677 0.3342318 0.4837209 0.2732448 -3.00 13.0 86.50 NA NA NA 36870 Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 0.6085627 0.5235717 0.7003058 0.5505625 0.5297062 5.119694e-01 2.427011e-01 0.309148174 0.535447466 0.13180248 -0.0410815016 8.278083e-23 1.072877e-25 6.332096e-22 5.428650e-23 4.502532e-04 5.636408e-05 7.437949e-02 3.735716e-02 8.027510e-14 1.490699e-04 9.521114e-04 3.857783e-02 6.049515e-02 2.203654e-02 1.381968e-01 4.989518e-02 2.433741e-06 8.278083e-23 0.23059699 0.22973994 5.935679e-02 0.81978345 0.87061874 9.521114e-04 -0.003247327 -0.002874449 1.289297e-05 0.6975349 0.53697870 -0.5720676 1 0.9551587 0.6456722 -0.6080794 0.8283290 0.81664007 0.17645672 0.050187101 -0.089968542 0.9551587 1 0.4187358 -0.39996313 0.8778891 0.84427213 0.112517267 0.0175061155 -0.0475358583 0.6456722 0.4187358 1 -0.9030264 0.3287897 0.38676633 0.060180279 -0.022055453 -0.012707552 -0.6080794 -0.39996313 -0.9030264 1 -0.29663960 -0.34627124 -0.044289204 0.026077845 0.001432422 0.8283290 0.8778891 0.3287897 -0.29663960 1 0.8018751 0.139534471 0.010750544 -0.0541161245 0.81664007 0.84427213 0.38676633 -0.34627124 0.8018751 1 0.117778961 0.006830178 -0.0270727358 0.17645672 0.112517267 0.060180279 -0.044289204 0.139534471 0.117778961 1 0.396022009 -0.45945944 0.050187101 0.0175061155 -0.022055453 0.026077845 0.010750544 0.006830178 0.396022009 1 -0.8289029 -0.089968542 -0.0475358583 -0.012707552 0.001432422 -0.0541161245 -0.0270727358 -0.45945944 -0.8289029 1 both 0.4279476 0.4128390 0.50436681 0.168367347 0.56187291 0.39622642 0.4279476 0.08163265 0.3241590 0.9102896 0.24499495 0.038391329 0.351164940 0.4702938 0.059412442 458 98 98 398 256 0.6528384 0.09947203 0.2558600546 -12.0 45.0 57.0 0.21795924 1.041925e-04 0.1351401991 0.20687407 2.769712e-04 11.5461489 0.5895197 0.8134145 0.6412137 0.5851528 0.6387493 100 50 0.7140039 0.4014972 0.7511999 0.7539514 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.028384279 0.01528384 0.6831466 0.7284709 0.8000000 0.7849416 0.8401405 0.8000000 0.05016722 0.03144654 0.6951852 0.7340330 0.7483253 0.6821952 0.57715297 0.29058271 0.22221128 0.21000324 0.21195816 0.3602620 0.4935065 0.2246696 6.00 20.0 57.00 NA NA NA 50339 Thermoplasma volcanium 0.5657105 0.5086357 0.6384256 0.4215143 0.4137395 2.535243e-03 5.909808e-01 0.278871829 0.188262099 0.19436991 0.1030868342 1.404307e-28 7.391960e-32 1.048615e-01 1.657940e-33 2.556290e-04 1.345155e-12 4.707745e-02 6.896063e-03 5.620029e-24 1.041089e-04 3.461353e-01 1.941737e-06 9.474593e-01 8.056426e-02 3.231725e-02 1.141695e-02 5.617264e-10 1.404307e-28 0.09008171 0.11394112 1.555203e-04 0.92849254 0.70882662 3.461353e-01 0.137226182 0.008406827 2.366334e-08 0.6693221 0.46101302 -0.4709712 1 0.7420221 0.8924819 -0.8923219 0.6812505 0.40605584 0.05876109 0.003596340 -0.052386008 0.7420221 1 0.4228457 -0.42270151 0.7137196 0.32285035 0.047753226 0.0098427255 -0.0209685711 0.8924819 0.4228457 1 -0.9996476 0.4322414 0.37452457 0.028424214 -0.010586250 -0.046924839 -0.8923219 -0.42270151 -0.9996476 1 -0.43281182 -0.37412655 -0.027210272 0.010944712 0.045789415 0.6812505 0.7137196 0.4322414 -0.43281182 1 0.2719570 0.019588850 -0.020209775 -0.0127062960 0.40605584 0.32285035 0.37452457 -0.37412655 0.2719570 1 -0.018006107 -0.087311371 0.0336528626 0.05876109 0.047753226 0.028424214 -0.027210272 0.019588850 -0.018006107 1 0.595866510 -0.57501302 0.003596340 0.0098427255 -0.010586250 0.010944712 -0.020209775 -0.087311371 0.595866510 1 -0.8120683 -0.052386008 -0.0209685711 -0.046924839 0.045789415 -0.0127062960 0.0336528626 -0.57501302 -0.8120683 1 both 0.5663532 0.2943573 0.21107628 0.022140221 0.21701389 0.20209974 0.5214211 0.38376384 0.4716478 0.5685146 0.24510894 0.224985585 0.071449938 0.5862605 -0.172521029 957 271 271 848 651 0.6018809 0.03395669 0.9541195166 -2.0 33.0 35.0 0.06072288 3.663296e-01 0.0240493695 0.02652012 9.970267e-01 0.6505459 0.4493208 0.5679773 0.6436415 0.4514107 0.6465086 100 50 0.6452786 0.7211790 0.8104240 0.8116459 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.119122257 0.03030303 0.6090992 0.5693313 0.5384615 0.9255189 0.9040735 1.0000000 0.15104167 0.14698163 0.9626325 0.9569216 0.9461761 0.4772504 0.28602999 0.19706852 0.11665772 0.08733598 0.05648100 0.4587252 0.8564356 0.3523179 -3.00 0.0 6.00 NA NA NA 53953 Pyrococcus horikoshii 0.5930039 0.5172994 0.6346474 0.3982194 0.3830587 2.073286e-01 1.982781e-02 0.205058182 0.251766885 0.16431575 0.0158728282 1.728100e-38 4.965124e-45 1.856542e-15 3.325869e-44 4.005204e-06 6.505521e-10 5.142630e-06 1.127500e-06 8.053648e-28 3.771367e-10 6.578944e-08 2.202478e-07 9.171855e-01 1.461549e-01 1.488125e-04 3.512120e-05 1.804228e-10 1.728100e-38 0.30419775 0.39378313 5.855179e-04 0.54633270 0.50174455 6.578944e-08 0.249468190 0.097578058 1.170436e-09 0.6923605 0.50336658 -0.4383791 1 0.9334887 0.6095800 -0.4880561 0.6833386 0.63382987 0.21553335 -0.049053116 -0.041139173 0.9334887 1 0.3460842 -0.26763599 0.7046744 0.67732788 0.123737777 -0.0709866611 0.0015778614 0.6095800 0.3460842 1 -0.6725971 0.2897635 0.24426794 0.084282792 0.013725022 -0.079882168 -0.4880561 -0.26763599 -0.6725971 1 -0.21525798 -0.20722850 -0.111416508 -0.023145404 0.094894477 0.6833386 0.7046744 0.2897635 -0.21525798 1 0.2798631 0.075699063 0.014860178 -0.0169427827 0.63382987 0.67732788 0.24426794 -0.20722850 0.2798631 1 0.070243403 -0.102572645 0.0279500382 0.21553335 0.123737777 0.084282792 -0.111416508 0.075699063 0.070243403 1 0.062557392 -0.14557217 -0.049053116 -0.0709866611 0.013725022 -0.023145404 0.014860178 -0.102572645 0.062557392 1 -0.7959329 -0.041139173 0.0015778614 -0.079882168 0.094894477 -0.0169427827 0.0279500382 -0.14557217 -0.7959329 1 both 0.5756780 0.3326567 0.20297463 0.013677812 0.22357724 0.16543210 0.6167979 0.37386018 0.5280400 0.6260529 -0.00806218 0.230649805 0.155498289 0.5755317 -0.151063390 1143 330 328 1068 733 0.6456693 0.04378199 0.6978936070 -3.0 11.0 14.0 0.08458296 4.743018e-02 0.0140133421 0.05814514 3.396065e-01 1.6957658 0.3972003 0.5703879 0.5308604 0.4103237 0.5512040 100 50 0.6375190 0.3462099 0.7080004 0.7165326 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.145231846 0.01924759 0.5251768 0.5882410 0.4148936 0.6224268 0.7004501 0.6382979 0.16531165 0.16296296 0.5983081 0.6951601 0.7338737 0.5428828 0.47785954 0.27211012 0.18216576 0.13398855 0.06512194 0.5196850 0.8060345 0.4467618 -3.00 2.0 11.50 NA NA NA 56636 Aeropyrum pernix 0.5418478 0.5035025 0.5684783 0.2327764 0.2302081 7.422314e-01 4.411066e-01 0.502023516 0.221971211 0.55058605 0.2224596812 1.022618e-33 5.484422e-38 1.000000e+00 3.410739e-33 3.658574e-13 2.749979e-15 6.098187e-16 3.141158e-21 7.403852e-35 6.283568e-07 1.000000e+00 3.385051e-04 4.386902e-01 5.041562e-01 5.664292e-10 4.769671e-13 1.315192e-15 1.022618e-33 -0.52513106 -0.59211700 6.283568e-07 1.63098128 1.26264087 NA NA NA 2.466611e-13 0.7291271 0.55635265 -0.1161018 1 0.8311769 0.7243170 -0.5775963 0.6909819 NA 0.42585884 0.334217351 -0.413537892 0.8311769 1 0.3646241 -0.27520011 0.7984053 NA 0.197126262 0.1493837785 -0.1864209015 0.7243170 0.3646241 1 -0.8411883 0.3631646 NA 0.200589136 0.127165888 -0.244703626 -0.5775963 -0.27520011 -0.8411883 1 -0.25919977 NA -0.105532646 -0.044854821 0.141130744 0.6909819 0.7984053 0.3631646 -0.25919977 1 NA 0.196029475 0.150765471 -0.2008479292 NA NA NA NA NA NA NA NA NA 0.42585884 0.197126262 0.200589136 -0.105532646 0.196029475 NA 1 0.824079472 -0.77097079 0.334217351 0.1493837785 0.127165888 -0.044854821 0.150765471 NA 0.824079472 1 -0.6549915 -0.413537892 -0.1864209015 -0.244703626 0.141130744 -0.2008479292 NA -0.77097079 -0.6549915 1 both 0.7590822 0.3178608 0.22179732 0.036523929 0.24707846 0.18791946 0.3900574 0.16246851 0.2918478 0.6793627 -0.05702558 0.125066950 0.139923462 0.6740153 -0.348030649 1046 398 396 997 843 0.5726577 0.03168965 0.9592817180 -2.0 55.0 57.0 0.09531546 1.910141e-02 0.0000000000 0.05915900 3.318086e-01 0.8187657 0.2791587 0.4963176 0.8469386 0.2753346 0.8517619 100 50 0.8897638 0.5074003 0.9080863 0.9105669 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.033460803 0.01242830 0.5624611 0.6279089 0.6458333 0.6371163 0.7237413 0.6458333 0.04674457 0.04474273 0.7592485 0.7980251 0.8098830 0.6637373 0.60150982 0.34249949 0.31697758 0.22289054 0.12148189 0.3107075 0.5905172 0.2309582 -2.25 11.5 36.75 NA NA NA 64091 Halobacterium sp. NRC-1 0.5272289 0.5014828 0.5836145 0.2835259 0.2822957 9.024122e-01 3.158718e-01 0.558130237 0.456755367 0.34427667 0.2010711543 1.528659e-29 7.808877e-18 9.999951e-01 1.288013e-29 4.049778e-10 3.037822e-14 1.894828e-08 7.041913e-06 8.034524e-17 1.240092e-01 1.000000e+00 5.415118e-01 5.059714e-01 4.222555e-01 1.565803e-06 1.712773e-04 1.944949e-06 1.528659e-29 0.47968418 0.53557953 1.240092e-01 1.51704045 0.08865299 NA NA NA 2.433993e-06 0.6501379 0.27167498 -0.3968524 1 0.6873530 0.8184820 -0.7260298 0.6030904 NA 0.30811781 0.037107854 -0.075074337 0.6873530 1 0.3096725 -0.28366834 0.6866256 NA 0.108970737 0.0433193718 -0.0125516405 0.8184820 0.3096725 1 -0.8529795 0.2925695 NA 0.108670505 -0.030728997 -0.029879751 -0.7260298 -0.28366834 -0.8529795 1 -0.26911472 NA -0.119314049 0.013731307 0.035762216 0.6030904 0.6866256 0.2925695 -0.26911472 1 NA 0.117355461 0.025256059 0.0095472415 NA NA NA NA NA NA NA NA NA 0.30811781 0.108970737 0.108670505 -0.119314049 0.117355461 NA 1 0.103557785 -0.14592711 0.037107854 0.0433193718 -0.030728997 0.013731307 0.025256059 NA 0.103557785 1 -0.7596143 -0.075074337 -0.0125516405 -0.029879751 0.035762216 0.0095472415 NA -0.14592711 -0.7596143 1 both 0.7134600 0.2521906 0.15276631 0.015046296 0.12708018 0.18363636 0.3253509 0.16087963 0.2568675 0.6451094 0.10732804 0.115464000 0.094422949 0.7177043 -0.435408581 1211 432 432 1094 981 0.5458299 0.07494430 0.0686179567 2.0 51.0 49.0 0.07404484 7.436644e-02 0.0000000000 0.06341356 1.787091e-01 -1.3812294 0.2221305 0.5302254 0.4098121 0.2171759 0.3894037 100 50 0.7279664 0.5794576 0.7602350 0.7721749 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.112303881 0.04872007 0.4560610 0.4709908 0.4871795 0.6674022 0.6955582 0.5282051 0.15128593 0.17272727 0.7246235 0.8505531 0.8610637 0.4008540 0.31506484 0.28898168 0.22287506 0.17805833 0.12248129 0.3658134 0.7243243 0.3011696 -3.00 2.0 35.25 NA NA NA 71421 Haemophilus influenzae Rd KW20 0.5746791 0.5111539 0.7327888 0.6276606 0.6187100 5.785739e-01 2.942641e-02 0.324353122 0.011485928 0.26176114 0.0045522050 3.291559e-45 1.901098e-46 1.000000e+00 7.332054e-41 4.644482e-03 1.643868e-17 3.335846e-06 7.697945e-05 6.787479e-19 5.967414e-06 1.000000e+00 4.839855e-01 9.525033e-01 2.279521e-02 7.105096e-04 7.551487e-03 4.817731e-04 3.291559e-45 0.52735090 0.71453845 5.967414e-06 0.48900833 0.58117708 NA NA NA 3.169964e-03 0.4230959 0.24841172 -0.4320078 1 0.8611803 0.7531328 -0.6459817 0.8128978 NA 0.27902333 0.220476829 -0.247062412 0.8611803 1 0.3975606 -0.34759431 0.8922323 NA 0.157404676 0.1483238705 -0.1292664489 0.7531328 0.3975606 1 -0.7741301 0.3741785 NA 0.125344625 0.078512706 -0.128035014 -0.6459817 -0.34759431 -0.7741301 1 -0.29988015 NA -0.159341561 -0.126146078 0.155886997 0.8128978 0.8922323 0.3741785 -0.29988015 1 NA 0.138732989 0.099156030 -0.1135201910 NA NA NA NA NA NA NA NA NA 0.27902333 0.157404676 0.125344625 -0.159341561 0.138732989 NA 1 0.752434791 -0.81334854 0.220476829 0.1483238705 0.078512706 -0.126146078 0.099156030 NA 0.752434791 1 -0.8029987 -0.247062412 -0.1292664489 -0.128035014 0.155886997 -0.1135201910 NA -0.81334854 -0.8029987 1 both 0.3646497 0.3312613 0.58200637 0.296943231 0.56291391 0.61077844 0.3813694 0.11135371 0.3092182 0.8886695 0.45228708 0.042458058 0.296453310 0.3812900 0.237419971 1256 229 229 985 729 0.6011146 0.05891528 0.2467471163 8.0 41.0 33.0 0.04711108 5.158520e-01 -0.0071823795 0.04786454 4.951932e-01 3.6368782 0.6608280 0.7933304 0.5882370 0.6552548 0.5813898 100 50 0.4883221 0.5936448 0.7163768 0.7288211 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.049363057 0.06210191 0.6908135 0.7162954 0.7000000 0.8184233 0.8711042 0.9785714 0.11920530 0.09980040 0.6543526 0.7058096 0.7585888 0.8143669 0.65170993 0.33220067 0.14086263 0.08283016 0.04831870 0.4450637 0.5841313 0.2514286 3.00 16.0 63.00 NA NA NA 83331 Mycobacterium tuberculosis CDC1551 0.5911154 0.5166040 0.6484356 0.4351863 0.4205810 6.392653e-01 2.797526e-01 0.346273697 0.181729222 0.36407839 0.1921201618 1.945066e-42 7.805006e-54 3.496678e-34 2.631717e-58 4.854211e-21 5.508655e-26 3.956058e-07 7.422007e-08 6.560482e-44 3.632069e-16 6.567812e-15 7.158415e-18 4.298774e-02 2.892035e-02 1.240103e-04 1.799174e-05 1.785748e-23 1.945066e-42 0.26650954 0.20802118 2.041263e-03 0.41229768 0.25380000 6.567812e-15 0.337875094 0.122217348 3.686308e-20 0.7638788 0.46381426 -0.4744552 1 0.7968213 0.7667999 -0.6735740 0.5701473 0.63181815 0.28596096 0.203394918 -0.275371895 0.7968213 1 0.3029081 -0.24767331 0.6134354 0.79715293 0.151100700 0.0782025471 -0.1469063194 0.7667999 0.3029081 1 -0.8886982 0.2556398 0.24128813 0.121997449 0.085117758 -0.138269811 -0.6735740 -0.24767331 -0.8886982 1 -0.20925490 -0.19128168 -0.109717285 -0.080046464 0.127659770 0.5701473 0.6134354 0.2556398 -0.20925490 1 0.4174932 0.084862978 0.102312857 -0.0855927377 0.63181815 0.79715293 0.24128813 -0.19128168 0.4174932 1 0.128804564 0.062307891 -0.1325403492 0.28596096 0.151100700 0.121997449 -0.109717285 0.084862978 0.128804564 1 0.483640218 -0.59778485 0.203394918 0.0782025471 0.085117758 -0.080046464 0.102312857 0.062307891 0.483640218 1 -0.7301053 -0.275371895 -0.1469063194 -0.138269811 0.127659770 -0.0855927377 -0.1325403492 -0.59778485 -0.7301053 1 both 0.5421731 0.2574248 0.16464088 0.030570652 0.19102417 0.11770727 0.3848987 0.20176630 0.3205159 0.6962650 0.24807221 0.116907226 0.151084258 0.5794190 -0.158837959 2715 736 736 2475 1712 0.6401473 0.04710116 0.1246649255 -6.5 26.5 33.0 0.12283793 1.270725e-08 0.0000000000 0.07331690 2.404003e-03 2.2881678 0.4011050 0.6116563 0.4510675 0.4047882 0.4685851 134 67 0.5540881 0.5003668 0.6558392 0.6633936 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.165377532 0.03278085 0.5369652 0.6274582 0.5204461 0.8015951 0.8630467 0.8717472 0.20713464 0.18219038 0.6507122 0.8591193 0.8595242 0.4724217 0.35755731 0.30874860 0.17572195 0.12240626 0.08098295 0.4563536 0.7069351 0.4069665 -3.00 1.0 23.00 NA NA NA 83332 Mycobacterium tuberculosis H37Rv 0.5925643 0.5171363 0.6684492 0.4839268 0.4687950 9.034153e-01 1.907852e-02 0.385932600 0.254517491 0.36970350 0.2444843648 5.465867e-44 1.710334e-43 6.265083e-23 2.640577e-48 2.634923e-14 2.751361e-22 2.972140e-05 8.789484e-03 8.697591e-50 2.151768e-06 1.377959e-05 8.119301e-06 5.829319e-01 3.403652e-01 7.265321e-04 1.012798e-01 1.386403e-28 5.465867e-44 0.39280874 0.30859485 3.817637e-02 0.30820760 0.18475955 1.377959e-05 0.253132453 0.088927799 3.371525e-28 0.8460066 0.59084936 -0.5716768 1 0.7024309 0.8321908 -0.8217408 0.5698727 0.42672158 0.27603406 0.243334763 -0.273290304 0.7024309 1 0.3031080 -0.29511613 0.6153397 0.65065180 0.107854830 0.0921796021 -0.1048945077 0.8321908 0.3031080 1 -0.9672159 0.2702574 0.20581419 0.139360182 0.107523056 -0.155812250 -0.8217408 -0.29511613 -0.9672159 1 -0.24825298 -0.18897118 -0.137924846 -0.108890106 0.151301205 0.5698727 0.6153397 0.2702574 -0.24825298 1 0.4056938 0.086673522 0.073001094 -0.0745290854 0.42672158 0.65065180 0.20581419 -0.18897118 0.4056938 1 0.079514318 0.052317992 -0.0939306207 0.27603406 0.107854830 0.139360182 -0.137924846 0.086673522 0.079514318 1 0.889356908 -0.86137467 0.243334763 0.0921796021 0.107523056 -0.108890106 0.073001094 0.052317992 0.889356908 1 -0.7427335 -0.273290304 -0.1048945077 -0.155812250 0.151301205 -0.0745290854 -0.0939306207 -0.86137467 -0.7427335 1 both 0.4960000 0.2603830 0.17638095 0.039170507 0.20835821 0.12000000 0.3771429 0.16589862 0.3071047 0.7663321 0.28863494 0.088126172 0.200890513 0.5312050 -0.062409966 2625 651 651 2327 1600 0.6380952 0.06807541 0.0072602314 -12.0 25.0 37.0 0.12089552 4.030936e-08 0.0000000000 0.08835821 1.549945e-04 2.7453912 0.4769524 0.6092229 0.5191091 0.4727619 0.5087485 130 65 0.4904614 0.5290638 0.6471268 0.6556629 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.193904762 0.04038095 0.5718573 0.6305206 0.5463415 0.8457460 0.8812839 0.9869919 0.24358209 0.21789474 0.8212957 0.8628552 0.8682904 0.4921632 0.39499828 0.27156549 0.18803927 0.12732854 0.07208940 0.4914286 0.7473002 0.4366327 -3.00 0.0 17.00 NA NA NA 83333 Escherichia coli K12 0.5569058 0.5064765 0.7022669 0.5704083 0.5649126 9.575003e-04 4.983661e-02 0.404125482 0.214815432 0.37116467 0.1483982543 9.805112e-86 1.839819e-88 4.994372e-41 1.811824e-80 6.783317e-17 5.946634e-42 3.387530e-11 3.069647e-10 1.339555e-53 1.259919e-06 8.365838e-04 6.048631e-02 1.849471e-05 6.875743e-01 1.440293e-04 3.768929e-04 6.263344e-20 9.805112e-86 0.22956822 0.21349753 2.302411e-04 0.76745556 0.68438595 8.365838e-04 -0.195026672 -0.080698775 2.549525e-19 0.6916565 0.47580973 -0.4148415 1 0.7675907 0.8755976 -0.8091497 0.6935678 0.50365332 0.29609228 0.245725363 -0.321825639 0.7675907 1 0.4332893 -0.39790845 0.8077497 0.69039115 0.173191723 0.1472913480 -0.1832485939 0.8755976 0.4332893 1 -0.9091879 0.3738736 0.29699484 0.131680996 0.077478288 -0.175689659 -0.8091497 -0.39790845 -0.9091879 1 -0.33325076 -0.24300670 -0.131098699 -0.076570781 0.180386308 0.6935678 0.8077497 0.3738736 -0.33325076 1 0.5714036 0.182162634 0.169091127 -0.1819515430 0.50365332 0.69039115 0.29699484 -0.24300670 0.5714036 1 0.070541163 0.052179634 -0.0755141023 0.29609228 0.173191723 0.131680996 -0.131098699 0.182162634 0.070541163 1 0.911930828 -0.88572446 0.245725363 0.1472913480 0.077478288 -0.076570781 0.169091127 0.052179634 0.911930828 1 -0.7649460 -0.321825639 -0.1832485939 -0.175689659 0.180386308 -0.1819515430 -0.0755141023 -0.88572446 -0.7649460 1 both 0.4239601 0.3030473 0.36039933 0.114599686 0.37936963 0.33412698 0.4352745 0.15463108 0.3517177 0.8454354 0.34869352 0.067278034 0.300718475 0.4350874 0.129825231 3005 638 636 2383 1896 0.5806988 0.02789603 0.6194683553 -5.0 36.0 41.0 0.06124983 8.256844e-03 0.0171239518 0.06300086 6.005424e-03 3.0050109 0.5527454 0.6868872 0.4623915 0.5517471 0.4589549 150 75 0.4894444 0.6420554 0.7451051 0.7538757 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.085191348 0.05058236 0.7071042 0.7212015 0.7156863 0.9640649 0.9754546 1.0000000 0.13868195 0.13174603 0.8531033 0.9467954 0.9632472 0.6782861 0.44683523 0.26867057 0.15989653 0.09751307 0.04573087 0.4312812 0.6546630 0.3054110 -3.00 10.0 31.00 NA NA NA 83334 Escherichia coli O157:H7 0.5900019 0.5162007 0.7351240 0.6284217 0.6155541 7.156212e-02 7.128426e-01 0.429960842 0.275331895 0.41993118 0.2267069453 3.437931e-62 6.005365e-75 6.326188e-37 1.305789e-79 1.137874e-05 1.337379e-32 6.586402e-11 4.965816e-13 3.015115e-51 1.120935e-15 1.717623e-08 8.604242e-22 1.094617e-03 3.118537e-02 3.018159e-05 4.022276e-07 7.203504e-28 3.437931e-62 0.08678766 0.06813176 1.347487e-09 1.06787881 0.71683401 1.717623e-08 -0.367970717 -0.112780670 5.512599e-25 0.8021369 0.48177658 -0.6038999 1 0.6795388 0.8876048 -0.7494308 0.5894256 0.43045025 0.26148127 0.209783014 -0.286135978 0.6795388 1 0.3513883 -0.32738292 0.7105176 0.49971029 0.152904131 0.1720508818 -0.1690233901 0.8876048 0.3513883 1 -0.8223048 0.3081709 0.23538188 0.120552180 0.060186595 -0.150253752 -0.7494308 -0.32738292 -0.8223048 1 -0.24133832 -0.15452942 -0.116973205 -0.050669523 0.139435258 0.5894256 0.7105176 0.3081709 -0.24133832 1 0.5798516 0.155072318 0.171571315 -0.1664896070 0.43045025 0.49971029 0.23538188 -0.15452942 0.5798516 1 0.088944563 0.063874612 -0.0956500575 0.26148127 0.152904131 0.120552180 -0.116973205 0.155072318 0.088944563 1 0.711097926 -0.82696296 0.209783014 0.1720508818 0.060186595 -0.050669523 0.171571315 0.063874612 0.711097926 1 -0.7484783 -0.286135978 -0.1690233901 -0.150253752 0.139435258 -0.1664896070 -0.0956500575 -0.82696296 -0.7484783 1 both 0.3603146 0.2653758 0.27429586 0.101408451 0.26957586 0.28206850 0.3839127 0.16901408 0.3269912 0.8307512 0.48145479 0.064976769 0.253959175 0.3844459 0.231108236 3941 710 710 3163 2198 0.6221771 0.03515010 0.2024753761 -9.0 31.0 40.0 0.04751758 3.048780e-02 0.0000000000 0.03191704 3.018718e-01 1.7645649 0.5828470 0.7095735 0.4202731 0.5856382 0.4271605 196 98 0.3743853 0.6363758 0.7117761 0.7214471 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.096929713 0.04643491 0.7072429 0.7468068 0.9061947 0.9632110 0.9760715 0.9946903 0.14559543 0.13969107 0.7537706 0.9373985 0.9536117 0.7574372 0.53897327 0.27131503 0.16420749 0.09140273 0.03616047 0.4359300 0.6604995 0.3510490 0.00 10.0 36.50 NA NA NA 83560 Chlamydia muridarum 0.5685841 0.5094075 0.7057522 0.5752458 0.5670822 0.000000e+00 0.000000e+00 0.379510757 -0.230147276 0.43154972 -0.2511945958 1.108407e-19 2.465724e-17 3.562286e-07 7.557256e-14 3.125149e-05 7.422675e-06 2.237427e-24 1.885952e-25 7.611404e-16 7.974846e-05 1.326231e-03 1.528516e-03 4.737274e-01 3.185022e-01 2.005369e-22 6.966786e-24 1.733012e-04 1.108407e-19 7.90199937 0.67132924 1.673865e-02 1.16002073 0.43324204 1.326231e-03 -0.006901425 -0.002255552 8.565558e-05 0.6961819 0.59888048 -5.8027794 1 0.8499452 0.7232671 -0.6837197 0.6797347 0.57615908 0.23865083 0.036072720 -0.091220210 0.8499452 1 0.3533391 -0.30919452 0.7006949 0.64399335 0.112118506 0.0381086384 -0.0613931642 0.7232671 0.3533391 1 -0.8942027 0.2708079 0.35806885 0.104612024 -0.010279097 -0.008959086 -0.6837197 -0.30919452 -0.8942027 1 -0.23114789 -0.30791440 -0.096449062 0.019111371 0.016735412 0.6797347 0.7006949 0.2708079 -0.23114789 1 0.2727269 0.054705747 -0.024738670 0.0201096189 0.57615908 0.64399335 0.35806885 -0.30791440 0.2727269 1 0.135086460 0.076837372 -0.0803933024 0.23865083 0.112118506 0.104612024 -0.096449062 0.054705747 0.135086460 1 0.217554890 -0.49629945 0.036072720 0.0381086384 -0.010279097 0.019111371 -0.024738670 0.076837372 0.217554890 1 -0.6483283 -0.091220210 -0.0613931642 -0.008959086 0.016735412 0.0201096189 -0.0803933024 -0.49629945 -0.6483283 1 both 0.4169279 0.3080306 0.20376176 0.007518797 0.23421053 0.15891473 0.3040752 0.06766917 0.2345133 0.9036581 0.42001972 0.029295192 0.245484852 0.4329178 0.134164337 638 133 133 514 390 0.5956113 0.06495308 0.5357438083 7.0 27.0 20.0 0.11113831 4.491486e-02 0.0000000000 0.09783762 1.055178e-01 7.8501753 0.5642633 0.7252546 0.4917219 0.5626959 0.4904741 100 50 0.4894411 0.4939693 0.6345555 0.6456634 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.059561129 0.01410658 0.6890813 0.7277993 0.7446809 0.8570445 0.8817052 0.9787234 0.05000000 0.10852713 0.7604352 0.7730979 0.7723089 0.6684094 0.45054478 0.24351436 0.19609638 0.19205117 0.19801725 0.4545455 0.7076923 0.3897638 -3.00 8.0 23.00 NA NA NA 84588 Synechococcus sp. WH 8102 0.5414074 0.5034291 0.6419339 0.4376182 0.4345035 1.950560e-01 4.954339e-01 0.379866753 0.224175378 0.37048624 0.1996484119 4.041105e-27 4.991698e-25 1.000000e+00 7.343460e-28 1.251810e-02 2.755088e-03 6.634892e-05 8.815432e-06 4.612004e-14 2.818264e-01 1.000000e+00 1.507139e-02 5.806772e-03 2.757543e-03 2.257731e-03 2.047573e-04 5.517309e-05 4.041105e-27 0.63686675 0.39958886 2.818264e-01 0.30083622 0.18308185 NA NA NA 4.009700e-05 0.6458980 0.25923919 -0.3444978 1 0.6810953 0.7508061 -0.6875176 0.6832444 NA 0.19086629 0.086148283 -0.128886554 0.6810953 1 0.1719409 -0.14676812 0.7540453 NA 0.080624425 0.1041847115 -0.0817741212 0.7508061 0.1719409 1 -0.8934704 0.2257255 NA 0.076612674 -0.052293815 -0.037201520 -0.6875176 -0.14676812 -0.8934704 1 -0.17656741 NA -0.087914619 0.041096646 0.061223901 0.6832444 0.7540453 0.2257255 -0.17656741 1 NA 0.105411586 0.095955227 -0.0856708312 NA NA NA NA NA NA NA NA NA 0.19086629 0.080624425 0.076612674 -0.087914619 0.105411586 NA 1 0.357239849 -0.48887556 0.086148283 0.1041847115 -0.052293815 0.041096646 0.095955227 NA 0.357239849 1 -0.7442498 -0.128886554 -0.0817741212 -0.037201520 0.061223901 -0.0856708312 NA -0.48887556 -0.7442498 1 both 0.5577927 0.2238196 0.22744221 0.085561497 0.26455026 0.17948718 0.2684564 0.11497326 0.2134993 0.7578117 0.31585824 0.065016980 0.138422415 0.5654965 -0.130993052 1341 375 373 1131 958 0.5637584 0.05437525 0.2836983264 8.0 36.0 28.0 0.09110704 8.380600e-03 0.0000000000 0.08506309 1.691558e-02 5.4204063 0.3989560 0.6040725 0.4396568 0.3959732 0.4449057 100 50 0.4708113 0.3515321 0.5333897 0.5394554 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.127516779 0.05518270 0.4672892 0.5640492 0.3755102 0.6417598 0.7675459 0.8285714 0.18121693 0.18461538 0.6084452 0.7132713 0.7801611 0.5496036 0.53224288 0.38115912 0.24189737 0.16359695 0.09220029 0.4638330 0.6327869 0.4140927 0.00 11.0 51.00 NA NA NA 85962 Helicobacter pylori 26695 0.6008883 0.5203569 0.7779188 0.7045404 0.6902861 6.154765e-01 4.455861e-01 0.234242335 0.048354165 0.17519010 -0.0001856389 5.301895e-22 4.033123e-20 4.526889e-05 5.739163e-23 6.393300e-09 1.058554e-11 6.094144e-03 2.482201e-03 5.441641e-06 1.749951e-01 1.078216e-01 3.570714e-02 7.904716e-01 4.071652e-01 4.416054e-02 2.356682e-02 5.248323e-01 5.301895e-22 0.82169198 0.67062121 6.420572e-01 0.15345326 0.10106493 1.078216e-01 0.326395534 0.075382041 6.105188e-01 0.1397797 0.04320839 -0.5486773 1 0.6705329 0.8758621 -0.6823159 0.6962056 0.40543139 0.20725516 0.164580279 -0.183009874 0.6705329 1 0.3658962 -0.27221574 0.7883260 0.71635742 0.067689700 0.0214425068 -0.0808777242 0.8758621 0.3658962 1 -0.6996662 0.3268997 0.27965504 0.110378212 0.082499064 -0.098174413 -0.6823159 -0.27221574 -0.6996662 1 -0.24985181 -0.18453278 -0.112648951 -0.083201168 0.092430101 0.6962056 0.7883260 0.3268997 -0.24985181 1 0.3050418 0.082223456 0.072272319 -0.0850700207 0.40543139 0.71635742 0.27965504 -0.18453278 0.3050418 1 0.034928184 -0.046737801 -0.0289924150 0.20725516 0.067689700 0.110378212 -0.112648951 0.082223456 0.034928184 1 0.786310712 -0.72517440 0.164580279 0.0214425068 0.082499064 -0.083201168 0.072272319 -0.046737801 0.786310712 1 -0.8130405 -0.183009874 -0.0808777242 -0.098174413 0.092430101 -0.0850700207 -0.0289924150 -0.72517440 -0.8130405 1 both 0.2854812 0.2194492 0.26835237 0.054285714 0.28793774 0.23516484 0.3099511 0.09142857 0.2614213 0.9086414 0.59220689 0.028316700 0.253317660 0.3097139 0.380572189 1226 175 175 947 629 0.6288744 0.04551817 0.5936824862 -1.0 13.0 14.0 0.06387309 1.934927e-01 0.0000000000 0.05494220 3.534691e-01 3.5529939 0.6492659 0.7515637 0.3865472 0.6541599 0.3880419 100 50 0.3801658 0.6893471 0.7312195 0.7349885 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.091353997 0.04649266 0.7316031 0.7827692 1.0000000 0.9231046 0.9559461 1.0000000 0.13878080 0.13626374 0.6475678 0.8335800 0.8738353 0.6090132 0.31491526 0.10417140 0.04786052 0.03183196 0.01777774 0.5807504 0.8510638 0.4816054 -3.00 5.0 15.00 NA NA NA 85963 Helicobacter pylori J99 0.5821596 0.5135004 0.7800134 0.7116107 0.7023181 7.126362e-01 1.695606e-01 0.244145758 0.087666975 0.18516891 0.0499225595 4.410497e-22 3.645496e-20 3.386804e-03 6.578056e-23 1.775615e-09 1.816119e-10 2.284557e-02 2.784003e-02 1.650763e-08 2.770319e-01 4.330848e-01 3.484509e-02 3.956729e-01 4.624486e-01 1.000860e-01 1.424516e-01 3.243906e-02 4.410497e-22 0.81951616 0.65107033 3.889980e-01 0.16061123 0.10985557 4.330848e-01 0.169961612 0.029789594 5.010445e-02 0.4325543 0.18053425 -0.7130721 1 0.6734524 0.8222818 -0.6712767 0.7118581 0.32423758 0.24967108 0.208897524 -0.240051967 0.6734524 1 0.3144453 -0.26615339 0.7980647 0.55325422 0.042836587 0.0224213307 -0.0581280521 0.8222818 0.3144453 1 -0.7190898 0.2981358 0.22405040 0.123570039 0.085448422 -0.115454952 -0.6712767 -0.26615339 -0.7190898 1 -0.23699317 -0.17668885 -0.113919894 -0.094153774 0.099621180 0.7118581 0.7980647 0.2981358 -0.23699317 1 0.2720870 0.071975103 0.085238188 -0.0881534891 0.32423758 0.55325422 0.22405040 -0.17668885 0.2720870 1 -0.001202863 -0.035876099 -0.0105628392 0.24967108 0.042836587 0.123570039 -0.113919894 0.071975103 -0.001202863 1 0.823168369 -0.91442828 0.208897524 0.0224213307 0.085448422 -0.094153774 0.085238188 -0.035876099 0.823168369 1 -0.7994324 -0.240051967 -0.0581280521 -0.115454952 0.099621180 -0.0881534891 -0.0105628392 -0.91442828 -0.7994324 1 both 0.2820292 0.2276228 0.28202923 0.054878049 0.30298720 0.25000000 0.2871883 0.07012195 0.2394366 0.9273159 0.61166761 0.020874036 0.245440234 0.2976819 0.404636183 1163 164 164 868 623 0.6044712 0.04733441 0.5616411275 1.0 13.0 12.0 0.06189931 2.370957e-01 0.0019583522 0.05298720 4.158225e-01 3.4823070 0.7024936 0.8222472 0.4903793 0.7033534 0.5027238 100 50 0.4040545 0.7356912 0.7644484 0.7685419 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.089423904 0.05674979 0.7381320 0.7602193 1.0000000 0.9160040 0.9444146 1.0000000 0.13798009 0.15869565 0.6997655 0.8188077 0.8575802 0.6745486 0.40312538 0.08687045 0.03461070 0.02015994 0.01219732 0.6036113 0.8384146 0.5113772 0.00 6.0 16.00 NA NA NA 86665 Bacillus halodurans 0.7742253 0.6503990 0.7565175 0.5331959 0.4012354 1.018785e-02 1.031536e-10 0.185711912 0.010404675 0.18080425 0.0268585266 3.642144e-87 1.184705e-88 2.580512e-57 2.265330e-90 6.732708e-42 2.107341e-46 6.072139e-05 6.496562e-05 1.952699e-41 1.559585e-08 3.096745e-07 6.729737e-08 3.707693e-01 1.478257e-02 4.836255e-03 7.050369e-03 1.803589e-12 3.642144e-87 0.41911160 0.54844683 1.603178e-02 0.49526571 0.58551510 3.096745e-07 0.023342256 0.017484891 1.292396e-11 0.5969809 0.40548004 -0.6079628 1 0.9366304 0.5629360 -0.5502616 0.7890073 0.66308187 0.17974673 0.139503436 -0.175240103 0.9366304 1 0.3059636 -0.31217245 0.8214970 0.67986784 0.087830233 0.0678084197 -0.0868901384 0.5629360 0.3059636 1 -0.8703530 0.2975677 0.24813840 0.070406523 0.026798510 -0.079491962 -0.5502616 -0.31217245 -0.8703530 1 -0.31502371 -0.25769560 -0.071079113 -0.034327397 0.081086280 0.7890073 0.8214970 0.2975677 -0.31502371 1 0.5980438 0.091309869 0.072105465 -0.0857188541 0.66308187 0.67986784 0.24813840 -0.25769560 0.5980438 1 0.055257355 0.051041157 -0.0465944055 0.17974673 0.087830233 0.070406523 -0.071079113 0.091309869 0.055257355 1 0.824548679 -0.88681298 0.139503436 0.0678084197 0.026798510 -0.034327397 0.072105465 0.051041157 0.824548679 1 -0.7984759 -0.175240103 -0.0868901384 -0.079491962 0.081086280 -0.0857188541 -0.0465944055 -0.88681298 -0.7984759 1 both 0.3218466 0.2986084 0.30429129 0.042424242 0.31825038 0.21698113 0.5864759 0.33939394 0.5263158 0.6534946 0.04347163 0.203217061 0.180041820 0.5753887 -0.150777426 3076 495 495 3148 918 0.8621586 0.07211005 0.0446663110 4.5 63.0 58.5 0.14634025 3.171385e-07 0.0328941889 0.10457398 6.741415e-04 2.5163291 0.4005202 0.6591710 0.4958737 0.3982445 0.4881273 152 76 0.7764391 0.3485636 0.7988811 0.8005540 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.069570871 0.02080624 0.5671259 0.6010933 0.6079137 0.6335987 0.6700096 0.6546763 0.08597285 0.11792453 0.6745283 0.7087119 0.7218634 0.6274367 0.44947955 0.33443490 0.39148794 0.40755983 0.31008710 0.3745124 0.5801282 0.2845794 0.00 17.0 61.00 NA NA NA 90370 Salmonella enterica subsp. enterica serovar Typhi 0.5997725 0.5199091 0.7210466 0.5974799 0.5810404 5.744050e-01 3.949586e-02 0.478442388 0.259018799 0.44236365 0.2081935526 2.985984e-68 1.445326e-77 1.383275e-35 7.378244e-67 5.143695e-12 4.266019e-29 5.967037e-16 1.978408e-13 6.433357e-38 3.328690e-12 9.755901e-06 2.318660e-05 2.176296e-04 6.839287e-01 9.434953e-10 2.275995e-08 4.301855e-13 2.985984e-68 -0.03167177 -0.02654252 8.888791e-10 1.25717144 0.97888813 9.755901e-06 -0.570790539 -0.216825824 2.616623e-11 0.6303680 0.34211812 -0.2914965 1 0.7272191 0.8651980 -0.8278160 0.6463808 0.47728701 0.26498293 0.225403468 -0.280615816 0.7272191 1 0.3730076 -0.35970557 0.7872000 0.69135417 0.105677035 0.1280283336 -0.1303930304 0.8651980 0.3730076 1 -0.9196894 0.3144750 0.25071590 0.155822046 0.077298926 -0.159928444 -0.8278160 -0.35970557 -0.9196894 1 -0.29936427 -0.21946053 -0.156814890 -0.081727555 0.171984734 0.6463808 0.7872000 0.3144750 -0.29936427 1 0.5725914 0.085334144 0.115608292 -0.1090141932 0.47728701 0.69135417 0.25071590 -0.21946053 0.5725914 1 0.032320033 0.025841159 -0.0355606612 0.26498293 0.105677035 0.155822046 -0.156814890 0.085334144 0.032320033 1 0.704358197 -0.77791652 0.225403468 0.1280283336 0.077298926 -0.081727555 0.115608292 0.025841159 0.704358197 1 -0.7318827 -0.280615816 -0.1303930304 -0.159928444 0.171984734 -0.1090141932 -0.0355606612 -0.77791652 -0.7318827 1 both 0.3868728 0.2725094 0.33070369 0.117455139 0.34124629 0.31211857 0.4190596 0.19168026 0.3556314 0.8083655 0.41706008 0.080306288 0.258447064 0.4189596 0.162080773 3169 613 613 2636 1759 0.6380562 0.04094585 0.1717915013 -12.0 42.0 54.0 0.05351120 3.025515e-02 0.0000000000 0.05700417 1.719541e-02 2.0416477 0.5680025 0.6964970 0.4624562 0.5711581 0.4630780 158 79 0.3879067 0.6600367 0.7357518 0.7461509 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.094351530 0.05301357 0.6785305 0.7134001 0.7194861 0.9448947 0.9637157 0.9978587 0.15133531 0.14036617 0.8242827 0.9167710 0.9358222 0.7565541 0.55577204 0.25230922 0.18985164 0.12140065 0.05749387 0.4443042 0.6593511 0.3380481 0.00 10.0 41.00 NA NA NA 99287 Salmonella typhimurium LT2 0.5933498 0.5174284 0.7083801 0.5733169 0.5585930 1.840683e-02 6.361062e-01 0.422242070 0.260805356 0.39588865 0.1863445317 3.107207e-87 9.259804e-90 2.917786e-39 1.450673e-78 1.770376e-17 9.479313e-42 1.681911e-10 2.375432e-09 1.672901e-43 6.934791e-08 1.315103e-04 4.017642e-01 3.048538e-05 6.565012e-01 6.170723e-05 1.484095e-04 6.338100e-13 3.107207e-87 0.30634162 0.30004492 5.912050e-05 0.76216878 0.68425205 1.315103e-04 -0.239015653 -0.099898246 3.835971e-12 0.6073523 0.35366823 -0.3721056 1 0.7678113 0.8632958 -0.8267592 0.7043940 0.50323811 0.25750538 0.226066847 -0.277235742 0.7678113 1 0.4191988 -0.39960460 0.8196945 0.69961625 0.136146145 0.1262504985 -0.1379440368 0.8632958 0.4191988 1 -0.9403888 0.3540650 0.28008479 0.101573184 0.064841719 -0.150197858 -0.8267592 -0.39960460 -0.9403888 1 -0.33432089 -0.25357473 -0.105747193 -0.066691322 0.153184407 0.7043940 0.8196945 0.3540650 -0.33432089 1 0.5403996 0.128421754 0.125820714 -0.1220928979 0.50323811 0.69961625 0.28008479 -0.25357473 0.5403996 1 0.059443118 0.061030953 -0.0594868169 0.25750538 0.136146145 0.101573184 -0.105747193 0.128421754 0.059443118 1 0.948510390 -0.88948362 0.226066847 0.1262504985 0.064841719 -0.066691322 0.125820714 0.061030953 0.948510390 1 -0.7519272 -0.277235742 -0.1379440368 -0.150197858 0.153184407 -0.1220928979 -0.0594868169 -0.88948362 -0.7519272 1 both 0.4116714 0.2883182 0.35141135 0.106317411 0.36815671 0.32271945 0.4414843 0.18489985 0.3666592 0.8151325 0.35580883 0.081616079 0.278252142 0.4414070 0.117186076 3153 649 649 2641 1810 0.6314621 0.04623776 0.0867794192 -12.0 39.0 51.0 0.05646666 1.857365e-02 0.0093655892 0.05892566 1.224768e-02 2.6255508 0.5502696 0.6809665 0.4701785 0.5477323 0.4640568 156 78 0.4657636 0.6406788 0.7392603 0.7484326 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.094196004 0.04662226 0.6793416 0.7131293 0.6621622 0.9559339 0.9669540 0.9977477 0.14163737 0.13941480 0.8512452 0.9400530 0.9480600 0.6739102 0.47104939 0.26455976 0.18714441 0.12579434 0.05424424 0.4421186 0.6787004 0.3139364 -3.00 10.5 36.50 NA NA NA 100226 Streptomyces coelicolor A3(2) 0.5612354 0.5074995 0.6352503 0.4148887 0.4083306 4.315986e-01 4.384903e-20 0.478820974 0.396701781 0.46445246 0.2163448150 2.737022e-63 9.120623e-61 1.252388e-13 1.917609e-16 8.389072e-28 6.285848e-15 1.187074e-29 6.896221e-26 7.152661e-66 6.678939e-02 3.675190e-04 9.890094e-02 5.264032e-01 4.717723e-01 2.155339e-23 3.003453e-22 7.459794e-38 2.737022e-63 0.61697023 0.40166082 8.500013e-01 0.05623093 0.02744096 3.675190e-04 0.465373610 0.065626266 1.081170e-36 0.8142334 0.43954961 -0.5296860 1 0.6144729 0.7774569 -0.7468498 0.5223658 0.37143138 0.29950417 0.275746931 -0.278496767 0.6144729 1 0.1873716 -0.18518957 0.5719711 0.77000918 0.084874996 0.0962730736 -0.0610571207 0.7774569 0.1873716 1 -0.9010233 0.1752876 0.06622359 0.068600454 0.040136938 -0.092221622 -0.7468498 -0.18518957 -0.9010233 1 -0.18230961 -0.06220958 -0.070557425 -0.041104446 0.097390586 0.5223658 0.5719711 0.1752876 -0.18230961 1 0.3459396 0.097424117 0.112253903 -0.0619989580 0.37143138 0.77000918 0.06622359 -0.06220958 0.3459396 1 0.030304471 0.046185989 -0.0156040814 0.29950417 0.084874996 0.068600454 -0.070557425 0.097424117 0.030304471 1 0.907898927 -0.87491981 0.275746931 0.0962730736 0.040136938 -0.041104446 0.112253903 0.046185989 0.907898927 1 -0.7282521 -0.278496767 -0.0610571207 -0.092221622 0.097390586 -0.0619989580 -0.0156040814 -0.87491981 -0.7282521 1 both 0.5741827 0.2196964 0.12678122 0.026277372 0.13919156 0.10845874 0.4501257 0.33175182 0.4069489 0.5639276 0.28095922 0.196287416 0.057550902 0.5916694 -0.183338875 4772 1372 1368 4216 3296 0.5961861 0.03392709 0.1419934524 6.0 67.0 61.0 0.05517888 1.831383e-03 0.0000000000 0.03073282 2.279715e-01 1.2060568 0.3732188 0.5858076 0.4056084 0.3675608 0.3999645 200 100 0.4809406 0.4353673 0.5667028 0.5746586 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.178331936 0.02095557 0.4933157 0.5550970 0.3522608 0.7474857 0.7645340 0.9684543 0.19648506 0.20342501 0.7527082 0.8103557 0.7931280 0.5353943 0.43029854 0.32945229 0.40432494 0.38273983 0.24495409 0.3755239 0.6198347 0.3400528 -3.00 6.0 62.00 NA NA NA 103690 Nostoc sp. PCC 7120 0.5318673 0.5020311 0.6339918 0.4197879 0.4179832 9.572152e-01 2.525833e-02 0.257955023 0.096020573 0.24215072 0.1008430152 1.080199e-35 2.072440e-47 1.000000e+00 2.475893e-35 3.351919e-05 2.102087e-11 1.179535e-08 3.182564e-03 1.317000e-43 8.548235e-14 1.000000e+00 8.984332e-07 3.289523e-01 7.752265e-01 4.352127e-08 1.127898e-02 5.337399e-32 1.080199e-35 -0.12874451 -0.08964378 8.548235e-14 1.07818479 0.51500842 NA NA NA 2.023976e-28 0.8644022 0.43986923 -0.4298333 1 0.7683087 0.6828820 -0.6828820 0.5201053 NA 0.29760440 0.302911829 -0.252175140 0.7683087 1 0.1756311 -0.17563109 0.5955977 NA 0.085144661 0.0916823541 -0.0736199851 0.6828820 0.1756311 1 -1.0000000 0.1604408 NA 0.137818198 0.151682707 -0.100768201 -0.6828820 -0.17563109 -1.0000000 1 -0.16044084 NA -0.137818198 -0.151682707 0.100768201 0.5201053 0.5955977 0.1604408 -0.16044084 1 NA 0.040846520 0.040459356 -0.0500938645 NA NA NA NA NA NA NA NA NA 0.29760440 0.085144661 0.137818198 -0.137818198 0.040846520 NA 1 0.937282837 -0.91125265 0.302911829 0.0916823541 0.151682707 -0.151682707 0.040459356 NA 0.937282837 1 -0.7817857 -0.252175140 -0.0736199851 -0.100768201 0.100768201 -0.0500938645 NA -0.91125265 -0.7817857 1 both 0.5773075 0.2252891 0.14403292 0.039714868 0.16034206 0.12410189 0.2104644 0.05397149 0.1531867 0.8507477 0.30262236 0.031412310 0.147639813 0.5820168 -0.164033520 3402 984 980 2854 2512 0.5499706 0.03056274 0.4111446099 -6.0 121.0 127.0 0.03310070 3.147890e-01 0.0000000000 0.03624017 2.187422e-01 2.0262308 0.3568489 0.6101325 0.4452386 0.3703704 0.4450066 170 85 0.4655191 0.3560686 0.5418109 0.5638920 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.035567313 0.01058201 0.5171557 0.6219682 0.3949045 0.7910497 0.8323450 0.9554140 0.04329236 0.04964076 0.8502515 0.8215798 0.7983447 0.6946784 0.64155395 0.57048341 0.45493121 0.37942807 0.28325356 0.1916520 0.2775510 0.1771978 23.00 85.0 141.00 NA NA NA 107806 Buchnera aphidicola str. APS (Acyrthosiphon pisum) 0.6347518 0.5363161 0.7411348 0.6258286 0.5960056 7.201000e-01 1.750844e-01 -0.003768905 -0.044962114 0.02955412 -0.0681244766 1.418241e-23 2.595006e-25 1.415745e-19 4.296513e-25 8.947330e-04 5.226840e-07 1.589285e-01 4.419321e-01 2.976354e-13 3.232774e-03 4.045710e-02 6.644151e-03 2.254735e-01 6.747744e-01 3.530475e-01 7.093333e-01 7.660507e-03 1.418241e-23 0.06071813 0.07465822 2.260277e-02 1.24515326 1.44668170 4.045710e-02 -0.227753967 -0.222195397 1.654734e-02 0.4382797 0.36309796 -0.4214795 1 0.9216449 0.7170575 -0.7218943 0.8523080 0.77742642 0.12193642 0.082223641 -0.096937094 0.9216449 1 0.4207036 -0.43096850 0.9350223 0.82392890 0.082183341 0.0464659380 -0.0584275765 0.7170575 0.4207036 1 -0.9668222 0.3886429 0.36645954 0.058225661 0.081897289 -0.067885308 -0.7218943 -0.43096850 -0.9668222 1 -0.39579250 -0.37677697 -0.036556663 -0.070151944 0.071736168 0.8523080 0.9350223 0.3886429 -0.39579250 1 0.7909692 0.078076426 0.063842213 -0.0760331815 0.77742642 0.82392890 0.36645954 -0.37677697 0.7909692 1 0.071684993 0.056545457 -0.0873902509 0.12193642 0.082183341 0.058225661 -0.036556663 0.078076426 0.071684993 1 0.354724730 -0.46164342 0.082223641 0.0464659380 0.081897289 -0.070151944 0.063842213 0.056545457 0.354724730 1 -0.7970005 -0.096937094 -0.0584275765 -0.067885308 0.071736168 -0.0760331815 -0.0873902509 -0.46164342 -0.7970005 1 both 0.3492823 0.4064783 0.57655502 0.205479452 0.56338028 0.60447761 0.4019139 0.04794521 0.3102837 0.9518066 0.35690731 0.020095694 0.361722488 0.4047205 0.190558978 418 73 73 358 206 0.6794258 0.10673744 0.2507440318 -18.0 49.0 67.0 0.09354635 4.030502e-01 -0.0175692470 0.08834349 4.761035e-01 1.7723354 0.5980861 0.9025063 0.5063215 0.5933014 0.4866740 100 50 0.7356255 0.5234686 0.7960256 0.7970914 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.031100478 0.02870813 0.8894716 0.7330862 0.8400000 0.9812613 0.8959041 0.9600000 0.05281690 0.07462687 0.9024826 0.9110746 0.9147234 0.8332434 0.50005206 0.25441085 0.19993445 0.19386380 0.19623688 0.3349282 0.4688797 0.1525424 6.75 22.5 68.00 NA NA NA 111955 Sulfolobus tokodaii 0.5212314 0.5009015 0.6065110 0.3496833 0.3488814 0.000000e+00 0.000000e+00 0.738696500 -0.504516365 0.75321499 -0.5586340665 1.497272e-21 2.806124e-34 2.915115e-22 1.093105e-21 1.437702e-14 2.039096e-17 0.000000e+00 0.000000e+00 4.341214e-22 1.561611e-14 2.719072e-11 7.040713e-02 7.921801e-05 6.755149e-07 0.000000e+00 6.109774e-317 3.874566e-10 1.497272e-21 0.03269347 0.02060933 9.727510e-05 0.78147401 0.38988363 2.719072e-11 0.108212110 0.041843797 2.645396e-07 0.6316308 0.27703775 -0.2202772 1 0.7983221 0.8433833 -0.7647171 0.5518459 0.66168409 0.28601807 0.280058511 -0.171106922 0.7983221 1 0.4131665 -0.37260734 0.6122146 0.65877174 0.200164069 0.2106020707 -0.1009230300 0.8433833 0.4131665 1 -0.8649134 0.3269436 0.39607867 0.118785256 0.124648722 -0.088410838 -0.7647171 -0.37260734 -0.8649134 1 -0.28924390 -0.37244683 -0.089228155 -0.100329986 0.065431539 0.5518459 0.6122146 0.3269436 -0.28924390 1 0.3900248 0.134747761 0.156347992 -0.0717653867 0.66168409 0.65877174 0.39607867 -0.37244683 0.3900248 1 0.118416736 0.119261093 -0.0641497020 0.28601807 0.200164069 0.118785256 -0.089228155 0.134747761 0.118416736 1 0.848118738 -0.61310412 0.280058511 0.2106020707 0.124648722 -0.100329986 0.156347992 0.119261093 0.848118738 1 -0.3181109 -0.171106922 -0.1009230300 -0.088410838 0.065431539 -0.0717653867 -0.0641497020 -0.61310412 -0.3181109 1 both 0.6487748 0.2359011 0.14177363 0.035071942 0.16048035 0.12030075 0.5571762 0.40287770 0.4964614 0.5291953 0.12200417 0.262321173 0.032533851 0.6511186 -0.302237250 1714 552 560 1473 1353 0.5344224 0.03795789 0.5705899090 -3.0 29.0 32.0 0.04133149 4.599549e-01 0.0023542558 0.04498419 3.539946e-01 0.5487384 0.3868145 0.5298758 0.5602080 0.3757293 0.5661576 100 50 0.5981337 0.5000984 0.6838588 0.6907580 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.110268378 0.02042007 0.5418758 0.4686952 0.6160714 0.8224152 0.7583935 0.8571429 0.12991266 0.13157895 0.8237544 0.8905968 0.8738504 0.6338992 0.50291742 0.32868430 0.22234579 0.17468088 0.11432520 0.4095683 0.7242798 0.3575799 -10.00 -3.0 2.00 NA NA NA 115711 Chlamydophila pneumoniae AR39 0.5836331 0.5139890 0.7248201 0.6100586 0.5984921 8.117172e-02 7.834861e-03 0.240253442 0.114195970 0.26297103 0.0881473482 8.021287e-16 1.747122e-13 1.387782e-04 7.020634e-15 1.241516e-03 2.544990e-05 1.080412e-03 7.358370e-05 5.426820e-13 3.953547e-04 7.058988e-02 9.843408e-02 8.420624e-02 3.192179e-01 1.776531e-02 6.895326e-04 4.829349e-04 8.021287e-16 7.69638693 0.47642518 2.310404e-03 1.19171975 0.32398687 7.058988e-02 -0.111223077 -0.022347173 6.058520e-04 0.6638514 0.45500840 -6.8108053 1 0.7114799 0.8316419 -0.8024964 0.5972907 0.51732518 0.33951181 0.215844088 -0.201598793 0.7114799 1 0.3308027 -0.32197444 0.6475957 0.64722765 0.149808396 0.1536525838 -0.1416986922 0.8316419 0.3308027 1 -0.8840405 0.3014486 0.35445430 0.160985014 0.075958157 -0.075186866 -0.8024964 -0.32197444 -0.8840405 1 -0.27661705 -0.35029038 -0.168551623 -0.070837886 0.082428970 0.5972907 0.6475957 0.3014486 -0.27661705 1 0.3433950 0.110079658 0.170606988 -0.1244238451 0.51732518 0.64722765 0.35445430 -0.35029038 0.3433950 1 0.123714578 0.093686683 -0.1371159852 0.33951181 0.149808396 0.160985014 -0.168551623 0.110079658 0.123714578 1 0.507311814 -0.50663151 0.215844088 0.1536525838 0.075958157 -0.070837886 0.170606988 0.093686683 0.507311814 1 -0.8023016 -0.201598793 -0.1416986922 -0.075186866 0.082428970 -0.1244238451 -0.1371159852 -0.50663151 -0.8023016 1 both 0.3796526 0.2393522 0.16625310 0.013071895 0.17373737 0.15434084 0.2047146 0.02941176 0.1564748 0.9423146 0.50998867 0.011809056 0.181096529 0.4015079 0.196984207 806 153 153 649 463 0.6141439 0.09107149 0.0841444164 6.0 36.0 30.0 0.04063139 9.107660e-01 -0.0039720293 0.04247621 8.809751e-01 4.1250941 0.5235732 0.7402299 0.2452753 0.5186104 0.2487049 100 50 0.3442568 0.6747069 0.7248434 0.7309545 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.062034739 0.01240695 0.6273660 0.6824067 0.8000000 0.8625600 0.8885815 0.9666667 0.06262626 0.09324759 0.8447947 0.8307715 0.8310214 0.7084991 0.30432300 0.11330832 0.08175680 0.08382242 0.09855173 0.4193548 0.7164179 0.3601190 -6.00 6.0 20.00 NA NA NA 115713 Chlamydophila pneumoniae CWL029 0.5759013 0.5115220 0.7172676 0.5969278 0.5872246 4.534285e-02 1.258741e-11 0.342154808 0.158232838 0.35428825 0.1496225193 1.997032e-15 3.060247e-13 3.647712e-04 1.931537e-12 2.054607e-03 1.559799e-04 1.519605e-04 4.973469e-05 6.900797e-13 1.681330e-04 2.904584e-02 2.230674e-01 9.069722e-02 1.829079e-01 6.857173e-03 8.755452e-04 2.927701e-04 1.997032e-15 6.46022037 0.44701522 2.108052e-03 1.26991772 0.32135028 2.904584e-02 0.032624997 0.006462394 2.486164e-04 0.6747240 0.44762960 -5.6957305 1 0.7399903 0.8362790 -0.7733043 0.6166853 0.49770621 0.27690921 0.142978887 -0.121803939 0.7399903 1 0.3859708 -0.37755540 0.6657125 0.61991262 0.101657299 0.1117134267 -0.0889658471 0.8362790 0.3859708 1 -0.8261085 0.3227615 0.40830304 0.156124743 0.041537041 -0.054213689 -0.7733043 -0.37755540 -0.8261085 1 -0.28860062 -0.40461801 -0.133010244 -0.021591184 0.043748058 0.6166853 0.6657125 0.3227615 -0.28860062 1 0.3284411 0.090158824 0.180148313 -0.1256371224 0.49770621 0.61991262 0.40830304 -0.40461801 0.3284411 1 0.083423163 0.018741716 -0.0512687934 0.27690921 0.101657299 0.156124743 -0.133010244 0.090158824 0.083423163 1 0.268993187 -0.23409827 0.142978887 0.1117134267 0.041537041 -0.021591184 0.180148313 0.018741716 0.268993187 1 -0.7726203 -0.121803939 -0.0889658471 -0.054213689 0.043748058 -0.1256371224 -0.0512687934 -0.23409827 -0.7726203 1 both 0.3941799 0.2521173 0.17724868 0.016778523 0.20131291 0.14046823 0.2261905 0.04026846 0.1736243 0.9265140 0.48804768 0.016621829 0.192946819 0.4127754 0.174449180 756 149 149 607 447 0.6044974 0.05786612 0.5803815504 -11.0 33.0 44.0 0.06634076 4.040221e-01 -0.0008173768 0.08046515 1.923844e-01 7.6721048 0.5291005 0.7149777 0.2958291 0.5291005 0.3042156 100 50 0.3537343 0.6678448 0.7234773 0.7266077 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.066137566 0.01322751 0.6081002 0.6532656 0.8666667 0.8052126 0.8350288 0.9500000 0.07658643 0.08361204 0.7934630 0.7760304 0.7819916 0.7559757 0.44604189 0.14400082 0.07052160 0.07181656 0.08629056 0.4351852 0.7238806 0.3729904 -3.00 8.0 22.00 NA NA NA 119072 Thermoanaerobacter tengcongensis 0.8670788 0.7694937 0.8446677 0.6293350 0.3860992 3.682071e-06 1.181614e-04 0.368566844 0.121810777 0.35840633 0.1254705209 8.530201e-49 9.182738e-48 1.000000e+00 1.877424e-47 1.999983e-18 8.259552e-25 1.405667e-06 3.183510e-08 5.117386e-20 2.102433e-01 1.000000e+00 1.613244e-01 8.941723e-01 7.995565e-01 2.189519e-04 3.197160e-05 7.983402e-06 8.530201e-49 0.58754685 0.78794726 2.102433e-01 0.50971200 0.60302548 NA NA NA 6.403277e-06 0.6509140 0.50776549 -1.1733743 1 0.8778632 0.6900100 -0.6776409 0.8296868 NA 0.15798129 0.123051794 -0.146666922 0.8778632 1 0.3549268 -0.34798459 0.8707643 NA 0.059417479 0.0800258608 -0.0756376093 0.6900100 0.3549268 1 -0.9284977 0.3808533 NA 0.077157184 0.042324406 -0.067060585 -0.6776409 -0.34798459 -0.9284977 1 -0.36465428 NA -0.088731064 -0.058707655 0.081401229 0.8296868 0.8707643 0.3808533 -0.36465428 1 NA 0.097495655 0.044490160 -0.0833782344 NA NA NA NA NA NA NA NA NA 0.15798129 0.059417479 0.077157184 -0.088731064 0.097495655 NA 1 0.456282274 -0.58832139 0.123051794 0.0800258608 0.042324406 -0.058707655 0.044490160 NA 0.456282274 1 -0.7633730 -0.146666922 -0.0756376093 -0.067060585 0.081401229 -0.0833782344 NA -0.58832139 -0.7633730 1 both 0.1838975 0.2587187 0.34354986 0.039800995 0.34818805 0.27777778 0.3833486 0.05721393 0.3326893 0.9083767 0.06141922 0.035123680 0.313101221 0.5901100 -0.180219913 2186 201 201 2244 344 0.9341263 0.10084068 0.1296609101 10.0 29.0 19.0 0.08844134 2.434187e-01 0.0000000000 0.07205626 4.872801e-01 1.6436322 0.3705398 0.7854850 0.1976050 0.3714547 0.2162022 108 54 0.8522347 0.3838255 0.8550017 0.8551108 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.064043916 0.01326624 0.6038660 0.5836039 0.6094675 0.6574139 0.6361370 0.6094675 0.07443683 0.11805556 0.6985452 0.7164785 0.7185989 0.6181980 0.46225714 0.27707264 0.19091898 0.13401280 0.08835177 0.4821592 0.7057257 0.3651568 -3.00 12.0 24.00 NA NA NA 122586 Neisseria meningitidis MC58 0.5646946 0.5083708 0.7364117 0.6364959 0.6298751 1.577444e-06 0.000000e+00 0.477658384 0.061544883 0.45941880 -0.0138684747 4.178215e-22 1.235167e-24 4.801294e-02 2.211252e-25 2.409467e-03 1.421687e-10 7.933834e-24 2.957274e-20 1.299776e-14 1.776580e-06 2.169355e-06 8.426563e-06 9.107405e-10 1.125130e-04 2.257300e-21 3.944422e-14 1.643959e-05 4.178215e-22 0.58317878 0.42883429 3.216406e-04 0.49100843 0.25920714 2.169355e-06 1.858271905 0.176527638 1.183513e-03 0.5165525 0.23334607 -2.5479344 1 0.7086498 0.8174422 -0.8177921 0.5789202 -0.01518798 0.30094213 0.186378456 -0.261649353 0.7086498 1 0.2589368 -0.25906377 0.7229089 -0.22660425 0.145236951 0.0804253771 -0.1204605363 0.8174422 0.2589368 1 -0.9962433 0.2160320 0.04846201 0.151492855 0.076885760 -0.135564778 -0.8177921 -0.25906377 -0.9962433 1 -0.21502436 -0.04902630 -0.154736539 -0.079582508 0.141821739 0.5789202 0.7229089 0.2160320 -0.21502436 1 0.3553803 0.157953289 0.052222065 -0.1789302113 -0.01518798 -0.22660425 0.04846201 -0.04902630 0.3553803 1 0.046416066 -0.038963517 -0.1030810749 0.30094213 0.145236951 0.151492855 -0.154736539 0.157953289 0.046416066 1 0.628699728 -0.67152985 0.186378456 0.0804253771 0.076885760 -0.079582508 0.052222065 -0.038963517 0.628699728 1 -0.7271483 -0.261649353 -0.1204605363 -0.135564778 0.141821739 -0.1789302113 -0.1030810749 -0.67152985 -0.7271483 1 both 0.3579360 0.2323382 0.21619856 0.071167883 0.23359288 0.19145570 0.2397126 0.08576642 0.1991342 0.8675736 0.55493071 0.031744285 0.176224036 0.3701249 0.259750292 1531 274 274 1174 905 0.5871979 0.04493213 0.4419630770 1.0 69.0 68.0 0.04641057 4.009839e-01 0.0000000000 0.04618880 4.069835e-01 3.0095058 0.5930764 0.7654498 0.4435413 0.5715219 0.4337886 100 50 0.4084847 0.4498752 0.5848087 0.5938527 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.056825604 0.01763553 0.6982223 0.7799989 0.8859649 0.9260557 0.9488217 1.0000000 0.08453838 0.06012658 0.8582786 0.8622980 0.8612491 0.7245824 0.47219551 0.35188150 0.33418700 0.24274496 0.13480339 0.3344219 0.5317221 0.2800000 4.00 25.0 90.00 NA NA NA 122587 Neisseria meningitidis Z2491 0.5549637 0.5060420 0.7365617 0.6383643 0.6335909 4.686359e-01 2.270649e-01 0.486899189 0.109028641 0.44584866 -0.0121167279 2.297343e-22 5.550286e-25 4.308173e-01 2.022480e-22 3.529973e-02 3.254380e-09 1.435769e-22 1.239955e-22 2.689687e-14 3.328038e-06 6.033192e-04 1.330379e-02 4.111327e-05 3.512625e-03 2.927122e-19 1.126764e-16 3.369600e-05 2.297343e-22 0.53821596 0.37170497 5.356551e-05 0.60569838 0.31558133 6.033192e-04 2.538541138 0.115823335 1.031763e-03 0.5258391 0.23894549 -3.3420022 1 0.7004327 0.8356405 -0.8159399 0.5809230 0.01433860 0.29969307 0.222633469 -0.332445850 0.7004327 1 0.2988549 -0.29562807 0.7147292 -0.17525656 0.088038564 0.0559365567 -0.1374718248 0.8356405 0.2988549 1 -0.9518757 0.2083624 -0.01197704 0.155436289 0.101891141 -0.183987492 -0.8159399 -0.29562807 -0.9518757 1 -0.19304803 0.03080126 -0.150926501 -0.101041221 0.181498606 0.5809230 0.7147292 0.2083624 -0.19304803 1 0.3407198 0.128508236 0.066214536 -0.1665338620 0.01433860 -0.17525656 -0.01197704 0.03080126 0.3407198 1 0.063318908 0.010537142 -0.0550325338 0.29969307 0.088038564 0.155436289 -0.150926501 0.128508236 0.063318908 1 0.747625240 -0.81158380 0.222633469 0.0559365567 0.101891141 -0.101041221 0.066214536 0.010537142 0.747625240 1 -0.7435571 -0.332445850 -0.1374718248 -0.183987492 0.181498606 -0.1665338620 -0.0550325338 -0.81158380 -0.7435571 1 both 0.3576594 0.2285180 0.21499014 0.068014706 0.22107675 0.20679012 0.2485207 0.08639706 0.2058111 0.8726196 0.55454204 0.031656668 0.185207374 0.3664091 0.267181807 1521 272 272 1146 919 0.5739645 0.02895507 0.9141200754 -4.0 62.0 66.0 0.04838043 3.487653e-01 0.0000000000 0.02793687 9.336397e-01 2.3947851 0.6239316 0.7479495 0.4869623 0.6002630 0.4563052 100 50 0.3942942 0.4777934 0.5908696 0.6085363 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.055884287 0.01972387 0.6908287 0.7866578 0.9217391 0.9143756 0.9494341 1.0000000 0.07789233 0.07253086 0.7836187 0.8418716 0.8595700 0.7434125 0.48856302 0.41320388 0.31494116 0.22306928 0.10991009 0.3451677 0.5321101 0.2939698 4.00 25.0 87.00 NA NA NA 138677 Chlamydophila pneumoniae J138 0.5762395 0.5116249 0.7212348 0.6047848 0.5950885 3.171128e-02 2.310436e-11 0.330303535 0.165739135 0.34195713 0.1487978548 2.905075e-15 3.024321e-13 2.858825e-03 6.357632e-13 4.005157e-03 3.180578e-04 5.840752e-04 1.418267e-05 3.261490e-14 6.898766e-04 2.076972e-01 5.563946e-02 6.251788e-02 1.272158e-01 1.973235e-02 2.182720e-04 3.203464e-05 2.905075e-15 6.46546607 0.40677452 1.576193e-03 1.42815253 0.32818789 2.076972e-01 -0.134974572 -0.019379153 2.977979e-05 0.7365476 0.54461425 -5.8967144 1 0.7024084 0.8231206 -0.7692633 0.6053136 0.44967315 0.29633967 0.129752623 -0.106436583 0.7024084 1 0.3255809 -0.31651194 0.6586170 0.52271273 0.086749257 0.1182832614 -0.0832371703 0.8231206 0.3255809 1 -0.8277136 0.3069403 0.34480902 0.152367826 0.035843394 -0.035356426 -0.7692633 -0.31651194 -0.8277136 1 -0.27448133 -0.35413491 -0.145132493 -0.015644043 0.027487523 0.6053136 0.6586170 0.3069403 -0.27448133 1 0.3331803 0.047856268 0.175842262 -0.1201790287 0.44967315 0.52271273 0.34480902 -0.35413491 0.3331803 1 0.080923667 0.025888368 -0.0693488688 0.29633967 0.086749257 0.152367826 -0.145132493 0.047856268 0.080923667 1 0.226445808 -0.25812527 0.129752623 0.1182832614 0.035843394 -0.015644043 0.175842262 0.025888368 0.226445808 1 -0.7799506 -0.106436583 -0.0832371703 -0.035356426 0.027487523 -0.1201790287 -0.0693488688 -0.25812527 -0.7799506 1 both 0.3865110 0.2487294 0.17380026 0.016778523 0.19742489 0.13770492 0.2204929 0.03355705 0.1683817 0.9383761 0.49798557 0.013587633 0.193317600 0.4049115 0.190177073 771 149 149 616 453 0.6044099 0.06249912 0.4674891263 -15.0 30.0 45.0 0.06783227 3.644229e-01 -0.0037298250 0.07892071 2.010403e-01 7.6274360 0.5304799 0.7164093 0.2781068 0.5291829 0.2741521 100 50 0.3490375 0.6775141 0.7233500 0.7262837 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.063553826 0.01426719 0.6121818 0.6354992 0.8500000 0.8199279 0.8501631 0.9500000 0.07725322 0.07868852 0.8119309 0.7935106 0.8012541 0.7526297 0.40152820 0.12527784 0.07936729 0.08662667 0.09869749 0.4306096 0.7313433 0.3673469 -3.00 8.0 22.00 NA NA NA 155864 Escherichia coli O157:H7 EDL933 0.5847107 0.5143518 0.7265214 0.6129555 0.6013301 1.455659e-01 7.870873e-01 0.434006657 0.267841095 0.40636029 0.1883393957 5.844125e-68 2.029834e-76 1.987138e-36 5.752857e-74 9.068528e-08 1.242489e-33 5.292182e-13 2.058747e-17 7.196684e-50 2.424818e-13 1.219700e-07 1.594125e-11 1.151590e-09 4.688623e-01 1.367605e-06 3.661727e-10 9.852220e-25 5.844125e-68 0.23744249 0.19854584 7.872270e-08 0.90325162 0.63522720 1.219700e-07 -0.325163441 -0.103369280 1.120277e-22 0.7687166 0.44995332 -0.5809074 1 0.6835023 0.8989059 -0.8307946 0.6185176 0.48627622 0.26363688 0.211024333 -0.289916562 0.6835023 1 0.3797798 -0.34775406 0.7276274 0.62242494 0.161337497 0.1722915981 -0.1783726755 0.8989059 0.3797798 1 -0.9085165 0.3495457 0.30721314 0.124101736 0.058412591 -0.161548811 -0.8307946 -0.34775406 -0.9085165 1 -0.30887093 -0.26189323 -0.113963637 -0.037086343 0.153746656 0.6185176 0.7276274 0.3495457 -0.30887093 1 0.5823385 0.142928911 0.173763117 -0.1551810338 0.48627622 0.62242494 0.30721314 -0.26189323 0.5823385 1 0.084582884 0.085958002 -0.0861212944 0.26363688 0.161337497 0.124101736 -0.113963637 0.142928911 0.084582884 1 0.694099468 -0.71513431 0.211024333 0.1722915981 0.058412591 -0.037086343 0.173763117 0.085958002 0.694099468 1 -0.7461252 -0.289916562 -0.1783726755 -0.161548811 0.153746656 -0.1551810338 -0.0861212944 -0.71513431 -0.7461252 1 both 0.3764219 0.2648829 0.28179938 0.099587912 0.27726510 0.28908356 0.3968459 0.17239011 0.3354621 0.8268176 0.45297040 0.068726744 0.259392426 0.3986699 0.202660240 3868 727 729 3113 2211 0.6163392 0.02211170 0.7624624433 -5.0 45.0 50.0 0.05481399 8.204248e-03 0.0000000000 0.03426821 2.330265e-01 1.8944841 0.5710962 0.6988451 0.3993468 0.5695450 0.4069722 192 96 0.3492989 0.6673231 0.7384170 0.7485973 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.087383661 0.04265770 0.7025210 0.7618266 0.7912525 0.9721137 0.9832308 0.9980119 0.13045302 0.12938005 0.8652409 0.9515426 0.9623172 0.7878601 0.52256921 0.26707443 0.18552526 0.10068492 0.03334038 0.4105481 0.6532110 0.3153348 0.00 10.0 36.50 NA NA NA 158878 Staphylococcus aureus subsp. aureus Mu50 0.7450258 0.6200753 0.7546057 0.5728260 0.4692486 6.871579e-01 4.304472e-06 0.301472411 0.154384860 0.29423419 0.1327387373 9.636605e-58 1.739309e-57 5.200945e-40 1.729487e-57 9.978616e-18 2.501706e-27 7.226350e-04 5.332262e-04 2.059770e-25 1.601482e-03 7.990222e-04 1.520333e-03 1.916623e-03 1.231908e-01 4.084997e-02 2.281287e-02 3.455871e-05 9.636605e-58 0.62745309 0.70989160 3.360163e-01 0.24854740 0.25849372 7.990222e-04 0.255818555 0.192603343 2.235955e-05 0.5086945 0.31805607 -0.6719232 1 0.8432365 0.7300987 -0.7192734 0.8022933 0.65635637 0.21619755 0.184931354 -0.224320302 0.8432365 1 0.3403428 -0.32959391 0.8479661 0.82694792 0.093471875 0.0695078862 -0.0992387555 0.7300987 0.3403428 1 -0.9752321 0.3244336 0.24030236 0.103471588 0.091131906 -0.144221976 -0.7192734 -0.32959391 -0.9752321 1 -0.31173246 -0.22489629 -0.104726345 -0.092555750 0.144225705 0.8022933 0.8479661 0.3244336 -0.31173246 1 0.6484121 0.101043974 0.090328006 -0.1099534813 0.65635637 0.82694792 0.24030236 -0.22489629 0.6484121 1 0.053269479 0.007494997 -0.0372945908 0.21619755 0.093471875 0.103471588 -0.104726345 0.101043974 0.053269479 1 0.694516475 -0.80619233 0.184931354 0.0695078862 0.091131906 -0.092555750 0.090328006 0.007494997 0.694516475 1 -0.7590136 -0.224320302 -0.0992387555 -0.144221976 0.144225705 -0.1099534813 -0.0372945908 -0.80619233 -0.7590136 1 both 0.3251953 0.2875360 0.36474609 0.084084084 0.38684834 0.26111111 0.4702148 0.18318318 0.3997789 0.7932334 0.18169346 0.097224729 0.275765386 0.5307514 -0.061502776 2048 333 333 2022 692 0.8242188 0.06753555 0.1334740263 -25.0 47.0 72.0 0.14129805 1.430480e-05 0.0197191773 0.12573723 1.684265e-04 3.6937090 0.4277344 0.6908761 0.4510297 0.4384766 0.4456641 102 51 0.6358345 0.4696890 0.6760639 0.6809611 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.051269531 0.03222656 0.6254966 0.6450176 0.6432749 0.8107738 0.8146569 0.8771930 0.07997630 0.10000000 0.7859066 0.8171748 0.8165942 0.6373064 0.51597187 0.40620526 0.33788456 0.24551477 0.17554135 0.4257812 0.6157965 0.3166795 0.00 13.0 39.75 NA NA NA 158879 Staphylococcus aureus subsp. aureus N315 0.7478797 0.6228887 0.7471087 0.5480918 0.4408981 3.286097e-01 5.823592e-06 0.264987933 0.125248916 0.27576305 0.1081633046 3.687725e-63 4.799543e-62 2.288610e-43 3.012000e-59 6.554460e-20 1.923884e-28 4.187110e-04 1.790561e-04 4.170462e-28 3.107313e-03 6.178378e-04 2.336051e-01 2.029493e-03 1.566449e-01 2.199717e-02 6.060973e-03 1.133177e-05 3.687725e-63 0.72862839 0.85433264 6.550993e-01 0.10179219 0.11637755 6.178378e-04 0.320493186 0.254230218 6.439305e-06 0.5073875 0.33744258 -0.6500289 1 0.9063101 0.6722494 -0.6667847 0.8321518 0.72633194 0.19148923 0.164331798 -0.189452397 0.9063101 1 0.3519099 -0.34645083 0.8619272 0.80702164 0.081139053 0.0640844698 -0.0817131062 0.6722494 0.3519099 1 -0.9680230 0.3491397 0.27884523 0.133793224 0.101995754 -0.143286022 -0.6667847 -0.34645083 -0.9680230 1 -0.33798803 -0.26815392 -0.137278305 -0.108437440 0.149164973 0.8321518 0.8619272 0.3491397 -0.33798803 1 0.6638980 0.091119431 0.084005708 -0.0929798631 0.72633194 0.80702164 0.27884523 -0.26815392 0.6638980 1 0.046408292 0.015006135 -0.0338686057 0.19148923 0.081139053 0.133793224 -0.137278305 0.091119431 0.046408292 1 0.749095145 -0.85945655 0.164331798 0.0640844698 0.101995754 -0.108437440 0.084005708 0.015006135 0.749095145 1 -0.7642132 -0.189452397 -0.0817131062 -0.143286022 0.149164973 -0.0929798631 -0.0338686057 -0.85945655 -0.7642132 1 both 0.3384933 0.3081121 0.38390093 0.080792683 0.41651148 0.22324159 0.5025800 0.20274390 0.4267540 0.7744548 0.10388120 0.113354509 0.275870962 0.5591019 -0.118203877 1938 328 328 1940 654 0.8312693 0.06190810 0.2484822347 -25.0 51.0 76.0 0.18267758 2.642236e-08 0.0566922948 0.19326989 3.032271e-09 4.8720869 0.4205366 0.6705982 0.4317198 0.4226006 0.4436695 100 50 0.7265669 0.4556938 0.7583591 0.7598179 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.052631579 0.03405573 0.5780456 0.6355911 0.6428571 0.7014276 0.7423357 0.6785714 0.08566108 0.09174312 0.7504330 0.7647577 0.7656526 0.6556354 0.53239835 0.40562807 0.32218919 0.23689858 0.17247612 0.4220846 0.6196237 0.2989950 0.00 13.0 37.00 NA NA NA 160488 Pseudomonas putida KT2440 0.5551402 0.5060809 0.6844860 0.5329905 0.5276997 1.411935e-01 1.243656e-05 0.519546325 0.338858743 0.45132229 0.1810077592 1.255703e-92 1.741083e-99 4.476577e-48 3.177761e-97 4.500660e-25 2.163594e-41 6.646061e-22 1.283711e-25 3.126717e-54 9.423616e-17 4.543514e-13 1.361583e-11 1.299765e-02 7.530163e-02 2.119080e-15 2.702889e-18 6.276012e-23 1.255703e-92 0.54409385 0.53159570 3.391248e-07 0.41991666 0.33803244 4.543514e-13 0.295584725 0.130909394 1.072377e-20 0.7083114 0.42652898 -0.6952997 1 0.7897528 0.8074879 -0.7640261 0.6847515 0.54874037 0.21984499 0.179875700 -0.225575772 0.7897528 1 0.3554292 -0.33197209 0.7679547 0.74030392 0.110148684 0.1159290462 -0.0998172673 0.8074879 0.3554292 1 -0.9333636 0.2996894 0.23969534 0.099902564 0.036591842 -0.123871528 -0.7640261 -0.33197209 -0.9333636 1 -0.27968220 -0.21891325 -0.096927552 -0.034092558 0.123715244 0.6847515 0.7679547 0.2996894 -0.27968220 1 0.4900866 0.105894003 0.117433008 -0.1017246942 0.54874037 0.74030392 0.23969534 -0.21891325 0.4900866 1 0.045540368 0.062726691 -0.0304571181 0.21984499 0.110148684 0.099902564 -0.096927552 0.105894003 0.045540368 1 0.833242645 -0.80563931 0.179875700 0.1159290462 0.036591842 -0.034092558 0.117433008 0.062726691 0.833242645 1 -0.7337271 -0.225575772 -0.0998172673 -0.123871528 0.123715244 -0.1017246942 -0.0304571181 -0.80563931 -0.7337271 1 both 0.4609503 0.2942061 0.30857455 0.084715640 0.34352941 0.26024723 0.4617695 0.20971564 0.3822430 0.7855018 0.30652103 0.099048753 0.263672018 0.4723003 0.055399459 3662 843 845 2970 2380 0.5802840 0.03834085 0.1452282498 -9.0 37.0 46.0 0.08115458 1.580742e-05 0.0441189744 0.09081496 8.163445e-07 2.9870308 0.5368651 0.6558055 0.5255517 0.5379574 0.5248467 182 91 0.4923436 0.5537060 0.6805371 0.6883185 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.129710541 0.03222283 0.6583354 0.6624448 0.6509275 0.9200255 0.9169478 0.9949410 0.16611765 0.15614834 0.7719088 0.9005991 0.9060992 0.6428833 0.44784521 0.28692135 0.28137574 0.17138660 0.06583872 0.4341890 0.6442478 0.3404423 -3.00 9.0 46.75 NA NA NA 160490 Streptococcus pyogenes M1 GAS 0.8049499 0.6859889 0.8102534 0.6451815 0.4884062 5.305877e-01 1.532773e-01 0.340414184 0.137317465 0.34075278 0.1260001351 1.038457e-29 1.864715e-30 8.568570e-10 3.716624e-30 2.860674e-07 7.284626e-11 9.184124e-04 7.367339e-05 1.599606e-12 1.115505e-02 4.497264e-01 1.876823e-02 5.732058e-01 6.411371e-01 3.061231e-02 4.968896e-03 2.381593e-03 1.038457e-29 0.37152882 0.41848657 1.408086e-02 0.66943756 0.62697482 4.497264e-01 -0.005860919 -0.002477445 2.729818e-03 0.5558796 0.30700799 -0.8023986 1 0.8592656 0.7556491 -0.7541518 0.7861713 0.50952875 0.23569035 0.175417820 -0.200930548 0.8592656 1 0.3915633 -0.39329955 0.8876650 0.59222302 0.151868633 0.1334004969 -0.1306162812 0.7556491 0.3915633 1 -0.9480108 0.3253482 0.24019033 0.101333122 0.036246673 -0.094587957 -0.7541518 -0.39329955 -0.9480108 1 -0.33085502 -0.24502429 -0.090356381 -0.028224731 0.080648941 0.7861713 0.8876650 0.3253482 -0.33085502 1 0.6024660 0.133672112 0.115401337 -0.1198028888 0.50952875 0.59222302 0.24019033 -0.24502429 0.6024660 1 0.095641113 0.034198317 -0.0607219093 0.23569035 0.151868633 0.101333122 -0.090356381 0.133672112 0.095641113 1 0.581995431 -0.67474132 0.175417820 0.1334004969 0.036246673 -0.028224731 0.115401337 0.034198317 0.581995431 1 -0.7733467 -0.200930548 -0.1306162812 -0.094587957 0.080648941 -0.1198028888 -0.0607219093 -0.67474132 -0.7733467 1 both 0.2341818 0.2545103 0.47854545 0.204968944 0.47425249 0.50877193 0.5090909 0.26708075 0.4631703 0.7316062 0.23619884 0.136636848 0.235817213 0.5115938 -0.023187561 1375 160 162 1366 331 0.8756364 0.07515397 0.3662127590 -3.0 47.0 50.0 0.06588176 5.341418e-01 -0.0053829711 0.06337549 5.844689e-01 2.3738943 0.5410909 0.7718415 0.5652217 0.5214545 0.5685949 100 50 0.6042959 0.6035752 0.7173357 0.7270269 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.059636364 0.04290909 0.5902085 0.6474423 0.6099291 0.8151972 0.8281204 0.9219858 0.10548173 0.08187135 0.8295708 0.8331809 0.8319327 0.7617595 0.63590969 0.34381351 0.17765164 0.11129267 0.06322416 0.4327273 0.5759878 0.3012552 0.00 13.0 61.00 NA NA NA 160492 Xylella fastidiosa 9a5c 0.6005061 0.5202030 0.6832972 0.5152150 0.4974751 4.083507e-02 3.600119e-01 0.470962317 0.074110178 0.47995933 0.0516397626 4.193569e-47 1.434169e-52 1.039997e-32 2.112783e-47 1.969354e-23 2.131796e-29 5.165568e-23 2.799559e-27 4.001907e-31 3.461631e-10 1.181617e-09 3.463110e-05 6.773681e-01 8.175702e-03 7.173374e-20 2.449242e-20 1.477399e-08 4.193569e-47 0.50752334 0.58095600 5.695401e-03 0.44748040 0.36879624 1.181617e-09 0.237240826 0.119009065 2.510158e-06 0.5297293 0.37059960 -0.4982817 1 0.8270611 0.6286538 -0.5080338 0.7025283 0.74164968 0.39282698 0.146534426 -0.286688787 0.8270611 1 0.2330189 -0.17728334 0.7567879 0.90344461 0.276259058 -0.0018578718 -0.1534742097 0.6286538 0.2330189 1 -0.7852114 0.1896506 0.22182479 0.011079167 0.084037379 -0.117477266 -0.5080338 -0.17728334 -0.7852114 1 -0.15384665 -0.17076151 -0.011795602 -0.082268097 0.121242098 0.7025283 0.7567879 0.1896506 -0.15384665 1 0.6165163 0.206578009 0.008320800 -0.1262048935 0.74164968 0.90344461 0.22182479 -0.17076151 0.6165163 1 0.287328942 -0.025975221 -0.1420820140 0.39282698 0.276259058 0.011079167 -0.011795602 0.206578009 0.287328942 1 0.192698792 -0.39015965 0.146534426 -0.0018578718 0.084037379 -0.082268097 0.008320800 -0.025975221 0.192698792 1 -0.7637596 -0.286688787 -0.1534742097 -0.117477266 0.121242098 -0.1262048935 -0.1420820140 -0.39015965 -0.7637596 1 both 0.4634921 0.2751948 0.24444444 0.049086758 0.25450082 0.22604790 0.5026455 0.26826484 0.4284165 0.7317995 0.26065788 0.134809759 0.233025985 0.5025249 -0.005049776 1890 438 438 1661 1105 0.6465608 0.03120192 0.7944146790 -6.5 47.0 53.5 0.04983241 2.337462e-01 0.0281350311 0.04370963 3.812614e-01 2.3542238 0.4698413 0.6447350 0.4504130 0.4513228 0.4411628 100 50 0.4795025 0.3432858 0.5471216 0.5787510 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.143386243 0.02328042 0.5688596 0.6155756 0.5015873 0.7415091 0.7951733 0.8412698 0.16202946 0.17514970 0.5345446 0.7566690 0.7669793 0.6102912 0.58459532 0.51176324 0.37646472 0.26938970 0.18938620 0.4116402 0.5281385 0.3739496 -2.25 24.0 95.00 NA NA NA 169963 Listeria monocytogenes EGD-e 0.7888264 0.6668414 0.7884751 0.6064096 0.4630360 1.338489e-01 7.122940e-01 0.229048325 0.082415791 0.23675970 0.0897006242 1.610370e-57 4.118148e-56 1.649051e-02 3.514364e-57 1.622431e-21 1.094867e-31 4.758858e-04 4.806692e-04 8.790998e-30 8.207200e-02 1.891707e-01 3.988186e-02 3.676815e-01 5.134527e-01 4.339479e-02 3.971690e-02 1.269043e-08 1.610370e-57 0.52706603 0.58816334 3.013551e-02 0.49729111 0.54689306 1.891707e-01 -0.848518660 -0.082151048 1.233508e-08 0.6322583 0.47762167 0.3343298 1 0.8998694 0.6746835 -0.6636550 0.8204653 0.12045264 0.21694103 0.188644130 -0.200863653 0.8998694 1 0.3516855 -0.34000893 0.8741472 0.02245590 0.124135230 0.1137883360 -0.1102587409 0.6746835 0.3516855 1 -0.9320781 0.3332003 0.13996120 0.088715764 0.068433701 -0.126335326 -0.6636550 -0.34000893 -0.9320781 1 -0.33123150 -0.16258526 -0.094787794 -0.070498967 0.129157228 0.8204653 0.8741472 0.3332003 -0.33123150 1 0.3167604 0.115858151 0.102123780 -0.1015202075 0.12045264 0.02245590 0.13996120 -0.16258526 0.3167604 1 -0.012127437 -0.024219766 0.0186654982 0.21694103 0.124135230 0.088715764 -0.094787794 0.115858151 -0.012127437 1 0.833945456 -0.80806017 0.188644130 0.1137883360 0.068433701 -0.070498967 0.102123780 -0.024219766 0.833945456 1 -0.7848330 -0.200863653 -0.1102587409 -0.126335326 0.129157228 -0.1015202075 0.0186654982 -0.80806017 -0.7848330 1 both 0.2682709 0.2848547 0.45632799 0.164451827 0.46525991 0.39867110 0.5084670 0.21262458 0.4458890 0.7754589 0.13984966 0.114171749 0.280123525 0.5369640 -0.073928013 2244 301 301 2245 601 0.8658645 0.07283151 0.1259287866 12.0 40.0 28.0 0.10414590 7.009232e-03 0.0094220107 0.10006275 1.082495e-02 2.5375808 0.4322638 0.7240581 0.4020473 0.4318182 0.4113777 112 56 0.6811719 0.4781479 0.7327774 0.7348903 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.077094474 0.02673797 0.6543906 0.6253474 0.6824034 0.8089231 0.7858861 0.8068670 0.10190427 0.11627907 0.7973826 0.8095520 0.8050924 0.5936735 0.41870884 0.22515328 0.22847779 0.23019024 0.22561643 0.4661319 0.6210938 0.3360656 -3.00 13.0 31.00 NA NA NA 170187 Streptococcus pneumoniae TIGR4 0.8042025 0.6850783 0.7994269 0.6140643 0.4542026 5.433378e-02 1.181113e-01 0.311140388 0.085753757 0.30271135 0.1098756434 4.083337e-38 6.679977e-39 5.125793e-11 2.189634e-37 5.334325e-12 8.383561e-20 2.823806e-04 1.184795e-03 9.018048e-19 1.010834e-02 1.014072e-02 1.370749e-01 2.571591e-01 8.816811e-01 1.314165e-01 9.722546e-02 1.598115e-04 4.083337e-38 0.37246905 0.38606024 6.302814e-02 0.52756175 0.58240493 1.014072e-02 0.323083925 0.105667232 8.037680e-05 0.5861393 0.39698677 -1.0566945 1 0.8852025 0.7542025 -0.7158617 0.8162328 0.50852261 0.32380414 0.306604096 -0.271888083 0.8852025 1 0.4079822 -0.37326840 0.8728610 0.63691489 0.211733295 0.2051770217 -0.1709446791 0.7542025 0.4079822 1 -0.9385080 0.4172927 0.16749227 0.165361081 0.151621608 -0.143520622 -0.7158617 -0.37326840 -0.9385080 1 -0.38681314 -0.12804588 -0.157162979 -0.149064199 0.139557447 0.8162328 0.8728610 0.4172927 -0.38681314 1 0.3842708 0.185890584 0.196076201 -0.1523997618 0.50852261 0.63691489 0.16749227 -0.12804588 0.3842708 1 0.097672939 0.094311429 -0.0666843106 0.32380414 0.211733295 0.165361081 -0.157162979 0.185890584 0.097672939 1 0.811660955 -0.82070246 0.306604096 0.2051770217 0.151621608 -0.149064199 0.196076201 0.094311429 0.811660955 1 -0.7852646 -0.271888083 -0.1709446791 -0.143520622 0.139557447 -0.1523997618 -0.0666843106 -0.82070246 -0.7852646 1 both 0.2508961 0.2693432 0.42054958 0.142857143 0.41887305 0.43283582 0.4450418 0.15714286 0.3872970 0.8072807 0.17105603 0.085768163 0.273505490 0.5457974 -0.091594805 1674 210 210 1684 410 0.8799283 0.04483692 0.8691570119 6.0 37.0 31.0 0.07188092 3.202490e-01 0.0000000000 0.03578847 9.772834e-01 1.4708804 0.4617682 0.7697135 0.5269565 0.4575866 0.5186718 100 50 0.6581369 0.5719916 0.7757842 0.7813886 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.051971326 0.03405018 0.6317397 0.7382668 0.7430556 0.8202745 0.8838712 0.8750000 0.08553971 0.08955224 0.8213288 0.8688821 0.8726149 0.6681952 0.53609033 0.23763900 0.14990630 0.10653206 0.05743049 0.4492234 0.6690341 0.2896907 -3.00 11.0 33.75 NA NA NA 171101 Streptococcus pneumoniae R6 0.7924621 0.6710681 0.8081253 0.6565347 0.5156050 5.426964e-02 3.328931e-01 0.306516953 0.054769806 0.29947618 0.0473189076 5.965934e-35 1.463699e-36 2.190322e-09 2.783692e-34 1.729160e-11 6.024245e-18 1.792287e-06 5.586110e-07 4.535955e-18 2.769460e-03 3.784059e-02 1.932937e-01 3.209885e-01 8.533906e-01 4.505906e-03 4.390771e-04 3.012059e-05 5.965934e-35 0.23267192 0.23309487 1.642139e-02 0.64699341 0.70694512 3.784059e-02 0.244034096 0.076632536 9.362937e-06 0.6492178 0.44091913 -1.0556424 1 0.8380313 0.8027616 -0.7833345 0.7817039 0.41147602 0.24978711 0.231345143 -0.237655608 0.8380313 1 0.3995467 -0.38285685 0.8562887 0.60757927 0.171292039 0.1661040370 -0.1461801426 0.8027616 0.3995467 1 -0.9663428 0.3935502 0.16665117 0.105000343 0.080782421 -0.121249365 -0.7833345 -0.38285685 -0.9663428 1 -0.37597174 -0.15012790 -0.091962360 -0.070335974 0.108972606 0.7817039 0.8562887 0.3935502 -0.37597174 1 0.3919044 0.164927112 0.170819208 -0.1370070810 0.41147602 0.60757927 0.16665117 -0.15012790 0.3919044 1 0.080888497 0.068691155 -0.0511890511 0.24978711 0.171292039 0.105000343 -0.091962360 0.164927112 0.080888497 1 0.924359866 -0.89961638 0.231345143 0.1661040370 0.080782421 -0.070335974 0.170819208 0.068691155 0.924359866 1 -0.7811472 -0.237655608 -0.1461801426 -0.121249365 0.108972606 -0.1370070810 -0.0511890511 -0.89961638 -0.7811472 1 both 0.2374319 0.2666036 0.42095700 0.153061224 0.42616034 0.38864629 0.4482132 0.15561224 0.3920705 0.8318260 0.25874053 0.075377790 0.297457624 0.4843950 0.031210041 1651 196 196 1619 424 0.8612962 0.05059299 0.6936366290 13.0 37.0 24.0 0.07205547 2.574050e-01 0.0000000000 0.04514522 8.162910e-01 2.3031295 0.5075712 0.7806432 0.4827577 0.5051484 0.4768911 100 50 0.5815629 0.6205389 0.7404794 0.7426231 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.056935191 0.03210176 0.6746927 0.7701098 0.7551020 0.9084515 0.9452550 0.9931973 0.08649789 0.10480349 0.8954654 0.9095773 0.8960666 0.6883317 0.52338321 0.18849689 0.14875022 0.12422825 0.07164379 0.4221684 0.6100719 0.2855649 -3.00 10.0 33.00 NA NA NA 176280 Staphylococcus epidermidis ATCC 12228 0.7395618 0.6147797 0.7205457 0.4814424 0.3810441 1.335661e-01 1.304451e-02 0.307474022 0.193716211 0.19582429 0.1084038191 5.002522e-69 1.363355e-72 1.622066e-54 7.103183e-69 1.349023e-29 1.535048e-34 6.225584e-02 3.825780e-02 1.215870e-28 8.190919e-07 2.218916e-06 8.507336e-03 3.042588e-01 4.106903e-02 5.829199e-01 5.571869e-01 2.054443e-03 5.002522e-69 0.47325621 0.59000185 7.705605e-02 0.41599592 0.48710586 2.218916e-06 0.218930858 0.193635230 2.578946e-03 0.3621996 0.24771556 -0.3920047 1 0.9313620 0.6826235 -0.6624522 0.8306141 0.77683766 0.19709113 0.179606866 -0.203939062 0.9313620 1 0.3957730 -0.37554183 0.8953558 0.83820675 0.115287888 0.1081493563 -0.1166403398 0.6826235 0.3957730 1 -0.9723645 0.3693414 0.31252027 0.099904253 0.071149722 -0.118387924 -0.6624522 -0.37554183 -0.9723645 1 -0.34701151 -0.30222610 -0.098789154 -0.071695323 0.116701565 0.8306141 0.8953558 0.3693414 -0.34701151 1 0.6901119 0.124000792 0.117961071 -0.1206183654 0.77683766 0.83820675 0.31252027 -0.30222610 0.6901119 1 0.089841226 0.078570912 -0.0947010784 0.19709113 0.115287888 0.099904253 -0.098789154 0.124000792 0.089841226 1 0.942845299 -0.92829716 0.179606866 0.1081493563 0.071149722 -0.071695323 0.117961071 0.078570912 0.942845299 1 -0.8104420 -0.203939062 -0.1166403398 -0.118387924 0.116701565 -0.1206183654 -0.0947010784 -0.92829716 -0.8104420 1 both 0.3878371 0.3340785 0.38668962 0.073964497 0.41103448 0.26621160 0.6144578 0.32840237 0.5345184 0.6691936 -0.07819412 0.203266574 0.207924683 0.5502545 -0.100509051 1743 340 336 1789 630 0.8318990 0.02649876 0.9955129499 -12.0 55.0 67.0 0.15942803 8.313721e-06 0.0492931004 0.14482288 7.254056e-05 4.5889596 0.4297189 0.6127238 0.6432648 0.4279977 0.6445914 100 50 0.7777370 0.5290288 0.8186170 0.8202115 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.048192771 0.03442341 0.6838815 0.6556993 0.7430556 0.8256073 0.7868043 0.8402778 0.08137931 0.08873720 0.8334014 0.8673191 0.8684418 0.6054949 0.45339472 0.34524321 0.27925125 0.24018601 0.21184008 0.4188181 0.6320475 0.2843779 0.00 13.0 44.00 NA NA NA 180835 Agrobacterium tumefaciens str. C58 (U. Washington) 0.5716738 0.5102743 0.6776824 0.5135090 0.5044259 8.425476e-03 5.720517e-01 0.253477923 0.033413232 0.27695354 0.0394095660 5.188620e-83 2.235724e-95 1.155589e-70 6.234566e-98 4.925242e-41 3.504500e-52 4.196103e-14 1.558317e-17 5.880616e-67 1.364722e-17 3.453232e-24 2.539200e-18 1.235986e-06 4.356581e-08 1.969190e-07 1.459658e-09 5.980225e-31 5.188620e-83 0.66399393 0.63679478 5.263982e-01 -0.13936371 -0.12067888 3.453232e-24 0.684709458 0.404871036 3.432802e-25 0.6950735 0.50020582 -0.6734926 1 0.8468179 0.7508873 -0.7507012 0.6464389 0.67542711 0.30918911 0.210129003 -0.273352584 0.8468179 1 0.3317957 -0.33148217 0.7288850 0.80078845 0.187945534 0.1478659947 -0.1653549852 0.7508873 0.3317957 1 -0.9997628 0.2658805 0.25983356 0.148387625 0.030864418 -0.123126637 -0.7507012 -0.33148217 -0.9997628 1 -0.26559528 -0.25953314 -0.148102126 -0.030524862 0.122660395 0.6464389 0.7288850 0.2658805 -0.26559528 1 0.5167246 0.111019307 0.149625486 -0.1331015959 0.67542711 0.80078845 0.25983356 -0.25953314 0.5167246 1 0.119781723 0.104556491 -0.1204625816 0.30918911 0.187945534 0.148387625 -0.148102126 0.111019307 0.119781723 1 0.570576002 -0.71413598 0.210129003 0.1478659947 0.030864418 -0.030524862 0.149625486 0.104556491 0.570576002 1 -0.7629416 -0.273352584 -0.1653549852 -0.123126637 0.122660395 -0.1331015959 -0.1204625816 -0.71413598 -0.7629416 1 both 0.4756175 0.3209684 0.27010766 0.062583222 0.28885400 0.24137931 0.4943002 0.21904128 0.4055794 0.7803942 0.23467862 0.108551174 0.277197842 0.4955741 0.008851894 3158 751 751 2664 1996 0.6051298 0.02622180 0.6772116127 0.0 54.0 54.0 0.06901797 1.509664e-03 0.0105775586 0.04747469 6.664462e-02 2.0952262 0.4971501 0.6631949 0.4847412 0.4993667 0.4859262 156 78 0.5845045 0.5290471 0.7047831 0.7147396 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.121595947 0.02881571 0.6745906 0.6558449 0.7284211 0.9215821 0.8900740 0.9600000 0.14652015 0.15637530 0.9382875 0.9303849 0.8975060 0.5977469 0.43211883 0.31975893 0.25732910 0.21308589 0.10648654 0.4091197 0.6072685 0.3357918 -3.00 12.0 71.00 NA NA NA 181661 Agrobacterium tumefaciens str. C58 (Cereon) 0.5756644 0.5114502 0.6938282 0.5479677 0.5380365 3.380581e-01 6.536359e-01 0.322077207 0.154926702 0.27695658 0.1118193111 2.005568e-72 1.664782e-78 4.660574e-54 5.883883e-75 4.447757e-27 1.193668e-39 8.692389e-07 1.294104e-08 6.669732e-61 4.503974e-12 3.699979e-16 2.903318e-07 1.439208e-02 1.693795e-04 1.631871e-03 1.224654e-04 3.744152e-29 2.005568e-72 0.70003106 0.61775514 6.532224e-01 -0.13395660 -0.10761093 3.699979e-16 0.614269594 0.343400031 1.152673e-25 0.7269883 0.50625221 -0.7294322 1 0.8096689 0.7570613 -0.7292449 0.6518685 0.62910482 0.29075768 0.227438108 -0.284817754 0.8096689 1 0.3100962 -0.29731568 0.7193066 0.80262637 0.159353956 0.1352394160 -0.1534909354 0.7570613 0.3100962 1 -0.9329003 0.2466733 0.25020845 0.122984840 0.039605604 -0.124167337 -0.7292449 -0.29731568 -0.9329003 1 -0.24158366 -0.23156662 -0.123021611 -0.038189845 0.125467845 0.6518685 0.7193066 0.2466733 -0.24158366 1 0.5058719 0.113447502 0.130968052 -0.1234975617 0.62910482 0.80262637 0.25020845 -0.23156662 0.5058719 1 0.107574386 0.098585217 -0.1124262978 0.29075768 0.159353956 0.122984840 -0.123021611 0.113447502 0.107574386 1 0.774928645 -0.83302694 0.227438108 0.1352394160 0.039605604 -0.038189845 0.130968052 0.098585217 0.774928645 1 -0.7758757 -0.284817754 -0.1534909354 -0.124167337 0.125467845 -0.1234975617 -0.1124262978 -0.83302694 -0.7758757 1 both 0.4412789 0.2977737 0.26210826 0.065279770 0.27679501 0.23928860 0.4618550 0.18723099 0.3777729 0.8127250 0.30228910 0.086493884 0.288867250 0.4619635 0.076072997 3159 697 697 2621 1932 0.6084204 0.03252010 0.4036604160 7.0 40.0 33.0 0.06267050 5.413875e-03 0.0037196168 0.03831481 2.191732e-01 1.7467549 0.5381450 0.6844651 0.4996795 0.5308642 0.4899878 156 78 0.5105339 0.4929932 0.6498353 0.6608599 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.140867363 0.02215891 0.6455835 0.6911787 0.6699029 0.8883350 0.8922982 0.9941748 0.16024974 0.16734034 0.8328582 0.8731117 0.8528856 0.5496604 0.39352740 0.33004877 0.30354523 0.20113323 0.08039519 0.3925293 0.5567633 0.3341913 -3.00 4.0 54.50 NA NA NA 182710 Oceanobacillus iheyensis 0.7551429 0.6301958 0.7520000 0.5514549 0.4379986 1.357242e-03 1.264520e-11 0.297516571 0.195821913 0.26690487 0.1231184193 2.019576e-77 1.411550e-83 3.584214e-61 1.696478e-77 1.244199e-31 1.231652e-38 5.404935e-07 3.047936e-07 2.514918e-32 1.296511e-10 6.524580e-10 3.392827e-04 6.934608e-01 1.854107e-01 1.575217e-04 6.090310e-05 4.302604e-07 2.019576e-77 0.42759606 0.49442261 4.251145e-02 0.47403608 0.50777438 6.524580e-10 0.170699721 0.142974737 1.464368e-06 0.5026071 0.31607620 -0.6115066 1 0.9292778 0.6890649 -0.6890443 0.7930742 0.76402379 0.08431965 0.066894885 -0.091192022 0.9292778 1 0.4016172 -0.40171003 0.8421744 0.82556700 0.053637035 0.0348445813 -0.0356040825 0.6890649 0.4016172 1 -0.9974823 0.3603898 0.31443069 0.018102967 0.029044043 -0.096073521 -0.6890443 -0.40171003 -0.9974823 1 -0.35989859 -0.31394506 -0.018724404 -0.032095765 0.097924444 0.7930742 0.8421744 0.3603898 -0.35989859 1 0.6441997 0.063788795 0.031383142 -0.0353580107 0.76402379 0.82556700 0.31443069 -0.31394506 0.6441997 1 0.027819409 0.011651802 -0.0039016466 0.08431965 0.053637035 0.018102967 -0.018724404 0.063788795 0.027819409 1 0.406903935 -0.47761142 0.066894885 0.0348445813 0.029044043 -0.032095765 0.031383142 0.011651802 0.406903935 1 -0.7503912 -0.091192022 -0.0356040825 -0.096073521 0.097924444 -0.0353580107 -0.0039016466 -0.47761142 -0.7503912 1 both 0.3297872 0.3070580 0.33776596 0.059907834 0.35597826 0.24292453 0.5208967 0.21428571 0.4448571 0.7688047 0.07833548 0.120428878 0.280038900 0.5516219 -0.103243775 2632 434 434 2643 857 0.8389058 0.10836239 0.0004711621 15.0 66.0 51.0 0.15169538 1.554342e-07 0.0822123824 0.11305373 2.250339e-04 2.5208164 0.4156535 0.6605785 0.4627931 0.4141337 0.4670978 130 65 0.7164864 0.4562929 0.7559971 0.7563567 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.049392097 0.02355623 0.6948922 0.7704906 0.7812500 0.8575014 0.8959406 0.8281250 0.06521739 0.11320755 0.8636072 0.8530530 0.8382700 0.6295246 0.52769955 0.34868469 0.24656410 0.21866958 0.21087681 0.3852584 0.6074241 0.2719449 0.00 15.0 39.00 NA NA NA 183190 Xylella fastidiosa Temecula1 0.5973451 0.5189521 0.7227139 0.6017578 0.5860949 9.148963e-02 9.644337e-02 0.443786568 0.154410344 0.43763571 0.1299194831 1.157891e-42 1.670212e-44 6.452904e-18 8.640178e-42 1.431263e-08 1.120402e-18 3.981326e-12 2.347882e-09 2.995505e-24 9.287453e-05 1.811721e-04 9.190853e-03 1.675512e-03 2.172555e-01 5.286020e-11 2.129545e-06 1.506467e-07 1.157891e-42 0.50104783 0.63305546 3.691484e-02 0.41075064 0.46036946 1.811721e-04 0.184872658 0.084575649 7.091904e-07 0.6598624 0.45756583 -0.6910453 1 0.8411322 0.6547830 -0.6173306 0.7530924 0.66766455 0.23906393 0.092275997 -0.163730355 0.8411322 1 0.3150304 -0.28273122 0.8016315 0.78982514 0.154728545 0.0098327035 -0.0815933475 0.6547830 0.3150304 1 -0.8422218 0.2300440 0.27273401 0.040427678 0.088677551 -0.100264779 -0.6173306 -0.28273122 -0.8422218 1 -0.20559255 -0.21865792 -0.055860310 -0.089497899 0.097423106 0.7530924 0.8016315 0.2300440 -0.20559255 1 0.5795539 0.149750116 0.005741974 -0.0754100276 0.66766455 0.78982514 0.27273401 -0.21865792 0.5795539 1 0.201537262 -0.040714935 -0.0591150553 0.23906393 0.154728545 0.040427678 -0.055860310 0.149750116 0.201537262 1 0.245205616 -0.44546755 0.092275997 0.0098327035 0.088677551 -0.089497899 0.005741974 -0.040714935 0.245205616 1 -0.7609393 -0.163730355 -0.0815933475 -0.100264779 0.097423106 -0.0754100276 -0.0591150553 -0.44546755 -0.7609393 1 both 0.3836735 0.2959047 0.33129252 0.093971631 0.34871245 0.30111524 0.4136054 0.15070922 0.3407080 0.8491816 0.40053023 0.062379319 0.288846804 0.4139051 0.172189745 1470 282 282 1215 819 0.6340136 0.04038563 0.6341113511 -1.0 62.5 63.5 0.08629561 1.243624e-02 0.0053437976 0.07198414 5.831840e-02 4.4038305 0.6877551 0.7177528 0.6369554 0.6816327 0.6179209 100 50 0.4228342 0.5600155 0.6367973 0.6371206 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.157142857 0.02244898 0.6441033 0.6707416 0.5606061 0.8022853 0.7925805 0.9583333 0.16952790 0.19702602 0.7154785 0.7380608 0.6970773 0.7404677 0.72771898 0.68675679 0.57055247 0.41542185 0.20301836 0.3911565 0.4989733 0.3377416 0.00 33.5 110.00 NA NA NA 186103 Streptococcus pyogenes MGAS8232 0.8075881 0.6892208 0.8048780 0.6249928 0.4623711 1.798909e-02 1.162797e-01 0.317954880 0.079484582 0.31013266 0.0772361062 4.006310e-32 2.517397e-33 3.652172e-12 2.001151e-30 1.098407e-08 8.451996e-11 1.109787e-04 1.052601e-04 7.051225e-16 2.956919e-03 2.734970e-01 9.218668e-01 5.620894e-01 2.831044e-01 1.003251e-02 1.417028e-02 9.364554e-05 4.006310e-32 0.34204977 0.38155918 5.244312e-03 0.64812760 0.63870686 2.734970e-01 -0.014498433 -0.006508284 1.452095e-04 0.6549224 0.42723910 -0.8399469 1 0.8990399 0.6735457 -0.6565497 0.7946454 0.55818536 0.23379186 0.185381908 -0.228549243 0.8990399 1 0.3724665 -0.36129239 0.8604768 0.63735257 0.143298786 0.1251607520 -0.1541327569 0.6735457 0.3724665 1 -0.8509259 0.2840879 0.20308739 0.081463522 0.036024372 -0.068882378 -0.6565497 -0.36129239 -0.8509259 1 -0.27462064 -0.21534627 -0.087733438 -0.036346589 0.091503821 0.7946454 0.8604768 0.2840879 -0.27462064 1 0.6177568 0.140377269 0.123428265 -0.1534898287 0.55818536 0.63735257 0.20308739 -0.21534627 0.6177568 1 0.105231027 0.050136850 -0.1098540638 0.23379186 0.143298786 0.081463522 -0.087733438 0.140377269 0.105231027 1 0.580279510 -0.68103069 0.185381908 0.1251607520 0.036024372 -0.036346589 0.123428265 0.050136850 0.580279510 1 -0.7828151 -0.228549243 -0.1541327569 -0.068882378 0.091503821 -0.1534898287 -0.1098540638 -0.68103069 -0.7828151 1 both 0.2424242 0.2634093 0.44713805 0.177777778 0.44308633 0.47727273 0.5003367 0.23611111 0.4487805 0.7462906 0.17806908 0.126940149 0.246456403 0.5376289 -0.075257729 1485 180 180 1490 355 0.8814815 0.09663866 0.1102782525 -19.0 35.0 54.0 0.04091864 9.574250e-01 -0.0037219731 0.07510504 3.456559e-01 2.6661079 0.4646465 0.7629795 0.5017161 0.4653199 0.5050419 100 50 0.6231626 0.4523906 0.6715771 0.6806838 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.074747475 0.04107744 0.4929152 0.6581045 0.5116279 0.6156444 0.7591718 0.6395349 0.11917494 0.09090909 0.7248727 0.6904062 0.6930025 0.7261922 0.61296506 0.37901927 0.28515836 0.18155581 0.08835425 0.4545455 0.5768072 0.3556638 0.00 13.0 60.50 NA NA NA 186497 Pyrococcus furiosus DSM 3638 0.5539952 0.5058310 0.6900726 0.5453788 0.5402783 4.347289e-01 3.168868e-02 0.428970045 0.277636108 0.26077536 0.1215221760 1.136767e-32 2.703273e-40 1.144562e-06 4.565533e-36 1.121892e-03 2.016942e-09 2.406647e-03 8.975376e-04 6.928186e-26 1.442930e-09 6.216004e-03 6.892163e-05 7.049650e-03 1.329576e-01 3.657635e-03 1.742541e-03 3.643112e-11 1.136767e-32 0.06189786 0.07818566 6.186968e-08 0.87566025 0.75826671 6.216004e-03 -0.081534369 -0.015650887 6.316144e-10 0.7017451 0.46397521 -0.4480947 1 0.7555937 0.8410668 -0.7279150 0.6393228 0.39211886 0.11256601 -0.016851221 -0.021476801 0.7555937 1 0.3551476 -0.30969271 0.6985496 0.40934693 -0.008290309 0.0041311573 -0.0005830356 0.8410668 0.3551476 1 -0.8155330 0.2843437 0.24251918 0.078361631 -0.024225157 -0.020138659 -0.7279150 -0.30969271 -0.8155330 1 -0.23646923 -0.17438182 -0.060081835 0.002853702 0.030019257 0.6393228 0.6985496 0.2843437 -0.23646923 1 0.2718254 0.028896532 -0.002317427 -0.0003090877 0.39211886 0.40934693 0.24251918 -0.17438182 0.2718254 1 0.057509065 -0.073679841 0.0447681779 0.11256601 -0.008290309 0.078361631 -0.060081835 0.028896532 0.057509065 1 0.020772469 -0.18381958 -0.016851221 0.0041311573 -0.024225157 0.002853702 -0.002317427 -0.073679841 0.020772469 1 -0.8066893 -0.021476801 -0.0005830356 -0.020138659 0.030019257 -0.0003090877 0.0447681779 -0.18381958 -0.8066893 1 both 0.4491228 0.2865767 0.20140351 0.023437500 0.18833536 0.21926910 0.4533333 0.22343750 0.3820823 0.7734138 0.34694645 0.102719060 0.247895213 0.4597217 0.080556665 1425 319 321 1144 921 0.5775439 0.04152218 0.5865770646 1.0 12.0 11.0 0.04517546 4.770124e-01 0.0000000000 0.04111447 5.992580e-01 -1.1654943 0.5670175 0.6264366 0.5608132 0.5663158 0.5684858 100 50 0.4724066 0.6284058 0.7093369 0.7128375 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.124210526 0.03228070 0.6666015 0.6611123 0.6591928 0.9339017 0.9053122 1.0000000 0.16160389 0.14950166 0.8315040 0.9171259 0.8788339 0.4891329 0.25277867 0.13692528 0.07281387 0.04747635 0.02704011 0.5298246 0.7839721 0.4657293 -3.00 3.0 11.00 NA NA NA 187410 Yersinia pestis KIM 0.5787286 0.5123964 0.6669927 0.4863059 0.4753473 2.241396e-01 9.545964e-01 0.259909809 -0.025028879 0.28500668 -0.0095601104 2.563315e-87 7.585291e-98 1.313940e-60 1.599739e-89 1.632708e-30 2.710975e-43 1.148939e-17 1.608061e-24 2.968072e-65 1.578693e-17 3.458582e-16 1.814532e-08 2.006267e-01 5.368114e-01 6.381677e-09 7.879149e-15 3.152304e-26 2.563315e-87 0.39814348 0.35380529 1.950234e-03 0.45209499 0.37337356 3.458582e-16 0.247688617 0.131900819 1.839864e-25 0.7187174 0.55618122 -0.5652252 1 0.9189272 0.6640452 -0.6006334 0.7304983 0.69988995 0.27188186 0.238878904 -0.275860844 0.9189272 1 0.3609169 -0.31722566 0.7824651 0.77706544 0.164166076 0.1585305888 -0.1727097455 0.6640452 0.3609169 1 -0.9078424 0.2994011 0.25644245 0.157185078 0.090151899 -0.166822057 -0.6006334 -0.31722566 -0.9078424 1 -0.27541965 -0.22476187 -0.136519498 -0.072137277 0.141780948 0.7304983 0.7824651 0.2994011 -0.27541965 1 0.6105179 0.134015411 0.155302010 -0.1412503538 0.69988995 0.77706544 0.25644245 -0.22476187 0.6105179 1 0.092779664 0.111416513 -0.1054486551 0.27188186 0.164166076 0.157185078 -0.136519498 0.134015411 0.092779664 1 0.796582954 -0.87275037 0.238878904 0.1585305888 0.090151899 -0.072137277 0.155302010 0.111416513 0.796582954 1 -0.7655229 -0.275860844 -0.1727097455 -0.166822057 0.141780948 -0.1412503538 -0.1054486551 -0.87275037 -0.7655229 1 both 0.4992669 0.3460059 0.33797654 0.096182085 0.35430267 0.31160115 0.5245601 0.23348018 0.4276284 0.7664786 0.15413771 0.122495997 0.279568123 0.5246527 -0.049305335 2728 667 695 2367 1723 0.6176686 0.04408363 0.1634344320 -8.0 63.0 71.0 0.04329954 1.784888e-01 0.0057887508 0.04932416 8.702262e-02 1.7579602 0.5095308 0.6289472 0.5700901 0.5153959 0.5818928 136 68 0.6341211 0.4137483 0.7239505 0.7335032 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.081378299 0.02859238 0.6855156 0.6985722 0.7466667 0.8656558 0.8371318 0.9233333 0.10682493 0.11505273 0.7685127 0.8315553 0.8314422 0.6528995 0.61176646 0.51471046 0.44252545 0.37925455 0.19720077 0.3434751 0.5032538 0.2619048 -3.00 14.0 85.50 NA NA NA 187420 Methanothermobacter thermautotrophicus str. Delta H 0.5792846 0.5125721 0.7479979 0.6553743 0.6457185 5.632337e-04 7.060827e-01 0.523695357 0.241339872 0.36193889 0.1331563588 4.319395e-31 3.220445e-32 1.000000e+00 2.318184e-30 1.188496e-11 4.231515e-18 1.324514e-05 1.483799e-03 2.244575e-25 2.316552e-02 1.000000e+00 2.382970e-01 5.527682e-02 3.590211e-02 3.808682e-04 8.597146e-03 3.959549e-10 4.319395e-31 -0.15779360 -0.15873530 2.316552e-02 1.02857147 0.96950823 NA NA NA 4.412632e-10 0.7183580 0.56468485 -0.5504019 1 0.6900294 0.8211120 -0.7730852 0.6747846 NA 0.20915169 0.155313463 -0.116245616 0.6900294 1 0.2660471 -0.23774365 0.7516414 NA 0.089065179 0.0555119828 -0.0447283676 0.8211120 0.2660471 1 -0.9048015 0.2673596 NA 0.124248270 0.086985481 -0.063451746 -0.7730852 -0.23774365 -0.9048015 1 -0.24982823 NA -0.097277477 -0.087287213 0.066448045 0.6747846 0.7516414 0.2673596 -0.24982823 1 NA 0.097373413 0.090507930 -0.0523271994 NA NA NA NA NA NA NA NA NA 0.20915169 0.089065179 0.124248270 -0.097277477 0.097373413 NA 1 0.585329537 -0.55125519 0.155313463 0.0555119828 0.086985481 -0.087287213 0.090507930 NA 0.585329537 1 -0.7760634 -0.116245616 -0.0447283676 -0.063451746 0.066448045 -0.0523271994 NA -0.55125519 -0.7760634 1 both 0.3369022 0.2658409 0.24910778 0.042372881 0.27004717 0.21699819 0.3540328 0.10593220 0.2915109 0.8939934 0.50964746 0.037529815 0.278973204 0.3542815 0.291437092 1401 236 236 1085 788 0.6052819 0.09893719 0.0028520167 -10.0 17.0 27.0 0.10092250 2.186720e-03 0.0263490719 0.05304898 3.029328e-01 -0.6028961 0.6266952 0.7335914 0.4625716 0.6316916 0.4701407 100 50 0.3314228 0.5908340 0.6637476 0.6669649 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.100642398 0.02426838 0.7076448 0.6271612 0.5942857 0.9167340 0.9154918 1.0000000 0.12028302 0.13200723 0.7637574 0.8514285 0.8802876 0.5030034 0.41509017 0.16935445 0.08801732 0.06924918 0.06388305 0.5467523 0.7478510 0.4800380 0.00 8.0 23.00 NA NA NA 188937 Methanosarcina acetivorans C2A 0.5281938 0.5015898 0.6674009 0.4998903 0.4984710 4.498876e-01 7.666589e-01 0.273006837 0.078474070 0.22921709 0.0557360449 2.278229e-65 3.546321e-63 4.482512e-14 7.342196e-42 1.326467e-24 4.325714e-33 2.152306e-07 3.321146e-06 1.564007e-43 5.589895e-04 4.053734e-03 2.991638e-01 1.460754e-01 1.294704e-05 2.330567e-07 2.289599e-05 3.036132e-20 2.278229e-65 0.42616367 0.57632207 1.535146e-02 0.33920291 0.24591183 4.053734e-03 0.259526504 0.062355423 1.953304e-19 0.7413229 0.41825997 -0.5363976 1 0.6368155 0.8713263 -0.8601878 0.5976956 0.37722145 0.12221972 0.104583842 -0.130083937 0.6368155 1 0.2980596 -0.28877692 0.6418849 0.56484421 0.068124248 0.0244314298 -0.0739148116 0.8713263 0.2980596 1 -0.9779500 0.3077966 0.17399272 0.055742581 0.068111077 -0.072566367 -0.8601878 -0.28877692 -0.9779500 1 -0.28856356 -0.16780305 -0.061200742 -0.077053345 0.082077088 0.5976956 0.6418849 0.3077966 -0.28856356 1 0.3619948 0.014431253 -0.020892765 -0.0189085991 0.37722145 0.56484421 0.17399272 -0.16780305 0.3619948 1 0.054754017 -0.030810257 -0.0461622579 0.12221972 0.068124248 0.055742581 -0.061200742 0.014431253 0.054754017 1 0.768068584 -0.80532222 0.104583842 0.0244314298 0.068111077 -0.077053345 -0.020892765 -0.030810257 0.768068584 1 -0.7987677 -0.130083937 -0.0739148116 -0.072566367 0.082077088 -0.0189085991 -0.0461622579 -0.80532222 -0.7987677 1 both 0.4983498 0.2546165 0.14422442 0.006622517 0.15103532 0.13616715 0.4607261 0.29867550 0.4068282 0.6748731 0.34776266 0.149794429 0.161137215 0.5015290 -0.003058037 3030 755 755 2398 2142 0.5419142 0.01631436 0.9881950055 -4.0 140.5 144.5 0.02182269 8.662553e-01 0.0000000000 0.01898384 9.491835e-01 0.2700026 0.4716172 0.6041351 0.4592122 0.4712871 0.4700194 150 75 0.3878933 0.4846001 0.5821729 0.5842577 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.066336634 0.01122112 0.6255447 0.6487416 0.4680851 0.8684893 0.8697866 1.0000000 0.07734470 0.07780980 0.8205920 0.8520325 0.8560151 0.7530832 0.67333369 0.60860730 0.55341116 0.46694399 0.27570664 0.2561056 0.5469108 0.2070960 -3.00 14.0 107.00 NA NA NA 189518 Leptospira interrogans serovar lai str. 56601 0.5790142 0.5124865 0.6555955 0.4588885 0.4477591 6.440389e-01 1.238424e-03 0.194498467 0.070908072 0.18278492 0.0906288339 2.485608e-46 1.670698e-12 1.000000e+00 2.232182e-46 5.873610e-45 7.404831e-45 2.110888e-04 1.252078e-07 3.040790e-41 6.372289e-09 1.000000e+00 5.226512e-01 1.932087e-12 3.993845e-10 3.793117e-03 1.347770e-05 2.378712e-19 2.485608e-46 23.81375881 0.65819221 6.372289e-09 0.83732570 0.13400055 NA NA NA 4.895434e-15 0.6903733 0.39065284 -13.4234185 1 0.6424102 0.8616086 -0.7809349 0.4951121 NA 0.35237899 0.155597766 -0.232150844 0.6424102 1 0.2834499 -0.25460408 0.6631209 NA 0.151799738 0.0484937351 -0.1043694248 0.8616086 0.2834499 1 -0.8374742 0.2530443 NA 0.138522521 0.058026885 -0.100318054 -0.7809349 -0.25460408 -0.8374742 1 -0.22906424 NA -0.131022776 -0.068240980 0.110869327 0.4951121 0.6631209 0.2530443 -0.22906424 1 NA 0.083233046 0.059518262 -0.0838375874 NA NA NA NA NA NA NA NA NA 0.35237899 0.151799738 0.138522521 -0.131022776 0.083233046 NA 1 0.365043519 -0.51253680 0.155597766 0.0484937351 0.058026885 -0.068240980 0.059518262 NA 0.365043519 1 -0.7947191 -0.232150844 -0.1043694248 -0.100318054 0.110869327 -0.0838375874 NA -0.51253680 -0.7947191 1 both 0.5253308 0.2201945 0.09196515 0.003071253 0.11035919 0.06196944 0.2439497 0.07862408 0.1870108 0.8220148 0.32700054 0.043419432 0.157110797 0.5522409 -0.104481809 3099 814 814 2737 1990 0.6198774 0.04699598 0.0794635627 -9.0 41.0 50.0 0.07591061 4.427652e-04 0.0000000000 0.04923864 5.798269e-02 2.2305520 0.4478864 0.6108089 0.4991162 0.4459503 0.4981434 154 77 0.4093330 0.5360726 0.6025220 0.6153290 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.109390126 0.01774766 0.5136476 0.5656471 0.3781726 0.7700904 0.8191765 0.9746193 0.12753774 0.12648557 0.7277442 0.8039025 0.8338794 0.6716934 0.47952142 0.24356648 0.19152652 0.15610641 0.12132532 0.3988383 0.7754386 0.3606965 -3.00 3.0 18.00 NA NA NA 190192 Methanopyrus kandleri AV19 0.5655009 0.5085807 0.6633076 0.4823975 0.4746775 3.351875e-01 9.947200e-01 0.480017170 0.324575477 0.55587156 0.3786739680 5.623725e-25 3.943905e-27 1.000000e+00 3.397368e-25 1.970027e-05 1.241901e-09 1.785726e-04 9.608691e-05 1.991413e-20 1.634655e-03 1.000000e+00 1.272998e-02 4.269629e-01 8.714136e-01 2.464617e-04 2.980717e-04 1.522008e-09 5.623725e-25 0.05476955 0.04888826 1.634655e-03 1.12567223 0.61787353 NA NA NA 1.160333e-08 0.7475404 0.48910378 -0.5464745 1 0.6494351 0.7793220 -0.4733293 0.6554717 NA 0.13429247 0.063932119 -0.082674299 0.6494351 1 0.1646339 -0.08955325 0.7319610 NA 0.035343496 0.0097980788 0.0021126187 0.7793220 0.1646339 1 -0.4828063 0.2343543 NA 0.052852331 0.056749790 -0.072033564 -0.4733293 -0.08955325 -0.4828063 1 -0.12906516 NA -0.071785676 -0.072703919 0.114315989 0.6554717 0.7319610 0.2343543 -0.12906516 1 NA 0.025088714 -0.005491128 0.0007816833 NA NA NA NA NA NA NA NA NA 0.13429247 0.035343496 0.052852331 -0.071785676 0.025088714 NA 1 0.307906221 -0.51313229 0.063932119 0.0097980788 0.056749790 -0.072703919 -0.005491128 NA 0.307906221 1 -0.6970274 -0.082674299 0.0021126187 -0.072033564 0.114315989 0.0007816833 NA -0.51313229 -0.6970274 1 both 0.5075961 0.2672373 0.19749777 0.028169014 0.22122571 0.16222222 0.3163539 0.10915493 0.2465916 0.8187424 0.31546319 0.057341537 0.201670814 0.5253225 -0.050644928 1119 284 284 954 733 0.5978552 0.08991530 0.0258093181 -1.5 13.0 14.5 0.11035376 2.852840e-03 0.0000000000 0.06979571 1.453788e-01 1.1340751 0.3798034 0.6117726 0.4164569 0.3798034 0.4177490 100 50 0.4666554 0.3495651 0.5449464 0.5453551 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.138516533 0.01072386 0.4726060 0.7053674 0.2754491 0.4798358 0.7277446 0.2754491 0.15994021 0.13333333 0.5364970 0.5130618 0.5299538 0.7416395 0.52649642 0.26076437 0.16976735 0.12380670 0.08606263 0.5433423 0.7104072 0.5022272 -1.50 13.0 20.50 NA NA NA 190304 Fusobacterium nucleatum subsp. nucleatum ATCC 25586 0.5882922 0.5155910 0.8064828 0.7541514 0.7446020 3.658511e-01 8.013570e-01 0.112158304 0.032594178 0.17949819 0.0366126076 3.301529e-34 5.644711e-37 1.000000e+00 3.966715e-34 2.961858e-19 3.863935e-23 1.442094e-06 1.969730e-06 8.951977e-16 3.349828e-04 1.000000e+00 6.051753e-01 1.397397e-04 1.360201e-03 1.130785e-05 2.414371e-05 4.878633e-04 3.301529e-34 0.12629540 0.17946677 3.349828e-04 0.96405922 1.14585870 NA NA NA 2.151747e-03 0.4712705 0.28216114 -0.7285529 1 0.6924286 0.8099800 -0.8108953 0.7036179 NA 0.09548865 0.064726903 -0.088529215 0.6924286 1 0.2472764 -0.25240775 0.7774501 NA 0.040167014 0.0514979149 -0.0526331664 0.8099800 0.2472764 1 -0.9941005 0.2619078 NA 0.024877741 0.007434626 -0.037153055 -0.8108953 -0.25240775 -0.9941005 1 -0.26169419 NA -0.025362951 -0.008098410 0.035366686 0.7036179 0.7774501 0.2619078 -0.26169419 1 NA 0.022116418 0.032187911 -0.0274744537 NA NA NA NA NA NA NA NA NA 0.09548865 0.040167014 0.024877741 -0.025362951 0.022116418 NA 1 0.472411053 -0.63231402 0.064726903 0.0514979149 0.007434626 -0.008098410 0.032187911 NA 0.472411053 1 -0.7792699 -0.088529215 -0.0526331664 -0.037153055 0.035366686 -0.0274744537 NA -0.63231402 -0.7792699 1 both 0.2399520 0.2436489 0.23275345 0.015000000 0.23349754 0.23159509 0.2555489 0.02250000 0.2104499 0.9775133 0.66465012 0.012777445 0.229994001 0.2624290 0.475141936 1667 200 200 1216 851 0.6088782 0.06385959 0.0784895409 6.0 29.0 23.0 0.03706821 6.464343e-01 -0.0106101224 0.02042371 9.964188e-01 0.6843321 0.6694661 0.8729235 0.3109377 0.6700660 0.3084059 100 50 0.4892511 0.6311535 0.6957340 0.6960024 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.038392322 0.03479304 0.7583790 0.8267536 1.0000000 0.9460331 0.9586784 1.0000000 0.07487685 0.07055215 0.8696265 0.8636672 0.8547902 0.6456246 0.43344157 0.16983794 0.09321186 0.07984894 0.08086177 0.4979004 0.7216495 0.4300235 0.00 13.0 31.00 NA NA NA 190485 Xanthomonas campestris pv. campestris str. ATCC 33913 0.5718728 0.5103314 0.7072471 0.5773041 0.5686000 2.062941e-01 4.150752e-01 0.466051484 0.363632999 0.38264474 0.2343555382 5.766176e-51 1.615321e-59 2.298994e-20 4.958735e-51 6.501012e-14 5.278702e-21 4.659508e-07 1.588361e-06 1.295294e-40 1.256084e-10 1.702763e-02 2.240629e-02 6.922043e-02 4.671289e-01 3.881066e-05 2.079029e-04 1.296129e-21 5.766176e-51 0.14830715 0.10783556 2.314805e-09 0.77695727 0.51165575 1.702763e-02 0.008187194 0.002525483 1.308756e-19 0.7928910 0.47530724 -0.6248336 1 0.7331247 0.8174788 -0.7500241 0.6164781 0.43008669 0.21190127 0.018961613 -0.115156333 0.7331247 1 0.2839381 -0.26098662 0.7003856 0.49653877 0.112721328 0.0336952916 -0.0933977284 0.8174788 0.2839381 1 -0.9154516 0.2422366 0.20166851 0.106764106 -0.031414512 -0.051112515 -0.7500241 -0.26098662 -0.9154516 1 -0.20624671 -0.16161110 -0.100228503 0.032894616 0.056060039 0.6164781 0.7003856 0.2422366 -0.20624671 1 0.4684605 0.125273491 0.029548510 -0.0697694694 0.43008669 0.49653877 0.20166851 -0.16161110 0.4684605 1 0.163442653 -0.061912846 0.0075736382 0.21190127 0.112721328 0.106764106 -0.100228503 0.125273491 0.163442653 1 0.184481003 -0.38936732 0.018961613 0.0336952916 -0.031414512 0.032894616 0.029548510 -0.061912846 0.184481003 1 -0.7498268 -0.115156333 -0.0933977284 -0.051112515 0.056060039 -0.0697694694 0.0075736382 -0.38936732 -0.7498268 1 both 0.4139330 0.2600970 0.25972269 0.084150327 0.28571429 0.22052587 0.3557660 0.13153595 0.2901220 0.8405002 0.41844834 0.056744603 0.242276773 0.4314000 0.137200071 2957 611 613 2391 1790 0.6012851 0.02183649 0.8879035558 -3.5 64.5 68.0 0.06731601 3.241648e-03 0.0000000000 0.07479456 7.183767e-04 2.6312366 0.5556307 0.6832530 0.4838297 0.5596889 0.4894559 146 73 0.3806987 0.4940342 0.6248010 0.6286752 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.145079472 0.02299628 0.6446437 0.6806874 0.6881288 0.9128154 0.9293307 0.9979879 0.16929134 0.16624258 0.7255298 0.8895294 0.9116229 0.7377430 0.55482945 0.45146406 0.40138630 0.29233661 0.16219009 0.3506933 0.5286458 0.2882595 -3.00 21.5 116.00 NA NA NA 190486 Xanthomonas axonopodis pv. citri str. 306 0.5684137 0.5093609 0.7068646 0.5773635 0.5694778 8.257821e-01 1.334239e-02 0.415963674 0.323407345 0.36262272 0.2255552630 4.043629e-57 3.944139e-61 1.374495e-21 5.665568e-56 1.162585e-15 3.692446e-25 2.881414e-06 1.815599e-07 3.681427e-38 1.190078e-07 4.642026e-03 9.755556e-02 3.555619e-02 6.077753e-01 3.562075e-04 1.128121e-04 1.058035e-16 4.043629e-57 0.33801578 0.25507753 7.179104e-06 0.64220920 0.42462696 4.642026e-03 0.060930211 0.019223657 4.501775e-16 0.7372495 0.41680908 -0.6529153 1 0.6891782 0.8358680 -0.7412236 0.6264113 0.41099781 0.20694693 0.115407454 -0.189194061 0.6891782 1 0.2733809 -0.24055027 0.7245447 0.53528686 0.075931690 0.0494367211 -0.0918181591 0.8358680 0.2733809 1 -0.8827174 0.2515349 0.17724997 0.107367713 0.005619492 -0.089080758 -0.7412236 -0.24055027 -0.8827174 1 -0.20667498 -0.11864656 -0.108003901 -0.020288351 0.097875769 0.6264113 0.7245447 0.2515349 -0.20667498 1 0.4382410 0.072048577 0.071091528 -0.0980532687 0.41099781 0.53528686 0.17724997 -0.11864656 0.4382410 1 0.111557522 -0.020647025 -0.0319399030 0.20694693 0.075931690 0.107367713 -0.108003901 0.072048577 0.111557522 1 0.507271150 -0.64158375 0.115407454 0.0494367211 0.005619492 -0.020288351 0.071091528 -0.020647025 0.507271150 1 -0.7574881 -0.189194061 -0.0918181591 -0.089080758 0.097875769 -0.0980532687 -0.0319399030 -0.64158375 -0.7574881 1 both 0.4146982 0.2528754 0.25787402 0.079905063 0.28272827 0.22113821 0.3645013 0.14082278 0.2989332 0.8336705 0.41794555 0.060627331 0.243246651 0.4305222 0.138955661 3048 633 631 2451 1861 0.5964567 0.03527865 0.3207317204 1.0 69.0 68.0 0.06452279 4.447407e-03 0.0000000000 0.06369100 5.200749e-03 2.5643325 0.5419948 0.6696874 0.4563760 0.5429790 0.4606014 152 76 0.3636844 0.4996926 0.6176318 0.6243749 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.132874016 0.02296588 0.6480654 0.6852531 0.5410526 0.9352995 0.9472494 1.0000000 0.14906491 0.16585366 0.6851650 0.9115727 0.9251873 0.7115024 0.58228125 0.46499502 0.37947698 0.28200300 0.14620044 0.3435039 0.5267176 0.2798408 -3.00 18.0 119.00 NA NA NA 190650 Caulobacter crescentus CB15 0.5632861 0.5080103 0.6542681 0.4614889 0.4543677 4.652953e-01 1.210033e-03 0.205562078 0.109219924 0.22747690 0.0706411328 7.262066e-65 3.029448e-59 1.000000e+00 4.645803e-61 2.377542e-24 3.322328e-31 4.474077e-06 1.192902e-07 1.762715e-33 4.095300e-01 1.000000e+00 3.594456e-01 4.381899e-01 8.801347e-01 9.682874e-03 2.617227e-03 1.105698e-10 7.262066e-65 1.00887640 0.86980679 4.095300e-01 -0.17081691 -0.12346824 NA NA NA 1.218488e-10 0.6354843 0.33721345 -0.3094401 1 0.6678389 0.7322679 -0.6288544 0.7177797 NA 0.38784366 0.303794741 -0.375602070 0.6678389 1 0.2413245 -0.22375169 0.7897374 NA 0.106320829 0.1152290268 -0.1363730666 0.7322679 0.2413245 1 -0.8016459 0.2572296 NA 0.142074481 0.049442337 -0.131551645 -0.6288544 -0.22375169 -0.8016459 1 -0.21819290 NA -0.146078230 -0.031550896 0.140297403 0.7177797 0.7897374 0.2572296 -0.21819290 1 NA 0.154311284 0.127392334 -0.1581089684 NA NA NA NA NA NA NA NA NA 0.38784366 0.106320829 0.142074481 -0.146078230 0.154311284 NA 1 0.539359595 -0.70993981 0.303794741 0.1152290268 0.049442337 -0.031550896 0.127392334 NA 0.539359595 1 -0.7726806 -0.375602070 -0.1363730666 -0.131551645 0.140297403 -0.1581089684 NA -0.70993981 -0.7726806 1 both 0.5284254 0.2638039 0.26625767 0.069659443 0.28943759 0.23201621 0.3554192 0.13622291 0.2796361 0.7908734 0.26881983 0.074327620 0.206763983 0.5456323 -0.091264599 2445 646 646 2105 1632 0.5963190 0.03019917 0.6564273097 5.0 50.0 45.0 0.05879520 3.418177e-02 0.0000000000 0.05742137 4.124919e-02 2.6189571 0.4490798 0.5885705 0.4927103 0.4229039 0.4538155 122 61 0.5242418 0.4320799 0.5878137 0.6085823 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.132106339 0.04253579 0.5396288 0.5852602 0.4824356 0.7513718 0.7838238 0.8969555 0.16255144 0.19250253 0.6709622 0.7755127 0.7922460 0.5495219 0.30801716 0.32991560 0.36606274 0.29221762 0.20465668 0.4081800 0.6082949 0.3355630 -3.00 10.0 67.00 NA NA NA 192952 Methanosarcina mazei Goe1 0.5470187 0.5044215 0.6831801 0.5318581 0.5279821 9.869372e-01 2.595817e-01 0.233387453 0.147082713 0.20225840 0.1077798474 5.071543e-64 2.328497e-60 2.328916e-09 2.424559e-47 1.856024e-15 2.435456e-26 2.352099e-05 9.809937e-06 5.186159e-34 2.033157e-02 4.851704e-02 5.952090e-01 4.573629e-01 1.423304e-03 3.728042e-04 1.123641e-04 2.696702e-13 5.071543e-64 0.55546051 0.75643326 1.095539e-01 0.27108343 0.24779954 4.851704e-02 0.196189090 0.042774763 6.398902e-13 0.6941490 0.41445970 -0.5528249 1 0.6753686 0.8885904 -0.8885904 0.6431526 0.36564328 0.12351337 0.040031225 -0.080680573 0.6753686 1 0.3742771 -0.37427712 0.6923804 0.72427818 0.078601559 -0.0199104789 -0.0316428491 0.8885904 0.3742771 1 -1.0000000 0.3297908 0.20917822 0.060732313 0.035391509 -0.057634744 -0.8885904 -0.37427712 -1.0000000 1 -0.32979076 -0.20917822 -0.060732313 -0.035391509 0.057634744 0.6431526 0.6923804 0.3297908 -0.32979076 1 0.3318015 0.069581920 -0.024611484 -0.0219720305 0.36564328 0.72427818 0.20917822 -0.20917822 0.3318015 1 0.057159680 -0.037470047 -0.0183226557 0.12351337 0.078601559 0.060732313 -0.060732313 0.069581920 0.057159680 1 0.356264795 -0.46153174 0.040031225 -0.0199104789 0.035391509 -0.035391509 -0.024611484 -0.037470047 0.356264795 1 -0.7867496 -0.080680573 -0.0316428491 -0.057634744 0.057634744 -0.0219720305 -0.0183226557 -0.46153174 -0.7867496 1 both 0.4637429 0.2766141 0.18714720 0.008426966 0.18945760 0.18410463 0.2930960 0.08052434 0.2257490 0.8703192 0.38604259 0.038008932 0.217078097 0.4720179 0.055964193 2303 534 534 1844 1527 0.5683891 0.03521127 0.4853608722 11.0 154.0 143.0 0.02277300 9.312865e-01 -0.0016052146 0.01765136 9.945978e-01 0.3221933 0.4324794 0.6497573 0.3766414 0.4381242 0.3801076 114 57 0.3975566 0.5447824 0.6739874 0.6750683 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.051671733 0.01042119 0.7231702 0.6955619 0.5874126 0.9664088 0.9512661 1.0000000 0.05958747 0.06539235 0.9577437 0.9484123 0.9368762 0.7633322 0.64061458 0.51867420 0.46339221 0.37695390 0.19896234 0.2375163 0.5150812 0.1736111 0.00 21.0 121.00 NA NA NA 193567 Streptococcus pyogenes SSI-1 0.8135411 0.6966161 0.8140785 0.6427540 0.4755980 2.710482e-02 6.852820e-02 0.334014248 0.130849293 0.32789288 0.1504802927 6.445025e-28 5.005975e-31 6.904575e-12 3.299767e-27 1.248398e-06 3.458169e-10 2.257949e-03 3.064007e-04 1.920797e-12 6.444940e-05 1.625483e-02 1.927687e-01 7.314808e-01 9.157103e-01 3.262361e-02 1.652091e-02 8.856818e-04 6.445025e-28 0.28062212 0.29183418 1.354886e-03 0.68813960 0.64989437 1.625483e-02 0.112392122 0.044728802 1.900702e-03 0.5894098 0.31516687 -0.9751987 1 0.8856959 0.6982670 -0.6987614 0.7724970 0.57530853 0.22970656 0.151385678 -0.192791294 0.8856959 1 0.3658542 -0.36634230 0.8516670 0.67710831 0.150635525 0.0910116322 -0.1251009088 0.6982670 0.3658542 1 -0.9888345 0.2717738 0.21718149 0.053639132 0.007666731 -0.063268707 -0.6987614 -0.36634230 -0.9888345 1 -0.27167797 -0.21588789 -0.053532097 -0.006218615 0.058062912 0.7724970 0.8516670 0.2717738 -0.27167797 1 0.6149909 0.145979851 0.090872078 -0.1354975163 0.57530853 0.67710831 0.21718149 -0.21588789 0.6149909 1 0.129896515 0.022012628 -0.0821160578 0.22970656 0.150635525 0.053639132 -0.053532097 0.145979851 0.129896515 1 0.635519964 -0.63265730 0.151385678 0.0910116322 0.007666731 -0.006218615 0.090872078 0.022012628 0.635519964 1 -0.7713364 -0.192791294 -0.1251009088 -0.063268707 0.058062912 -0.1354975163 -0.0821160578 -0.63265730 -0.7713364 1 both 0.2283828 0.2496493 0.43036304 0.187861272 0.42910448 0.44000000 0.4858086 0.24566474 0.4411607 0.7348193 0.23068548 0.128827082 0.228154416 0.5244020 -0.048804011 1515 173 173 1514 347 0.8844884 0.06392324 0.5518293511 2.0 46.0 44.0 0.04936034 8.450721e-01 0.0000000000 0.06552239 5.196500e-01 2.4416614 0.5240924 0.7856749 0.5582392 0.5214521 0.5519080 100 50 0.5578472 0.4576734 0.6447932 0.6537529 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.068646865 0.03234323 0.5626047 0.7023437 0.5555556 0.7443443 0.8467814 0.9215686 0.10298507 0.08571429 0.7659383 0.7682527 0.7583842 0.6790856 0.59917400 0.39777177 0.29263240 0.19128331 0.10082783 0.4343234 0.5582822 0.3406721 0.00 13.0 63.00 NA NA NA 194439 Chlorobium tepidum TLS 0.5777087 0.5120773 0.6758437 0.5073184 0.4966238 8.558622e-02 2.351790e-02 0.249290680 0.146748762 0.29465251 0.0943175200 7.722871e-42 8.095290e-44 1.000000e+00 1.845980e-41 2.887705e-22 1.347269e-29 1.009699e-06 4.256563e-10 1.045967e-32 2.349327e-03 1.000000e+00 3.943736e-02 4.948142e-05 9.756394e-05 2.523043e-03 4.623917e-05 8.939359e-12 7.722871e-42 0.21624399 0.29247489 2.349327e-03 0.59544456 0.54217424 NA NA NA 2.063769e-10 0.6692252 0.52506072 -0.3297062 1 0.8152956 0.5691140 -0.4371187 0.6787191 NA 0.42734582 0.372320736 -0.396035373 0.8152956 1 0.1980595 -0.16035958 0.7347158 NA 0.221278750 0.2177108058 -0.2512983291 0.5691140 0.1980595 1 -0.6360930 0.1869527 NA 0.069208350 0.023300509 -0.042334907 -0.4371187 -0.16035958 -0.6360930 1 -0.19908471 NA -0.058177619 -0.032992779 0.074401705 0.6787191 0.7347158 0.1869527 -0.19908471 1 NA 0.158615407 0.150607489 -0.1766690934 NA NA NA NA NA NA NA NA NA 0.42734582 0.221278750 0.069208350 -0.058177619 0.158615407 NA 1 0.793194689 -0.64429374 0.372320736 0.2177108058 0.023300509 -0.032992779 0.150607489 NA 0.793194689 1 -0.7264361 -0.396035373 -0.2512983291 -0.042334907 0.074401705 -0.1766690934 NA -0.64429374 -0.7264361 1 both 0.4796321 0.2815553 0.19448095 0.015068493 0.20641711 0.17546848 0.5013141 0.27534247 0.4280639 0.7235249 0.26852688 0.138600846 0.224112369 0.5033762 -0.006752411 1522 365 365 1301 951 0.6143233 0.03136587 0.8700187786 1.0 39.0 38.0 0.05207846 2.820601e-01 -0.0184779901 0.03841886 6.616256e-01 3.6801875 0.3968463 0.5967100 0.4197785 0.4303548 0.4217961 100 50 0.4647519 0.2500772 0.5029427 0.5393554 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.100525624 0.01314060 0.5420753 0.6303912 0.4219653 0.5919593 0.7274930 0.5202312 0.12085561 0.10221465 0.4396085 0.5775704 0.6620054 0.5963393 0.48584648 0.55062717 0.42177620 0.27638370 0.13791864 0.4165572 0.5844595 0.3760196 2.00 19.0 48.00 NA NA NA 196164 Corynebacterium efficiens YS-314 0.5993220 0.5197297 0.6447458 0.4210351 0.4037304 1.144296e-03 9.159437e-03 0.454376300 0.172418899 0.38999505 0.0746798108 4.772445e-50 1.453220e-56 3.412502e-33 7.434710e-40 8.229401e-27 2.942771e-25 2.854879e-14 8.652108e-16 2.669841e-42 2.688191e-09 3.674629e-08 3.246833e-01 5.969853e-03 1.792123e-04 1.278849e-08 1.311329e-10 1.036422e-19 4.772445e-50 0.21342900 0.24428626 7.033766e-03 0.44170984 0.39184850 3.674629e-08 0.287833753 0.139336323 5.227321e-19 0.7709843 0.57648638 -0.4274442 1 0.8743858 0.6120190 -0.5034341 0.6688942 0.64717202 0.27215222 0.196112054 -0.245876189 0.8743858 1 0.2584822 -0.20449160 0.6934395 0.74391524 0.118519523 0.0977374772 -0.1086733338 0.6120190 0.2584822 1 -0.7662257 0.2358438 0.18956097 0.113041335 0.048334830 -0.147551348 -0.5034341 -0.20449160 -0.7662257 1 -0.17940461 -0.13939814 -0.127811716 -0.063041771 0.156812791 0.6688942 0.6934395 0.2358438 -0.17940461 1 0.4702978 0.062451571 0.174007124 -0.1314632924 0.64717202 0.74391524 0.18956097 -0.13939814 0.4702978 1 0.101404795 0.012176503 -0.0584899532 0.27215222 0.118519523 0.113041335 -0.127811716 0.062451571 0.101404795 1 0.396180718 -0.50517961 0.196112054 0.0977374772 0.048334830 -0.063041771 0.174007124 0.012176503 0.396180718 1 -0.7560104 -0.245876189 -0.1086733338 -0.147551348 0.156812791 -0.1314632924 -0.0584899532 -0.50517961 -0.7560104 1 both 0.5509989 0.2997810 0.21293375 0.033396947 0.24135157 0.15933232 0.5778128 0.35591603 0.4989831 0.6327152 0.09033792 0.212221892 0.153369046 0.5921903 -0.184380692 1902 525 523 1768 1182 0.6535226 0.02911967 0.8585254059 -6.0 31.0 37.0 0.09892606 4.366979e-04 0.0402981165 0.08273219 5.503268e-03 3.4031108 0.3811777 0.5568165 0.4196856 0.3790747 0.4303041 100 50 0.6767282 0.3480258 0.6833894 0.6904860 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.107781283 0.03417455 0.5025975 0.5603025 0.4629630 0.6024474 0.6894991 0.6666667 0.15205149 0.12291351 0.5779757 0.6736017 0.7418204 0.6521285 0.47887952 0.40208106 0.33096765 0.23540644 0.12032568 0.4116719 0.6197531 0.3553774 0.00 10.0 51.50 NA NA NA 196620 Staphylococcus aureus subsp. aureus MW2 0.7613982 0.6366580 0.7522796 0.5426721 0.4230037 8.840614e-01 2.833874e-05 0.199056802 0.058660834 0.24316358 0.0644224103 1.220651e-60 4.929462e-60 2.366961e-43 8.426893e-60 1.428414e-20 1.773279e-26 1.343047e-04 2.747290e-04 7.708709e-22 2.605935e-03 6.315357e-04 5.445261e-03 1.209568e-02 3.128555e-01 1.082606e-02 8.886460e-03 9.326712e-03 1.220651e-60 0.65276774 0.71606795 4.099013e-01 0.18632342 0.19786193 6.315357e-04 0.287947871 0.231952128 8.530607e-03 0.3522944 0.19892955 -0.5092378 1 0.8963687 0.6721635 -0.6626401 0.8396328 0.74730391 0.19482319 0.182321561 -0.199757573 0.8963687 1 0.3401768 -0.33780170 0.8683869 0.84814800 0.098674596 0.0853948997 -0.1040816495 0.6721635 0.3401768 1 -0.9515331 0.3373876 0.26713152 0.114954279 0.109920841 -0.132734390 -0.6626401 -0.33780170 -0.9515331 1 -0.32750477 -0.26643524 -0.112413186 -0.106356553 0.129435661 0.8396328 0.8683869 0.3373876 -0.32750477 1 0.6643130 0.100536847 0.098244824 -0.1064553822 0.74730391 0.84814800 0.26713152 -0.26643524 0.6643130 1 0.071571476 0.052128166 -0.0780765254 0.19482319 0.098674596 0.114954279 -0.112413186 0.100536847 0.071571476 1 0.761627792 -0.83852862 0.182321561 0.0853948997 0.109920841 -0.106356553 0.098244824 0.052128166 0.761627792 1 -0.7793428 -0.199757573 -0.1040816495 -0.132734390 0.129435661 -0.1064553822 -0.0780765254 -0.83852862 -0.7793428 1 both 0.3292929 0.2925230 0.37929293 0.084355828 0.40369708 0.24422442 0.5767677 0.33128834 0.5159574 0.6685803 0.08833959 0.191152149 0.194463380 0.5720612 -0.144122479 1980 325 327 2004 628 0.8469697 0.04475224 0.6829171136 -16.0 52.0 68.0 0.16824008 9.810537e-07 0.0143321326 0.16217668 2.743320e-06 4.3836781 0.3974747 0.6726642 0.4338359 0.3959596 0.4304134 100 50 0.7291880 0.4432561 0.7555001 0.7555985 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.048989899 0.03686869 0.5806332 0.5925646 0.6235294 0.7172623 0.7132769 0.6529412 0.08407871 0.09570957 0.7535883 0.7774139 0.7763580 0.6289176 0.49713883 0.39401067 0.30268526 0.21387353 0.16910677 0.4287879 0.6245007 0.3091945 0.00 13.0 37.00 NA NA NA 196627 Corynebacterium glutamicum ATCC 13032 0.5923822 0.5170690 0.6739058 0.4969810 0.4819076 0.000000e+00 6.610536e-08 0.483948362 -0.247931504 0.48382070 -0.2751953605 3.085922e-42 2.072384e-47 5.046735e-21 2.279933e-50 5.602123e-14 1.375340e-13 2.580035e-88 6.664912e-78 6.690374e-37 6.084495e-08 3.832449e-04 9.875880e-10 7.541655e-01 4.916948e-01 1.896757e-77 1.144624e-68 2.373071e-17 3.085922e-42 0.17602126 0.19554642 4.154481e-05 0.55894980 0.43657593 3.832449e-04 0.098494858 0.037282638 1.355819e-15 0.7711090 0.55750918 -0.4661917 1 0.7139690 0.8466495 -0.8446019 0.6160405 0.48203956 0.12324004 0.099685093 -0.092237678 0.7139690 1 0.3122931 -0.30854676 0.6967622 0.62209097 0.086985334 0.0879403267 -0.0609497956 0.8466495 0.3122931 1 -0.9956300 0.2672325 0.24929617 0.029843012 0.003707235 -0.023262856 -0.8446019 -0.30854676 -0.9956300 1 -0.26291553 -0.24448682 -0.028794978 -0.001628189 0.020481808 0.6160405 0.6967622 0.2672325 -0.26291553 1 0.4444024 0.102652761 0.117373284 -0.0732575488 0.48203956 0.62209097 0.24929617 -0.24448682 0.4444024 1 0.040556519 0.061326995 -0.0382823351 0.12324004 0.086985334 0.029843012 -0.028794978 0.102652761 0.040556519 1 0.797104100 -0.74976373 0.099685093 0.0879403267 0.003707235 -0.001628189 0.117373284 0.061326995 0.797104100 1 -0.6824341 -0.092237678 -0.0609497956 -0.023262856 0.020481808 -0.0732575488 -0.0382823351 -0.74976373 -0.6824341 1 both 0.4838870 0.2693969 0.21913733 0.045081967 0.26246106 0.14324693 0.4868617 0.29918033 0.4256599 0.6816281 0.29241424 0.155003065 0.176855546 0.5180924 -0.036184871 2017 488 488 1773 1220 0.6365890 0.05358319 0.1371535641 -9.0 48.0 57.0 0.13044799 2.536046e-07 0.0302418483 0.12057839 2.560371e-06 4.2146514 0.4873575 0.6107761 0.5023825 0.4804165 0.4961222 100 50 0.4892449 0.5880021 0.6943928 0.6954431 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.075855231 0.03569658 0.6025604 0.6036694 0.4933333 0.9283459 0.9227500 1.0000000 0.11448598 0.10641201 0.9271414 0.9344743 0.9310599 0.6520025 0.47791716 0.27565109 0.23536215 0.16698496 0.09440110 0.4129896 0.6583710 0.3441270 0.00 11.0 54.00 NA NA NA 197221 Thermosynechococcus elongatus BP-1 0.5329293 0.5021687 0.6428283 0.4415091 0.4395337 9.827016e-01 9.978169e-01 0.244671836 0.215472661 0.17651259 0.1309031960 4.505770e-32 1.817016e-36 1.000000e+00 5.464913e-32 1.745056e-06 1.825644e-10 1.628533e-01 7.638534e-02 6.094909e-10 3.423313e-06 1.000000e+00 8.307921e-02 2.374447e-01 1.177610e-01 4.905518e-01 2.641915e-01 3.409815e-02 4.505770e-32 -0.23226932 -0.22268463 3.423313e-06 1.43189722 0.94860630 NA NA NA 2.577902e-01 0.2338363 0.06966156 -0.2199492 1 0.6347629 0.8010225 -0.7808343 0.6433295 NA 0.21983866 0.076008046 -0.103233308 0.6347629 1 0.1936707 -0.18616946 0.6731005 NA 0.072075180 0.0575297947 -0.0531972056 0.8010225 0.1936707 1 -0.9417049 0.2471267 NA 0.097333768 -0.018343437 -0.044612501 -0.7808343 -0.18616946 -0.9417049 1 -0.23910436 NA -0.100980846 0.020314105 0.038732169 0.6433295 0.6731005 0.2471267 -0.23910436 1 NA 0.077799212 0.057224103 -0.0592483091 NA NA NA NA NA NA NA NA NA 0.21983866 0.072075180 0.097333768 -0.100980846 0.077799212 NA 1 0.141682635 -0.03786233 0.076008046 0.0575297947 -0.018343437 0.020314105 0.057224103 NA 0.141682635 1 -0.8038338 -0.103233308 -0.0531972056 -0.044612501 0.038732169 -0.0592483091 NA -0.03786233 -0.8038338 1 both 0.5556254 0.2247550 0.17724701 0.027149321 0.19063927 0.16083916 0.3588938 0.20814480 0.3050505 0.6749508 0.30774633 0.116658139 0.125577499 0.5604663 -0.120932554 1591 442 442 1319 1156 0.5505971 0.03743175 0.6394762045 2.0 39.0 37.0 0.04225979 4.829712e-01 0.0000000000 0.04559345 3.863692e-01 4.0644376 0.4412319 0.6072760 0.5005506 0.4236329 0.4878340 100 50 0.4203658 0.3946057 0.5128994 0.5241063 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.063482087 0.02325581 0.5249825 0.5102175 0.3333333 0.7110662 0.7107895 0.8695652 0.08904110 0.08391608 0.7142633 0.7381648 0.7459465 0.6578917 0.50392178 0.22017107 0.13071934 0.12125497 0.12968055 0.4104337 0.6489362 0.3590527 0.00 12.0 35.00 NA NA NA 198094 Bacillus anthracis str. Ames 0.7469403 0.6219590 0.7058934 0.4172847 0.3145299 4.793779e-01 8.676259e-01 0.173430474 0.017286700 0.20994255 0.0193251495 1.675875e-84 1.194164e-86 1.175404e-63 8.267323e-95 2.723531e-49 5.945928e-49 1.439059e-11 1.127606e-09 3.863186e-49 1.051998e-08 1.505306e-08 3.934837e-13 9.750603e-02 1.945560e-02 5.125202e-05 1.456018e-04 1.125000e-12 1.675875e-84 0.41509660 0.42262347 5.811433e-02 0.24794052 0.21841746 1.505306e-08 0.243408937 0.159777865 8.921714e-11 0.5493884 0.34112283 -0.4073873 1 0.9189436 0.5414325 -0.5184375 0.7258229 0.42908602 0.31061652 0.292865343 -0.285846873 0.9189436 1 0.2685285 -0.25673049 0.7494812 0.38536081 0.150784680 0.1393509078 -0.1381021679 0.5414325 0.2685285 1 -0.9361413 0.3201509 0.25124070 0.112094900 0.098790155 -0.128055059 -0.5184375 -0.25673049 -0.9361413 1 -0.31155186 -0.24522472 -0.105960365 -0.094334523 0.121018690 0.7258229 0.7494812 0.3201509 -0.31155186 1 0.5483302 0.158805912 0.151917288 -0.1419777478 0.42908602 0.38536081 0.25124070 -0.24522472 0.5483302 1 0.125366072 0.121425763 -0.1181749868 0.31061652 0.150784680 0.112094900 -0.105960365 0.158805912 0.125366072 1 0.928748272 -0.84203824 0.292865343 0.1393509078 0.098790155 -0.094334523 0.151917288 0.121425763 0.928748272 1 -0.7964841 -0.285846873 -0.1381021679 -0.128055059 0.121018690 -0.1419777478 -0.1181749868 -0.84203824 -0.7964841 1 both 0.4166444 0.2594466 0.23926380 0.043533931 0.26185243 0.11170213 0.4977327 0.32906530 0.4481265 0.5468162 0.08434076 0.225564421 0.046603887 0.6776050 -0.355209931 3749 781 781 3967 1344 0.8495599 0.07637808 0.0074672905 -26.5 75.0 101.5 0.16902479 2.575495e-12 0.0018162598 0.15201577 4.824755e-10 2.8631838 0.2982129 0.6365244 0.4219601 0.2979461 0.4117041 186 93 0.7750459 0.4359529 0.7996867 0.8039082 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.055481462 0.01573753 0.5147043 0.5499221 0.5468165 0.6168265 0.6393592 0.6254682 0.07221350 0.06560284 0.6822445 0.7548154 0.7748063 0.5316922 0.42732529 0.41639234 0.31786470 0.36170736 0.34568151 0.3366231 0.5997770 0.2538569 0.00 16.0 48.75 NA NA NA 198214 Shigella flexneri 2a str. 301 0.5516746 0.5053405 0.6909091 0.5475893 0.5429716 1.853801e-01 7.812661e-05 0.389003767 0.123731514 0.37215048 0.1207502715 3.704780e-75 2.921024e-78 1.471437e-40 7.695754e-69 4.232743e-14 7.251924e-34 4.975436e-14 8.403479e-17 5.716517e-57 9.310726e-08 8.934073e-04 2.505889e-01 3.204884e-06 7.613199e-01 1.122492e-06 3.416106e-09 1.813365e-32 3.704780e-75 0.23614094 0.20777700 2.289511e-06 0.91839304 0.73060413 8.934073e-04 -0.303539112 -0.137698948 5.985362e-32 0.8191705 0.54347197 -0.5214463 1 0.8276112 0.7816967 -0.7663374 0.6492333 0.49445501 0.39173396 0.319636620 -0.372360088 0.8276112 1 0.4013685 -0.40226199 0.7396787 0.64309212 0.253189588 0.2155576165 -0.2331433915 0.7816967 0.4013685 1 -0.8525308 0.2838885 0.24203850 0.178568561 0.107347492 -0.179609429 -0.7663374 -0.40226199 -0.8525308 1 -0.32636525 -0.28336422 -0.138465436 -0.084962357 0.171807482 0.6492333 0.7396787 0.2838885 -0.32636525 1 0.6140860 0.155738688 0.165365416 -0.1599733201 0.49445501 0.64309212 0.24203850 -0.28336422 0.6140860 1 0.070867718 0.076460490 -0.0886014389 0.39173396 0.253189588 0.178568561 -0.138465436 0.155738688 0.070867718 1 0.817990314 -0.85180062 0.319636620 0.2155576165 0.107347492 -0.084962357 0.165365416 0.076460490 0.817990314 1 -0.7539061 -0.372360088 -0.2331433915 -0.179609429 0.171807482 -0.1599733201 -0.0886014389 -0.85180062 -0.7539061 1 both 0.4473684 0.3162940 0.31682825 0.096749226 0.34418324 0.27990236 0.4525623 0.15479876 0.3605263 0.8436736 0.29438373 0.070747423 0.311067482 0.4570284 0.085943300 2888 646 646 2306 1874 0.5744460 0.05089040 0.0516283819 -8.0 37.0 45.0 0.05872596 1.535321e-02 0.0248316851 0.06601612 4.251519e-03 2.7385331 0.5727147 0.6742434 0.5916478 0.5644044 0.5763399 144 72 0.5397264 0.6434968 0.7378066 0.7472008 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.078601108 0.04051247 0.6756998 0.7080730 0.6744186 0.8725275 0.8846379 0.9767442 0.12176010 0.11554109 0.8392302 0.8387050 0.8385207 0.8794547 0.58742941 0.24923627 0.22165666 0.16138332 0.09499526 0.3936981 0.5846995 0.3051191 -3.00 10.0 31.00 NA NA NA 198215 Shigella flexneri 2a str. 2457T 0.5624385 0.5077971 0.6922321 0.5480421 0.5413116 4.094002e-01 9.850145e-04 0.389838499 0.129232415 0.37409378 0.0899379732 3.422256e-75 6.691510e-78 1.879528e-37 5.389637e-71 1.212703e-14 1.744801e-34 5.794543e-17 5.504712e-18 5.680891e-62 8.404201e-07 6.658596e-03 2.284660e-02 3.283692e-06 8.149147e-01 8.445378e-09 2.122459e-10 1.561901e-36 3.422256e-75 0.15492843 0.13759436 1.047100e-06 1.05041795 0.85185743 6.658596e-03 -0.436117058 -0.184230507 4.683947e-36 0.8358294 0.60079719 -0.4726087 1 0.8300273 0.8120962 -0.8118925 0.6321664 0.46913715 0.41017319 0.319756567 -0.345620572 0.8300273 1 0.4222085 -0.42192682 0.7323310 0.60988964 0.269569678 0.2327540674 -0.2270515707 0.8120962 0.4222085 1 -0.9995651 0.2901049 0.24831191 0.183357537 0.091545920 -0.150982405 -0.8118925 -0.42192682 -0.9995651 1 -0.28975224 -0.24801109 -0.183065520 -0.090943009 0.150471594 0.6321664 0.7323310 0.2901049 -0.28975224 1 0.6167230 0.170592351 0.156754239 -0.1887332037 0.46913715 0.60988964 0.24831191 -0.24801109 0.6167230 1 0.080099097 0.066694744 -0.1160821185 0.41017319 0.269569678 0.183357537 -0.183065520 0.170592351 0.080099097 1 0.789883049 -0.79728911 0.319756567 0.2327540674 0.091545920 -0.090943009 0.156754239 0.066694744 0.789883049 1 -0.7421632 -0.345620572 -0.2270515707 -0.150982405 0.150471594 -0.1887332037 -0.1160821185 -0.79728911 -0.7421632 1 both 0.4446023 0.3258661 0.33025568 0.106230032 0.35340157 0.29696970 0.4588068 0.14856230 0.3633235 0.8514760 0.27836372 0.068143811 0.322519196 0.4586884 0.082623104 2816 626 626 2288 1780 0.5898438 0.04639202 0.1065131385 5.0 55.0 50.0 0.05517617 3.158781e-02 0.0404671010 0.06371950 7.914964e-03 2.8011520 0.5344460 0.6816031 0.4778273 0.5323153 0.4731467 140 70 0.5637132 0.5872519 0.7414635 0.7514769 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.082031250 0.04651989 0.6823031 0.7104467 0.6906077 0.9224976 0.9061347 0.9889503 0.12281758 0.13679654 0.9357632 0.9013114 0.8869040 0.6426801 0.42611628 0.34454766 0.29988951 0.21002538 0.11361445 0.3725142 0.6268817 0.2470838 0.00 11.0 44.25 NA NA NA 198466 Streptococcus pyogenes MGAS315 0.8160858 0.6998205 0.8187668 0.6525665 0.4839602 2.703218e-05 1.338578e-02 0.356163461 0.139622199 0.33590942 0.1181877598 7.681547e-27 1.283624e-28 1.143767e-09 6.578719e-27 3.447369e-06 6.155467e-10 2.660316e-04 5.161521e-04 8.254411e-13 1.552080e-03 1.311916e-01 3.225328e-02 8.925636e-01 6.414429e-01 4.382476e-03 1.410718e-02 5.604452e-04 7.681547e-27 0.29423145 0.30542058 5.340862e-03 0.69551336 0.64831272 1.311916e-01 0.033173106 0.013088537 9.201388e-04 0.6146445 0.34677193 -0.9420607 1 0.8605212 0.6886218 -0.6866895 0.7506037 0.52151408 0.24212274 0.165579941 -0.187114425 0.8605212 1 0.3269314 -0.33616934 0.8451393 0.65358068 0.141024174 0.0880023903 -0.1092039397 0.6886218 0.3269314 1 -0.8750747 0.2269336 0.14351253 0.081986194 0.045330126 -0.071515458 -0.6866895 -0.33616934 -0.8750747 1 -0.23969082 -0.16904004 -0.092337594 -0.033823384 0.075048463 0.7506037 0.8451393 0.2269336 -0.23969082 1 0.6078000 0.131284867 0.084883186 -0.1164685154 0.52151408 0.65358068 0.14351253 -0.16904004 0.6078000 1 0.111356594 0.014683386 -0.0587097734 0.24212274 0.141024174 0.081986194 -0.092337594 0.131284867 0.111356594 1 0.683091855 -0.57932183 0.165579941 0.0880023903 0.045330126 -0.033823384 0.084883186 0.014683386 0.683091855 1 -0.7740332 -0.187114425 -0.1092039397 -0.071515458 0.075048463 -0.1164685154 -0.0587097734 -0.57932183 -0.7740332 1 both 0.2213491 0.2365188 0.43614931 0.198224852 0.43417160 0.45142857 0.4852652 0.26331361 0.4450402 0.7199876 0.26144586 0.135880303 0.213504621 0.5160398 -0.032079602 1527 169 169 1522 343 0.8853962 0.07864328 0.2933030695 -1.0 46.0 47.0 0.03945055 9.693725e-01 0.0000000000 0.05885038 6.565862e-01 2.6606145 0.5559921 0.7826854 0.5676519 0.5455141 0.5631659 100 50 0.5518664 0.5015390 0.6407000 0.6482902 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.071381794 0.03732809 0.5181381 0.6578518 0.4939759 0.6797807 0.7815658 0.8614458 0.11020710 0.09714286 0.7522163 0.7253911 0.7199993 0.7547397 0.67898145 0.40458749 0.24267011 0.17388522 0.08180176 0.4354944 0.5450450 0.3507549 0.00 14.5 67.00 NA NA NA 198804 Buchnera aphidicola str. Sg (Schizaphis graminum) 0.6403670 0.5394058 0.7211009 0.5811111 0.5470522 4.399063e-03 2.401824e-02 -0.050591086 0.081803504 -0.04755175 -0.0084751647 1.549124e-18 3.366005e-21 6.693934e-17 3.015574e-22 5.855489e-03 2.331255e-04 7.012203e-01 3.820506e-01 1.362740e-13 3.544389e-04 7.779165e-03 3.846321e-05 9.140685e-01 4.412099e-01 8.624070e-01 1.311103e-01 4.986691e-05 1.549124e-18 -0.08292938 -0.07020902 4.984525e-03 1.77235130 1.46493835 7.779165e-03 -0.596961434 -0.437628987 3.882656e-04 0.6078584 0.49456505 -0.5162648 1 0.9482039 0.6078946 -0.6165010 0.8389756 0.76574583 0.04674238 0.061785961 -0.029520640 0.9482039 1 0.3568648 -0.37227066 0.8945553 0.79207082 0.002498093 0.1105147806 -0.0836811693 0.6078946 0.3568648 1 -0.9466320 0.3295822 0.30000155 0.011870659 -0.017432313 0.037872848 -0.6165010 -0.37227066 -0.9466320 1 -0.34989110 -0.34170953 0.012911813 0.018199042 -0.033678434 0.8389756 0.8945553 0.3295822 -0.34989110 1 0.7886912 -0.018472278 0.133856013 -0.1239873046 0.76574583 0.79207082 0.30000155 -0.34170953 0.7886912 1 0.017743883 0.081755491 -0.0842428964 0.04674238 0.002498093 0.011870659 0.012911813 -0.018472278 0.017743883 1 -0.568752534 0.58971175 0.061785961 0.1105147806 -0.017432313 0.018199042 0.133856013 0.081755491 -0.568752534 1 -0.8375585 -0.029520640 -0.0836811693 0.037872848 -0.033678434 -0.1239873046 -0.0842428964 0.58971175 -0.8375585 1 both 0.3867684 0.4007841 0.55979644 0.223684211 0.55147059 0.57851240 0.4529262 0.06578947 0.3449541 0.9342074 0.22652374 0.029799196 0.393327816 0.4529478 0.094104432 393 76 76 349 196 0.6921120 0.09969008 0.3759914695 -15.0 51.0 66.0 0.07067331 7.970284e-01 -0.0099993063 0.08234079 6.212411e-01 1.7078103 0.5776081 0.8328137 0.5847965 0.5801527 0.6027041 100 50 0.7121651 0.4208685 0.7615936 0.7619531 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.040712468 0.01526718 0.7630826 0.4543905 0.7727273 0.8487171 0.6135170 0.8181818 0.06617647 0.03305785 0.7903161 0.7938513 0.7942288 0.7244140 0.56245221 0.26877983 0.25931763 0.26040557 0.26287989 0.3486005 0.4727273 0.1907514 8.50 23.0 57.50 NA NA NA 199310 Escherichia coli CFT073 0.5508459 0.5051706 0.6460309 0.4452212 0.4406357 5.441854e-02 3.790809e-01 0.314078230 0.067671973 0.32783997 0.0387578207 2.977364e-118 1.788054e-125 1.440152e-84 4.505064e-118 1.243650e-47 8.835409e-72 7.956322e-24 1.941780e-31 2.975626e-79 1.895445e-14 6.246434e-16 1.068182e-05 3.441583e-01 2.518330e-02 2.352267e-10 2.107154e-15 1.007531e-27 2.977364e-118 0.50887824 0.50048953 1.588226e-01 0.22593888 0.20220356 6.246434e-16 0.366121686 0.196047189 4.641295e-25 0.6540284 0.49685791 -0.4217045 1 0.9071849 0.6366456 -0.4483144 0.7432728 0.70632945 0.34949126 0.290646937 -0.366315888 0.9071849 1 0.3316577 -0.22137349 0.7739443 0.76436223 0.217824515 0.1711521182 -0.2299265342 0.6366456 0.3316577 1 -0.6453103 0.3156301 0.27769087 0.106045791 0.060254528 -0.145058525 -0.4483144 -0.22137349 -0.6453103 1 -0.25666852 -0.18744997 -0.084084390 -0.039971234 0.131513110 0.7432728 0.7739443 0.3156301 -0.25666852 1 0.5841174 0.213311183 0.208731244 -0.2040001662 0.70632945 0.76436223 0.27769087 -0.18744997 0.5841174 1 0.142739980 0.113585794 -0.1378578921 0.34949126 0.217824515 0.106045791 -0.084084390 0.213311183 0.142739980 1 0.843400821 -0.88464102 0.290646937 0.1711521182 0.060254528 -0.039971234 0.208731244 0.113585794 0.843400821 1 -0.7506089 -0.366315888 -0.2299265342 -0.145058525 0.131513110 -0.2040001662 -0.1378578921 -0.88464102 -0.7506089 1 both 0.5479137 0.3301675 0.29208633 0.058823529 0.30000000 0.28122867 0.5482014 0.27731092 0.4523146 0.7170423 0.10525070 0.155117822 0.237965794 0.5593643 -0.118728536 3475 956 948 2963 2416 0.5784173 0.01344642 0.9979611107 -1.0 26.0 27.0 0.05312346 1.674515e-02 -0.0007183440 0.05530369 1.121750e-02 1.1288139 0.4201439 0.5850123 0.4553977 0.4189928 0.4431023 172 86 0.6596258 0.3839811 0.7147115 0.7278952 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.094100719 0.03769784 0.5974748 0.6970090 0.6441048 0.7408660 0.8458656 0.7969432 0.13532338 0.12696246 0.6570011 0.7884898 0.8209911 0.5362816 0.44448711 0.46582430 0.34224764 0.23258557 0.12008366 0.4189928 0.6315271 0.3313008 -3.00 7.0 32.25 NA NA NA 203267 Tropheryma whipplei str. Twist 0.7413366 0.6164867 0.7524752 0.5727646 0.4712264 1.788513e-01 7.267727e-13 0.093184474 0.009517038 0.13955288 -0.0374047391 7.220528e-17 9.322231e-17 2.981527e-06 7.434355e-17 4.890751e-06 8.486513e-07 9.065243e-02 2.117329e-02 7.816518e-15 9.931293e-02 5.087459e-01 1.919271e-01 4.025960e-01 6.228518e-01 2.010488e-01 8.721821e-02 1.474242e-05 7.220528e-17 0.41398378 0.43881100 1.287094e-01 0.40068948 0.31680315 5.087459e-01 -0.061620663 -0.011387755 3.718506e-05 0.6969461 0.61475023 -0.4809168 1 0.8769148 0.5756997 -0.4002806 0.7981643 0.52920771 0.24685064 0.115622251 -0.147054961 0.8769148 1 0.2603263 -0.20344637 0.8073052 0.62003492 0.139808161 0.0523191608 -0.0778928782 0.5756997 0.2603263 1 -0.4223065 0.2062908 0.16541862 0.061498277 0.069101935 -0.028938021 -0.4002806 -0.20344637 -0.4223065 1 -0.14934941 -0.12436912 -0.044494330 0.034001577 -0.000910609 0.7981643 0.8073052 0.2062908 -0.14934941 1 0.5251439 0.112588249 0.058623173 -0.0857505139 0.52920771 0.62003492 0.16541862 -0.12436912 0.5251439 1 0.099188257 0.009996350 -0.0355122228 0.24685064 0.139808161 0.061498277 -0.044494330 0.112588249 0.099188257 1 0.263942423 -0.40963433 0.115622251 0.0523191608 0.069101935 0.034001577 0.058623173 0.009996350 0.263942423 1 -0.8120493 -0.147054961 -0.0778928782 -0.028938021 -0.000910609 -0.0857505139 -0.0355122228 -0.40963433 -0.8120493 1 both 0.3289474 0.2973273 0.35197368 0.095000000 0.36345382 0.30000000 0.4786184 0.20000000 0.4096535 0.7790417 0.18865778 0.105754723 0.267108976 0.5287736 -0.057547226 608 100 100 599 209 0.8190789 0.08112450 0.5935675700 0.5 21.0 20.5 0.09846659 3.467089e-01 0.0000000000 0.11062432 2.201599e-01 5.9680458 0.4078947 0.6703577 0.3235041 0.4095395 0.3318959 100 50 0.6696872 0.2267167 0.6791279 0.6823378 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.105263158 0.02796053 0.4780417 0.8332841 0.5185185 0.4994682 0.8619986 0.5185185 0.14658635 0.07272727 0.5262020 0.5442545 0.5772865 0.6755152 0.59565371 0.35927507 0.27751422 0.24485762 0.22697293 0.4539474 0.5607477 0.3959391 -3.00 7.0 37.00 NA NA NA 204722 Brucella suis 1330 0.5916054 0.5167831 0.6703431 0.4890404 0.4740661 7.631768e-01 1.740295e-01 0.196151412 0.033238022 0.26969114 0.0673375118 3.117598e-71 9.688769e-74 5.675887e-46 1.676660e-71 1.818596e-21 8.713951e-28 7.844849e-08 1.709497e-10 1.222100e-45 1.383997e-08 4.708421e-10 3.860678e-04 6.902730e-01 3.386294e-01 7.069698e-03 4.954243e-04 1.687106e-12 3.117598e-71 0.63644168 0.64746108 6.477481e-01 0.09739157 0.08981349 4.708421e-10 0.399217689 0.230883950 9.240917e-11 0.5671575 0.40836930 -0.4764709 1 0.8691263 0.6406297 -0.5748814 0.7410397 0.70435868 0.35192971 0.284254078 -0.342654758 0.8691263 1 0.2760933 -0.23586327 0.7930519 0.82174798 0.190355837 0.1729760518 -0.2011869710 0.6406297 0.2760933 1 -0.9069919 0.2394552 0.23971247 0.132327875 0.036382163 -0.121672804 -0.5748814 -0.23586327 -0.9069919 1 -0.19906997 -0.19820558 -0.106914520 -0.019377705 0.097547514 0.7410397 0.7930519 0.2394552 -0.19906997 1 0.5611315 0.180462742 0.193124659 -0.1877748554 0.70435868 0.82174798 0.23971247 -0.19820558 0.5611315 1 0.124439343 0.105104402 -0.1290931278 0.35192971 0.190355837 0.132327875 -0.106914520 0.180462742 0.124439343 1 0.668799715 -0.82781110 0.284254078 0.1729760518 0.036382163 -0.019377705 0.193124659 0.105104402 0.668799715 1 -0.7435108 -0.342654758 -0.2011869710 -0.121672804 0.097547514 -0.1877748554 -0.1290931278 -0.82781110 -0.7435108 1 both 0.4917733 0.3094205 0.30438757 0.070631970 0.33429188 0.25219573 0.5242230 0.27602230 0.4424020 0.7230769 0.19969983 0.145169477 0.233884081 0.5259339 -0.051867726 2188 540 536 1931 1333 0.6357404 0.04929701 0.1703058523 -6.0 53.0 59.0 0.09879427 1.012762e-04 0.0348501366 0.08863486 6.974850e-04 4.2858542 0.4378428 0.5991594 0.4208045 0.4424132 0.4347117 108 54 0.6036467 0.3850067 0.6683199 0.6836890 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.106946984 0.03199269 0.6019454 0.7113504 0.6217105 0.7903642 0.8844325 0.8453947 0.13874910 0.13927227 0.6097372 0.8064266 0.8593074 0.5431865 0.45836854 0.44409023 0.36309521 0.28970233 0.16292105 0.3930530 0.5495495 0.3245729 0.00 16.0 82.75 NA NA NA 206672 Bifidobacterium longum NCC2705 0.6477733 0.5436739 0.6911510 0.5060973 0.4676019 2.949581e-01 2.305105e-09 0.391575597 0.054307870 0.35231874 0.0049969725 5.073018e-30 1.230661e-32 1.000000e+00 6.304958e-29 1.503035e-08 1.531886e-15 1.583269e-09 2.496273e-11 5.672945e-22 4.155558e-05 1.000000e+00 8.963718e-04 5.054589e-01 3.127097e-01 2.652083e-05 5.364855e-07 1.506013e-08 5.073018e-30 -0.75630176 -0.97599473 4.155558e-05 1.91618272 1.81468082 NA NA NA 9.651399e-08 0.6631445 0.43370965 -0.5931255 1 0.8301463 0.4725454 -0.4408434 0.7206202 NA 0.50703721 0.478692037 -0.464360187 0.8301463 1 0.1842432 -0.17879598 0.7571770 NA 0.191069820 0.1907759312 -0.1413003185 0.4725454 0.1842432 1 -0.8545868 0.2463163 NA 0.168829623 0.123677790 -0.206049895 -0.4408434 -0.17879598 -0.8545868 1 -0.23447804 NA -0.171275260 -0.119649138 0.211354790 0.7206202 0.7571770 0.2463163 -0.23447804 1 NA 0.210972588 0.221391451 -0.1714394529 NA NA NA NA NA NA NA NA NA 0.50703721 0.191069820 0.168829623 -0.171275260 0.210972588 NA 1 0.869433278 -0.83570811 0.478692037 0.1907759312 0.123677790 -0.119649138 0.221391451 NA 0.869433278 1 -0.7361324 -0.464360187 -0.1413003185 -0.206049895 0.211354790 -0.1714394529 NA -0.83570811 -0.7361324 1 both 0.4468619 0.2742610 0.23598326 0.041198502 0.27582160 0.13702624 0.4677824 0.24531835 0.3990746 0.7207954 0.24506236 0.130607025 0.206568376 0.5323981 -0.064796205 1195 267 267 1120 609 0.7129707 0.04553854 0.6909516120 2.5 89.5 87.0 0.18520648 1.035082e-07 0.0190587209 0.14390766 7.981615e-05 6.1435308 0.3213389 0.6257319 0.3670599 0.3648536 0.3696611 100 50 0.5436492 0.1822075 0.5507923 0.5659602 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.068619247 0.02845188 0.5424100 0.6145705 0.4741379 0.6276567 0.7113765 0.5603448 0.09272300 0.10787172 0.4938084 0.5939341 0.6616947 0.6414577 0.53593765 0.46678400 0.45982886 0.41292171 0.40254852 0.2820084 0.4539007 0.2289157 6.00 36.0 102.00 NA NA NA 208435 Streptococcus agalactiae 2603V/R 0.8064972 0.6878810 0.8116761 0.6467512 0.4886528 4.471261e-02 5.346550e-01 0.428321520 0.193043805 0.34194309 0.1911306328 7.976809e-38 6.380244e-39 2.194644e-14 1.101336e-36 1.276143e-06 1.687007e-11 5.273087e-04 1.637652e-02 3.246942e-14 2.869596e-03 1.413227e-01 5.613620e-01 5.843210e-03 4.967800e-02 4.640489e-03 1.133210e-01 8.739255e-03 7.976809e-38 0.39593998 0.46824567 8.837741e-03 0.66906034 0.75936908 1.413227e-01 -0.063242028 -0.026802829 8.796639e-03 0.4646525 0.26780189 -0.6252348 1 0.8586465 0.7425845 -0.7372047 0.8081312 0.53262152 0.19954551 0.134338946 -0.171704328 0.8586465 1 0.3812842 -0.38194650 0.8850565 0.64306778 0.122147901 0.0822261671 -0.1097557341 0.7425845 0.3812842 1 -0.8907413 0.3398084 0.21456844 0.084560831 0.038190378 -0.077387706 -0.7372047 -0.38194650 -0.8907413 1 -0.33538243 -0.21559699 -0.093273334 -0.039875876 0.088424993 0.8081312 0.8850565 0.3398084 -0.33538243 1 0.6240127 0.103554864 0.055711503 -0.0811863201 0.53262152 0.64306778 0.21456844 -0.21559699 0.6240127 1 0.031989179 -0.017153463 -0.0159636125 0.19954551 0.122147901 0.084560831 -0.093273334 0.103554864 0.031989179 1 0.617381671 -0.68924557 0.134338946 0.0822261671 0.038190378 -0.039875876 0.055711503 -0.017153463 0.617381671 1 -0.7993268 -0.171704328 -0.1097557341 -0.077387706 0.088424993 -0.0811863201 -0.0159636125 -0.68924557 -0.7993268 1 both 0.2320186 0.2544860 0.43097448 0.140000000 0.42923280 0.44339623 0.5104408 0.24000000 0.4595104 0.7595738 0.20617583 0.122723336 0.264994163 0.5113472 -0.022694468 1724 200 200 1713 411 0.8770302 0.05962364 0.5231343411 6.0 42.0 36.0 0.06196965 4.729544e-01 -0.0049999817 0.06157033 4.813304e-01 2.9466526 0.4756381 0.7615250 0.4917909 0.5011601 0.5131123 100 50 0.5918341 0.5118506 0.6790115 0.6845254 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.060324826 0.04234339 0.5821969 0.6108423 0.5536723 0.7647141 0.7886885 0.8870056 0.10185185 0.10849057 0.7717334 0.7830684 0.7849331 0.7129797 0.54152727 0.34082986 0.18417228 0.09736121 0.05369523 0.4530162 0.6271871 0.3211009 0.00 12.0 39.50 NA NA NA 208964 Pseudomonas aeruginosa PAO1 0.5681696 0.5092942 0.7057661 0.5751400 0.5673075 3.116520e-10 0.000000e+00 0.503485212 0.208370649 0.41193952 0.1194660470 1.667057e-72 1.839824e-93 6.868662e-43 3.782493e-88 2.034541e-19 9.250564e-43 3.708436e-24 2.920052e-18 9.722210e-63 4.296569e-28 7.943239e-16 2.612642e-20 4.378649e-02 4.855377e-08 5.462714e-19 2.840211e-15 1.806351e-33 1.667057e-72 0.33483244 0.33778242 4.231752e-15 0.56996839 0.44002086 7.943239e-16 0.225600717 0.095142647 1.613395e-27 0.7527596 0.51660222 -0.7181608 1 0.7678240 0.8219119 -0.8183687 0.6521241 0.50841368 0.18162130 0.159899496 -0.178033756 0.7678240 1 0.3377298 -0.33435885 0.7411956 0.67481664 0.104450816 0.0982960194 -0.0708227658 0.8219119 0.3377298 1 -0.9893787 0.2867790 0.22927439 0.067412217 0.042460321 -0.104428914 -0.8183687 -0.33435885 -0.9893787 1 -0.28521611 -0.22501298 -0.069412027 -0.046096022 0.107036405 0.6521241 0.7411956 0.2867790 -0.28521611 1 0.4839630 0.093766173 0.090324572 -0.0653559775 0.50841368 0.67481664 0.22927439 -0.22501298 0.4839630 1 0.047831230 0.035499542 -0.0223032817 0.18162130 0.104450816 0.067412217 -0.069412027 0.093766173 0.047831230 1 0.903418324 -0.77267233 0.159899496 0.0982960194 0.042460321 -0.046096022 0.090324572 0.035499542 0.903418324 1 -0.7605173 -0.178033756 -0.0708227658 -0.104428914 0.107036405 -0.0653559775 -0.0223032817 -0.77267233 -0.7605173 1 both 0.4169000 0.2849531 0.32094681 0.100122100 0.35083227 0.27679697 0.4115551 0.15750916 0.3368062 0.8344012 0.38050364 0.068153032 0.275249039 0.4326925 0.134614987 3929 819 819 3163 2404 0.5963349 0.05903475 0.0027416883 -15.5 44.0 59.5 0.07502453 4.754091e-05 0.0557294610 0.07935392 1.342783e-05 2.7322441 0.5685925 0.7144597 0.5039965 0.5660473 0.4980765 196 98 0.4511137 0.5613275 0.6776784 0.6829438 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.123186561 0.03435989 0.6669374 0.7049657 0.6752827 0.9311653 0.9306697 0.9983845 0.15620999 0.15952081 0.8824336 0.9058184 0.8909842 0.6987212 0.52675716 0.28919652 0.24232122 0.14453393 0.05557196 0.4247900 0.6153846 0.3347076 0.00 12.0 53.00 NA NA NA 209261 Salmonella enterica subsp. enterica serovar Typhi Ty2 0.5968078 0.5187435 0.7196391 0.5955756 0.5800683 9.814967e-01 4.980799e-02 0.470061157 0.211591436 0.43389582 0.1828355271 1.801661e-67 1.211710e-77 1.091110e-34 3.704561e-69 7.995343e-13 3.512260e-29 2.651565e-18 4.323541e-14 3.481384e-38 4.226503e-13 1.005954e-06 2.305999e-07 7.734546e-04 8.177387e-01 1.217490e-11 5.979275e-09 6.298399e-13 1.801661e-67 0.02567853 0.02386925 5.739097e-09 1.05584164 0.91165846 1.005954e-06 -0.440851555 -0.160347695 3.498325e-11 0.6275903 0.34586527 -0.2926735 1 0.7240913 0.8734954 -0.8432301 0.6569277 0.48031454 0.27410603 0.225659311 -0.281165916 0.7240913 1 0.3843311 -0.37085097 0.7941333 0.66847743 0.114433440 0.1459089188 -0.1411514340 0.8734954 0.3843311 1 -0.9350518 0.3309064 0.26187649 0.159592904 0.073823794 -0.154480924 -0.8432301 -0.37085097 -0.9350518 1 -0.31645395 -0.23535401 -0.161480209 -0.076718307 0.165838357 0.6569277 0.7941333 0.3309064 -0.31645395 1 0.5693894 0.086956081 0.116373139 -0.1122112891 0.48031454 0.66847743 0.26187649 -0.23535401 0.5693894 1 0.035963112 0.025039760 -0.0401239525 0.27410603 0.114433440 0.159592904 -0.161480209 0.086956081 0.035963112 1 0.697473880 -0.77690183 0.225659311 0.1459089188 0.073823794 -0.076718307 0.116373139 0.025039760 0.697473880 1 -0.7390457 -0.281165916 -0.1411514340 -0.154480924 0.165838357 -0.1122112891 -0.0401239525 -0.77690183 -0.7390457 1 both 0.3895853 0.2726743 0.33847637 0.119636964 0.35326913 0.31282953 0.4191578 0.19059406 0.3550775 0.8090541 0.41482347 0.080036486 0.259084856 0.4199317 0.160136619 3111 606 606 2580 1743 0.6342012 0.04492948 0.1085191099 -10.5 44.0 54.5 0.05487259 2.591171e-02 0.0000000000 0.05858840 1.409955e-02 2.1674324 0.5602700 0.6926157 0.4462633 0.5654131 0.4523840 154 77 0.3925120 0.6604723 0.7393841 0.7495635 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.094503375 0.04982321 0.6745700 0.7248639 0.6236080 0.9525999 0.9679757 0.9977728 0.14749113 0.13884007 0.8511312 0.9293081 0.9429039 0.7430781 0.54088933 0.26552721 0.19352634 0.11920359 0.05606633 0.4390871 0.6571700 0.3275024 0.00 10.0 41.00 NA NA NA 210007 Streptococcus mutans UA159 0.8056122 0.6867977 0.8061224 0.6319539 0.4726118 2.387873e-01 8.937940e-08 0.373132834 0.232420380 0.34822096 0.1419172449 1.859644e-37 4.020956e-39 9.382812e-15 1.916328e-38 1.598110e-10 2.116235e-17 2.977334e-04 2.431957e-05 1.389792e-21 1.190580e-03 3.591599e-02 1.174771e-02 2.338521e-01 5.920124e-01 5.817254e-03 1.085358e-03 7.602295e-08 1.859644e-37 0.35015132 0.42216378 1.336002e-02 0.64347267 0.75831654 3.591599e-02 0.062325625 0.028110873 7.213509e-08 0.7671246 0.67581621 -1.0697065 1 0.8914170 0.7690568 -0.7587330 0.7851478 0.54108200 0.14378005 0.040486493 -0.098767428 0.8914170 1 0.4284575 -0.41966838 0.8495298 0.61236826 0.091838043 0.0485030092 -0.0729719385 0.7690568 0.4284575 1 -0.9809466 0.3829664 0.27813952 0.109604183 -0.011797331 -0.069698790 -0.7587330 -0.41966838 -0.9809466 1 -0.37308506 -0.27574157 -0.098803241 0.019392458 0.060158130 0.7851478 0.8495298 0.3829664 -0.37308506 1 0.5701756 0.124028796 0.019121461 -0.0698763439 0.54108200 0.61236826 0.27813952 -0.27574157 0.5701756 1 0.115473613 0.021501512 -0.0549390747 0.14378005 0.091838043 0.109604183 -0.098803241 0.124028796 0.115473613 1 0.008665145 -0.23270245 0.040486493 0.0485030092 -0.011797331 0.019392458 0.019121461 0.021501512 0.008665145 1 -0.7520453 -0.098767428 -0.0729719385 -0.069698790 0.060158130 -0.0698763439 -0.0549390747 -0.23270245 -0.7520453 1 both 0.2405063 0.2815498 0.44620253 0.150000000 0.45965418 0.34895833 0.5164557 0.23684211 0.4622449 0.7581444 0.16764517 0.124907722 0.266640252 0.5273882 -0.054776321 1580 190 190 1579 381 0.8784810 0.05260867 0.7389223377 5.0 55.0 50.0 0.13813341 3.203473e-03 0.0399181942 0.11590418 2.152456e-02 4.5334479 0.4810127 0.7353494 0.5260197 0.4810127 0.5144077 100 50 0.6672492 0.5619123 0.7608660 0.7615138 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.060759494 0.03734177 0.7213484 0.6367369 0.7225806 0.9195413 0.8783357 0.9677419 0.09654179 0.10937500 0.8875360 0.9099327 0.9033382 0.6198190 0.52033934 0.33131278 0.20566716 0.15516869 0.09124416 0.4158228 0.6127660 0.2571429 -3.00 10.0 42.00 NA NA NA 211110 Streptococcus agalactiae NEM316 0.8213945 0.7065888 0.8271251 0.6686455 0.4966724 3.577774e-02 4.515899e-02 0.478758483 0.141878748 0.36838761 0.1537605520 5.850051e-32 2.075070e-34 3.286099e-10 5.395118e-33 1.957042e-04 8.547085e-09 2.421791e-06 2.381257e-02 1.221893e-12 3.397573e-04 3.924828e-01 6.722360e-03 1.360275e-02 1.275242e-01 6.472313e-06 4.681085e-02 4.735159e-03 5.850051e-32 0.18751588 0.21771627 1.799043e-04 0.92439530 1.00377073 3.924828e-01 -0.278012052 -0.096096112 1.173398e-02 0.4713084 0.25242565 -0.4432519 1 0.8383889 0.8035148 -0.8035501 0.7589063 0.45461778 0.18057151 0.143983476 -0.173730995 0.8383889 1 0.4227589 -0.42375398 0.8603847 0.57853160 0.072926302 0.0634527885 -0.0866129664 0.8035148 0.4227589 1 -0.9984597 0.3641516 0.21421106 0.106910283 0.058472276 -0.105978854 -0.8035501 -0.42375398 -0.9984597 1 -0.36482634 -0.21655236 -0.104942532 -0.056374017 0.103959189 0.7589063 0.8603847 0.3641516 -0.36482634 1 0.6428171 0.030304821 0.015505408 -0.0391176115 0.45461778 0.57853160 0.21421106 -0.21655236 0.6428171 1 -0.043706902 -0.061992207 0.0340355567 0.18057151 0.072926302 0.106910283 -0.104942532 0.030304821 -0.043706902 1 0.787901404 -0.86810673 0.143983476 0.0634527885 0.058472276 -0.056374017 0.015505408 -0.061992207 0.787901404 1 -0.7993088 -0.173730995 -0.0866129664 -0.105978854 0.103959189 -0.0391176115 0.0340355567 -0.86810673 -0.7993088 1 both 0.2090069 0.2396252 0.43475751 0.165745856 0.43302991 0.44845361 0.4486143 0.19337017 0.4044890 0.7830463 0.26367501 0.097328540 0.253957238 0.5033276 -0.006655189 1732 181 181 1720 374 0.8879908 0.03657850 0.9752688001 2.0 48.0 46.0 0.04979690 7.864270e-01 0.0000000000 0.04811443 8.200203e-01 2.7423808 0.5427252 0.7947204 0.6253505 0.5484988 0.6158345 100 50 0.5429655 0.6170728 0.7376726 0.7412885 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.053695150 0.04503464 0.6289220 0.6101297 0.5438596 0.8853954 0.8567761 0.9824561 0.09882965 0.09793814 0.8967420 0.8728242 0.8518080 0.7331292 0.61513455 0.29420957 0.10266961 0.05438178 0.03320327 0.4486143 0.6308101 0.3084780 0.00 12.0 38.00 NA NA NA 211586 Shewanella oneidensis MR-1 0.5714616 0.5102135 0.6850139 0.5298976 0.5209981 9.119392e-01 2.426791e-01 0.209227242 0.032831608 0.23273354 0.0175090446 2.696900e-71 1.712180e-67 1.828071e-41 8.881819e-53 1.310029e-20 1.104300e-37 7.692905e-10 8.669940e-12 1.428032e-38 1.600350e-04 2.159757e-02 4.307697e-03 5.044715e-05 7.492726e-01 1.602922e-04 4.964662e-06 3.230672e-13 2.696900e-71 0.38563750 0.31795778 4.993863e-05 1.09016861 0.77803996 2.159757e-02 -0.853457984 -0.365595604 2.259834e-12 0.6662558 0.37528120 -0.2465389 1 0.7239361 0.8714682 -0.8381845 0.6746955 0.52450946 0.27878199 0.250073248 -0.285817815 0.7239361 1 0.3785266 -0.36190547 0.8075559 0.70974769 0.171880717 0.1540605523 -0.1651996163 0.8714682 0.3785266 1 -0.9527040 0.3373166 0.28990238 0.118052839 0.093386930 -0.147674870 -0.8381845 -0.36190547 -0.9527040 1 -0.31356873 -0.27914789 -0.116519631 -0.090724632 0.150347100 0.6746955 0.8075559 0.3373166 -0.31356873 1 0.6280004 0.169120903 0.155115034 -0.1584392418 0.52450946 0.70974769 0.28990238 -0.27914789 0.6280004 1 0.139637846 0.132370919 -0.1338006571 0.27878199 0.171880717 0.118052839 -0.116519631 0.169120903 0.139637846 1 0.946814278 -0.91688143 0.250073248 0.1540605523 0.093386930 -0.090724632 0.155115034 0.132370919 0.946814278 1 -0.8033618 -0.285817815 -0.1651996163 -0.147674870 0.150347100 -0.1584392418 -0.1338006571 -0.91688143 -0.8033618 1 both 0.4598244 0.2685588 0.29203241 0.084434655 0.31246506 0.26086957 0.3750844 0.14390602 0.3022664 0.8162247 0.34379837 0.068931256 0.237221890 0.4790019 0.041996216 2962 684 678 2471 1853 0.6039838 0.06160647 0.0092357856 -16.0 66.0 82.0 0.07477209 7.253861e-04 0.0000000000 0.05256048 3.990232e-02 2.3127932 0.5010128 0.6273138 0.4421537 0.5016880 0.4480932 148 74 0.4319147 0.5826079 0.6955767 0.7041527 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.053004727 0.04186361 0.6362752 0.6573443 0.5658363 0.9214471 0.9537636 1.0000000 0.09334824 0.09718670 0.8005126 0.9049985 0.9401590 0.7992609 0.58770257 0.42780528 0.24894096 0.15675936 0.06284405 0.3436867 0.5491329 0.2589413 3.00 18.5 79.50 NA NA NA 212717 Clostridium tetani E88 0.8112094 0.6937026 0.7758112 0.5170960 0.3455328 3.553576e-02 3.865560e-45 0.455956469 -0.036569201 0.23193862 -0.0178238121 5.228713e-59 2.112017e-57 7.637865e-32 7.513998e-59 5.043878e-22 9.269320e-23 2.584860e-07 1.492375e-07 1.338883e-21 8.023327e-05 3.304017e-06 2.199554e-03 4.932542e-01 4.701051e-01 3.004712e-05 1.511346e-05 1.769548e-05 5.228713e-59 0.66874494 0.89868036 6.377708e-01 0.15362581 0.18082886 3.304017e-06 0.447219271 0.264834891 1.285310e-05 0.5748501 0.37479136 -1.0319699 1 0.9403466 0.5449274 -0.5387154 0.8212284 0.66921613 0.17919596 0.025125178 -0.076473084 0.9403466 1 0.2902724 -0.28435053 0.8714463 0.70136310 0.095569302 0.0016503198 -0.0399193363 0.5449274 0.2902724 1 -0.9291514 0.2772290 0.23437020 0.006181415 0.020735274 -0.059929600 -0.5387154 -0.28435053 -0.9291514 1 -0.27640629 -0.22310476 -0.018980522 -0.038940286 0.078596607 0.8212284 0.8714463 0.2772290 -0.27640629 1 0.5461894 0.105788030 -0.011106155 -0.0179426235 0.66921613 0.70136310 0.23437020 -0.22310476 0.5461894 1 0.080032371 -0.022609335 -0.0045649899 0.17919596 0.095569302 0.006181415 -0.018980522 0.105788030 0.080032371 1 -0.103368062 -0.02688282 0.025125178 0.0016503198 0.020735274 -0.038940286 -0.011106155 -0.022609335 -0.103368062 1 -0.7935379 -0.076473084 -0.0399193363 -0.059929600 0.078596607 -0.0179426235 -0.0045649899 -0.02688282 -0.7935379 1 both 0.2889734 0.3185991 0.34003259 0.037593985 0.35162847 0.23497268 0.5670831 0.26315789 0.4989465 0.6962910 -0.11392979 0.172228223 0.222626660 0.5618534 -0.123706854 1841 268 264 1925 448 0.9005975 0.12503708 0.0115600414 28.5 58.5 30.0 0.16559223 2.375206e-04 0.0824569773 0.11665579 2.253931e-02 2.5812417 0.4215100 0.6789737 0.7323034 0.4155350 0.7308320 100 50 0.8109155 0.3370309 0.8318729 0.8330580 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.034763715 0.01357958 0.4137979 0.5071055 0.4382022 0.4753629 0.5491858 0.5280899 0.04523522 0.07650273 0.6794547 0.6803610 0.6814266 0.6547878 0.61584703 0.36086527 0.27644347 0.28013870 0.26447247 0.3775122 0.5431310 0.2921811 3.00 19.0 71.25 NA NA NA 214092 Yersinia pestis CO92 0.5755470 0.5114147 0.7178893 0.5980875 0.5886658 7.326797e-01 9.935196e-03 0.238775024 0.029032732 0.27909114 0.0386709106 1.525046e-65 1.229069e-75 8.854399e-36 4.732731e-60 1.468072e-14 1.086196e-28 3.688031e-11 1.921397e-12 7.377066e-54 2.186039e-15 2.900262e-09 4.229109e-02 2.639326e-04 4.423810e-01 7.349738e-06 3.050008e-07 2.900287e-26 1.525046e-65 0.25450790 0.26067353 3.924283e-08 0.75982984 0.67690786 2.900262e-09 -0.209785774 -0.086540305 4.473249e-23 0.7504000 0.56071905 -0.5012697 1 0.7943376 0.8442342 -0.8442342 0.6609499 0.51923217 0.31316563 0.249992473 -0.310844944 0.7943376 1 0.4118612 -0.41186117 0.7684059 0.70321029 0.174805552 0.1518627187 -0.1806511540 0.8442342 0.4118612 1 -1.0000000 0.3233375 0.27187301 0.178763001 0.097735025 -0.186161915 -0.8442342 -0.41186117 -1.0000000 1 -0.32333752 -0.27187301 -0.178763001 -0.097735025 0.186161915 0.6609499 0.7684059 0.3233375 -0.32333752 1 0.6054212 0.120073296 0.131633687 -0.1432057894 0.51923217 0.70321029 0.27187301 -0.27187301 0.6054212 1 0.070721528 0.085088899 -0.1093605390 0.31316563 0.174805552 0.178763001 -0.178763001 0.120073296 0.070721528 1 0.769555527 -0.84341340 0.249992473 0.1518627187 0.097735025 -0.097735025 0.131633687 0.085088899 0.769555527 1 -0.7681270 -0.310844944 -0.1806511540 -0.186161915 0.186161915 -0.1432057894 -0.1093605390 -0.84341340 -0.7681270 1 both 0.3929724 0.3110368 0.36034421 0.125000000 0.38767042 0.31851180 0.4112585 0.13321168 0.3328185 0.8667638 0.39440365 0.054794521 0.301669473 0.4113342 0.177331571 2789 548 548 2236 1649 0.6048763 0.02867126 0.6436194198 -2.0 79.0 81.0 0.06688921 5.135506e-03 0.0098617145 0.06915862 3.402708e-03 3.3194286 0.5941198 0.7271253 0.5114954 0.5944783 0.5110603 138 69 0.4599774 0.6009708 0.7145347 0.7290698 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.095733238 0.03477949 0.7201964 0.7717198 0.7197802 0.9666118 0.9626610 0.9972527 0.12211025 0.14337568 0.9649434 0.9433669 0.9157304 0.7476508 0.64171079 0.50799861 0.39068922 0.27844967 0.11543079 0.3757619 0.5542289 0.2752242 0.00 15.0 94.00 NA NA NA 216895 Vibrio vulnificus CMCP6 0.5955477 0.5182587 0.6777606 0.5046464 0.4885125 2.674944e-01 1.862528e-01 0.356112458 0.147812244 0.35340954 0.1320470111 1.406131e-76 1.563247e-80 1.945759e-50 2.524185e-69 4.395367e-21 2.145731e-41 1.928235e-12 1.635042e-16 1.397471e-50 3.263194e-12 4.029979e-10 2.304971e-02 6.284006e-05 9.566756e-01 7.293596e-08 6.528725e-11 5.027103e-21 1.406131e-76 0.37348303 0.31263570 1.922496e-03 0.73959982 0.55406586 4.029979e-10 -0.142197859 -0.067472823 9.005790e-21 0.7227728 0.44818839 -0.4883466 1 0.8345195 0.7692595 -0.7321643 0.6959941 0.62489446 0.20948637 0.176490890 -0.218575014 0.8345195 1 0.3747398 -0.35213730 0.7525995 0.76460547 0.116851510 0.1240026385 -0.1314977672 0.7692595 0.3747398 1 -0.8817721 0.3169115 0.29403215 0.103121142 0.065016780 -0.135748597 -0.7321643 -0.35213730 -0.8817721 1 -0.26444884 -0.26850792 -0.109544147 -0.067248320 0.141648380 0.6959941 0.7525995 0.3169115 -0.26444884 1 0.5895137 0.104056277 0.123937463 -0.1167933214 0.62489446 0.76460547 0.29403215 -0.26850792 0.5895137 1 0.058797866 0.089963959 -0.0837579529 0.20948637 0.116851510 0.103121142 -0.109544147 0.104056277 0.058797866 1 0.663437691 -0.76490304 0.176490890 0.1240026385 0.065016780 -0.067248320 0.123937463 0.089963959 0.663437691 1 -0.7663048 -0.218575014 -0.1314977672 -0.135748597 0.141648380 -0.1167933214 -0.0837579529 -0.76490304 -0.7663048 1 both 0.4754472 0.2964115 0.29983740 0.090287278 0.31742001 0.26853526 0.5092683 0.25649795 0.4278157 0.7423843 0.22505107 0.131195496 0.246877300 0.5114875 -0.022975015 3075 731 731 2702 1835 0.6403252 0.05461094 0.0292738487 -11.0 63.0 74.0 0.06076510 1.070803e-02 0.0000000000 0.05069307 5.251190e-02 2.2457711 0.5281301 0.6172434 0.5560411 0.5235772 0.5584589 152 76 0.5380403 0.5222717 0.6608609 0.6651812 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.057560976 0.03707317 0.6025892 0.6173234 0.5738832 0.7802202 0.7930634 0.9209622 0.09801930 0.08860759 0.7048797 0.7593760 0.7885227 0.7804756 0.69639859 0.50965708 0.28221314 0.18232318 0.05816690 0.3746341 0.5466377 0.3009754 3.00 20.0 67.00 NA NA NA 218496 Tropheryma whipplei TW08/27 0.7496807 0.6246809 0.7624521 0.5893066 0.4814433 9.260653e-01 2.435348e-14 0.220361096 -0.009275929 0.22191258 0.0009192320 1.664814e-15 2.362781e-16 1.582205e-06 1.374698e-15 6.531473e-05 8.647402e-06 6.394397e-02 8.676374e-03 1.007829e-13 1.768937e-02 5.153807e-01 1.816459e-01 2.977436e-01 4.820986e-01 9.915361e-02 3.835063e-02 1.792178e-05 1.664814e-15 0.28083563 0.24064043 1.540736e-02 0.83579874 0.60032074 5.153807e-01 -0.957349002 -0.128473958 8.436359e-05 0.6973925 0.60062538 0.1465083 1 0.9125902 0.5995933 -0.5579835 0.8003423 0.52341463 0.11848707 0.041357419 -0.076810035 0.9125902 1 0.3167808 -0.28868864 0.8170048 0.57328753 0.025997523 -0.0003407906 -0.0301554277 0.5995933 0.3167808 1 -0.7109229 0.3052461 0.25772440 0.063833883 0.043357187 -0.026256609 -0.5579835 -0.28868864 -0.7109229 1 -0.26868683 -0.23039166 -0.021132397 0.032570876 -0.001127334 0.8003423 0.8170048 0.3052461 -0.26868683 1 0.5362981 0.047913495 0.019137896 -0.0496135295 0.52341463 0.57328753 0.25772440 -0.23039166 0.5362981 1 0.012361153 -0.054220204 0.0197033165 0.11848707 0.025997523 0.063833883 -0.021132397 0.047913495 0.012361153 1 0.267914677 -0.31947206 0.041357419 -0.0003407906 0.043357187 0.032570876 0.019137896 -0.054220204 0.267914677 1 -0.7982618 -0.076810035 -0.0301554277 -0.026256609 -0.001127334 -0.0496135295 0.0197033165 -0.31947206 -0.7982618 1 both 0.3115578 0.2981877 0.37520938 0.112903226 0.37931034 0.35576923 0.4489112 0.13978495 0.3754789 0.8385284 0.19056556 0.072486414 0.303938395 0.5185567 -0.037113304 597 93 93 587 196 0.8257956 0.09069278 0.4799002007 -10.0 33.0 43.0 0.08753316 5.260395e-01 0.0000000000 0.11893431 1.760086e-01 6.4125547 0.4120603 0.6891176 0.4059759 0.4154104 0.4100611 100 50 0.6562386 0.3764128 0.6690642 0.6690441 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.098827471 0.03182580 0.5116788 0.8066702 0.5512821 0.6028461 0.8729787 0.5512821 0.13793103 0.09615385 0.6584561 0.6642538 0.6710734 0.6705183 0.65306872 0.35637954 0.21092000 0.18486901 0.17287283 0.4790620 0.6071429 0.4021448 0.00 12.0 45.00 NA NA NA 220668 Lactobacillus plantarum WCFS1 0.7384513 0.6137181 0.7401130 0.5412728 0.4421068 4.941838e-02 1.006666e-30 0.273351340 -0.008730388 0.26421766 -0.0249826939 5.056578e-55 7.088510e-61 1.000000e+00 9.490243e-61 2.093692e-27 6.253217e-31 8.724711e-12 1.262886e-07 8.989735e-11 1.755934e-08 1.000000e+00 2.200062e-07 7.392573e-01 1.063671e-01 1.061968e-06 5.404813e-04 1.160816e-02 5.056578e-55 0.33362090 0.40666166 1.755934e-08 0.73834918 0.75384859 NA NA NA 1.292423e-02 0.5035546 0.17975001 -0.5622977 1 0.7721694 0.7217720 -0.7216911 0.7943961 NA 0.34482100 0.304345630 -0.303139242 0.7721694 1 0.2949744 -0.29807590 0.8571376 NA 0.159723358 0.1158858383 -0.1219956016 0.7217720 0.2949744 1 -0.9672996 0.3298094 NA 0.094479975 0.074295646 -0.098106138 -0.7216911 -0.29807590 -0.9672996 1 -0.33704118 NA -0.095947370 -0.073633909 0.102837864 0.7943961 0.8571376 0.3298094 -0.33704118 1 NA 0.168960285 0.137597657 -0.1459749757 NA NA NA NA NA NA NA NA NA 0.34482100 0.159723358 0.094479975 -0.095947370 0.168960285 NA 1 0.780968341 -0.75677823 0.304345630 0.1158858383 0.074295646 -0.073633909 0.137597657 NA 0.780968341 1 -0.7944182 -0.303139242 -0.1219956016 -0.098106138 0.102837864 -0.1459749757 NA -0.75677823 -0.7944182 1 both 0.3511450 0.2656011 0.33183655 0.080562660 0.35956284 0.20403023 0.4315222 0.19565217 0.3702227 0.7470513 0.21062851 0.109153008 0.213216211 0.5578932 -0.115786303 2227 391 391 2222 787 0.8217333 0.03560584 0.8026079846 2.0 60.0 58.0 0.16278647 6.197255e-08 0.0000000000 0.15671498 2.197211e-07 4.0079437 0.3233049 0.6730057 0.4193774 0.3412663 0.4095611 110 55 0.6159154 0.3874325 0.6463409 0.6587797 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.058374495 0.02873821 0.5757979 0.6274904 0.5515464 0.7017181 0.7490326 0.6340206 0.08688525 0.08816121 0.7133649 0.7231980 0.7265689 0.6431674 0.53298812 0.38231318 0.27678567 0.26057862 0.24309761 0.4122137 0.6211096 0.3084677 0.00 15.0 37.00 NA NA NA 223283 Pseudomonas syringae pv. tomato str. DC3000 0.5452385 0.5040930 0.6914641 0.5499556 0.5464276 5.486929e-01 1.847100e-06 0.488953001 0.223297875 0.43448995 0.1984258026 1.695431e-96 5.127394e-102 1.623524e-45 5.391104e-98 2.332253e-30 3.401829e-55 1.121157e-17 1.932627e-20 1.532919e-48 8.867156e-14 1.089909e-10 5.206774e-07 1.393428e-01 8.756125e-04 2.738437e-13 1.828250e-15 9.579742e-18 1.695431e-96 0.53469255 0.49543216 4.943997e-06 0.42431178 0.33758292 1.089909e-10 0.265730188 0.108755164 8.755423e-16 0.6487546 0.35900607 -0.6520108 1 0.7513679 0.8526161 -0.8191906 0.6806034 0.51278187 0.20701315 0.062362044 -0.149320376 0.7513679 1 0.3628102 -0.33977882 0.8019444 0.73274896 0.076516715 0.0337807446 -0.0586974335 0.8526161 0.3628102 1 -0.9582601 0.3244915 0.23907660 0.144296840 0.009385837 -0.117808180 -0.8191906 -0.33977882 -0.9582601 1 -0.30198026 -0.21942904 -0.144408540 -0.007765351 0.112397202 0.6806034 0.8019444 0.3244915 -0.30198026 1 0.4868046 0.061547960 0.021937722 -0.0426315893 0.51278187 0.73274896 0.23907660 -0.21942904 0.4868046 1 0.048617030 -0.008909854 0.0082709280 0.20701315 0.076516715 0.144296840 -0.144408540 0.061547960 0.048617030 1 0.188657975 -0.27888982 0.062362044 0.0337807446 0.009385837 -0.007765351 0.021937722 -0.008909854 0.188657975 1 -0.7002206 -0.149320376 -0.0586974335 -0.117808180 0.112397202 -0.0426315893 0.0082709280 -0.27888982 -0.7002206 1 both 0.4462067 0.2874979 0.32064499 0.086492891 0.35219832 0.27963526 0.4448850 0.18187204 0.3637361 0.8145765 0.33152542 0.082492136 0.279900740 0.4535724 0.092855211 3783 844 844 2983 2488 0.5651599 0.04646703 0.0360952094 -7.0 48.0 55.0 0.06907714 2.804408e-04 0.0746280380 0.07812574 2.356381e-05 2.6474212 0.5400476 0.6853907 0.4861108 0.5403119 0.4862879 188 94 0.4715261 0.5663199 0.6932980 0.6992376 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.123975681 0.04203013 0.6630214 0.7049141 0.6958599 0.9490254 0.9635409 1.0000000 0.16417212 0.16838906 0.7977991 0.9348355 0.9427592 0.6577828 0.46968923 0.32970056 0.27506445 0.17768290 0.06124611 0.4210944 0.6323166 0.3214008 -3.00 11.5 53.75 NA NA NA 223926 Vibrio parahaemolyticus RIMD 2210633 0.5933361 0.5174233 0.6659768 0.4776994 0.4622294 8.865597e-01 2.189606e-02 0.285640466 -0.002623526 0.32564670 0.0101203003 1.019275e-94 5.578940e-103 6.603432e-72 4.330278e-93 2.753131e-30 1.457681e-52 6.262700e-25 5.614071e-31 3.789623e-52 2.596466e-16 1.168152e-14 6.365236e-07 1.520343e-03 5.288907e-01 2.603950e-12 1.032310e-16 5.971930e-15 1.019275e-94 0.42075780 0.37618593 5.047153e-03 0.57817114 0.48050196 1.168152e-14 0.043076764 0.025047093 2.824108e-13 0.5788066 0.35341662 -0.3864114 1 0.8766052 0.6659121 -0.6287254 0.7526282 0.70640791 0.37061412 0.328658494 -0.379580189 0.8766052 1 0.3315973 -0.30464146 0.7906885 0.80728704 0.217672333 0.1992840917 -0.2170752513 0.6659121 0.3315973 1 -0.9052151 0.2871856 0.26602586 0.153348531 0.087735339 -0.196673702 -0.6287254 -0.30464146 -0.9052151 1 -0.25682016 -0.24345132 -0.143661496 -0.075696685 0.187547359 0.7526282 0.7906885 0.2871856 -0.25682016 1 0.5852898 0.202204267 0.208212774 -0.1909643793 0.70640791 0.80728704 0.26602586 -0.24345132 0.5852898 1 0.175027270 0.166532452 -0.1610694315 0.37061412 0.217672333 0.153348531 -0.143661496 0.202204267 0.175027270 1 0.862423592 -0.88232064 0.328658494 0.1992840917 0.087735339 -0.075696685 0.208212774 0.166532452 0.862423592 1 -0.7520755 -0.379580189 -0.2170752513 -0.196673702 0.187547359 -0.1909643793 -0.1610694315 -0.88232064 -0.7520755 1 both 0.5015538 0.3075872 0.30888751 0.077447336 0.32993197 0.27155172 0.5093226 0.22986369 0.4159768 0.7572974 0.15594927 0.123613932 0.262094698 0.5377706 -0.075541161 3218 807 807 2867 1965 0.6395277 0.07650632 0.0003383957 -24.0 45.5 69.5 0.07253108 8.150501e-04 0.0009244971 0.07608911 3.719187e-04 2.5965042 0.4378496 0.6117073 0.4163828 0.4334991 0.4331418 160 80 0.5980234 0.3572070 0.6556154 0.6664141 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.052206339 0.03791175 0.5718605 0.6315513 0.6000000 0.7111977 0.7643332 0.7241379 0.09232264 0.08620690 0.6457129 0.7013070 0.7238563 0.6622812 0.56235936 0.45699977 0.35639737 0.23436065 0.10742572 0.3962088 0.5895372 0.3098022 2.00 18.0 69.00 NA NA NA 224326 Borrelia burgdorferi B31 0.6705882 0.5582007 0.7294118 0.5811105 0.5312930 3.622134e-01 4.628877e-52 0.299772499 -0.196908152 0.32398941 -0.3355980841 2.063732e-18 7.388994e-22 1.000000e+00 3.702488e-18 1.912784e-02 7.171126e-08 5.774343e-20 1.139112e-16 9.201001e-12 5.537251e-05 1.000000e+00 7.553861e-02 4.415059e-03 9.698413e-01 1.759867e-21 5.980101e-16 1.458615e-03 2.063732e-18 -0.44429157 -0.41580602 5.537251e-05 1.61829591 1.47329283 NA NA NA 2.095920e-03 0.6220538 0.43984203 -0.7141711 1 0.8902546 0.5391796 -0.3456792 0.7732413 NA 0.26406952 -0.208591003 0.075210592 0.8902546 1 0.2362874 -0.16386265 0.8165723 NA 0.168917426 -0.1393497981 0.0243459334 0.5391796 0.2362874 1 -0.4954958 0.2495786 NA 0.009924046 0.012287831 0.004523673 -0.3456792 -0.16386265 -0.4954958 1 -0.12199971 NA 0.025507646 -0.017912611 0.052783172 0.7732413 0.8165723 0.2495786 -0.12199971 1 NA 0.148948462 -0.145506796 0.0086649836 NA NA NA NA NA NA NA NA NA 0.26406952 0.168917426 0.009924046 0.025507646 0.148948462 NA 1 -0.614510677 0.39340924 -0.208591003 -0.1393497981 0.012287831 -0.017912611 -0.145506796 NA -0.614510677 1 -0.7242114 0.075210592 0.0243459334 0.004523673 0.052783172 0.0086649836 NA 0.39340924 -0.7242114 1 both 0.3709677 0.3046749 0.27741935 0.039130435 0.31497797 0.17469880 0.3193548 0.04782609 0.2458824 0.9298072 0.34431235 0.022416424 0.274521990 0.4687070 0.062585900 620 115 115 570 280 0.7322581 0.08561117 0.3350687088 -1.0 12.0 13.0 0.14922244 8.912879e-03 0.0000000000 0.14027918 1.672541e-02 7.4931403 0.5467742 0.6976525 0.5279360 0.5000000 0.4750237 100 50 0.4724175 0.2834710 0.5556392 0.5649172 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.095161290 0.03387097 0.5568338 0.6528851 0.3750000 0.5842466 0.7142935 0.7125000 0.11894273 0.15662651 0.5080346 0.5750980 0.6452943 0.5478959 0.35901066 0.24824717 0.23318131 0.22822259 0.23066015 0.6258065 0.7732558 0.5691964 0.00 6.5 21.00 NA NA NA 224915 Buchnera aphidicola str. Bp (Baizongia pistaciae) 0.6388889 0.5385802 0.7222222 0.5843980 0.5510677 8.477603e-02 1.137133e-07 0.185211172 -0.133941436 0.24760356 -0.1241958774 5.187035e-27 9.841128e-29 1.901538e-22 3.526471e-27 1.006971e-04 4.448721e-08 1.549431e-04 3.510993e-04 1.831677e-11 1.336114e-03 2.681569e-02 4.356697e-02 7.019307e-01 8.692424e-01 2.646646e-04 8.598004e-04 7.550828e-02 5.187035e-27 0.11146379 0.13813721 3.750221e-03 1.71962973 2.18984594 2.681569e-02 -0.734342874 -0.785063152 2.090326e-01 0.2557242 0.19745037 -0.1755737 1 0.9414387 0.7141382 -0.6966309 0.8975834 0.76780437 0.05783682 -0.027943417 -0.013205849 0.9414387 1 0.4643244 -0.45400099 0.9540023 0.77305150 0.032945871 -0.0393388055 -0.0248006363 0.7141382 0.4643244 1 -0.9210734 0.4476388 0.43585133 0.008465463 0.003176244 0.008137341 -0.6966309 -0.45400099 -0.9210734 1 -0.43995958 -0.44762671 -0.002701468 -0.045973481 0.007439473 0.8975834 0.9540023 0.4476388 -0.43995958 1 0.7752094 0.015357370 -0.021624307 -0.0206605857 0.76780437 0.77305150 0.43585133 -0.44762671 0.7752094 1 0.032707473 0.018484611 -0.0476177849 0.05783682 0.032945871 0.008465463 -0.002701468 0.015357370 0.032707473 1 -0.525311432 0.41515054 -0.027943417 -0.0393388055 0.003176244 -0.045973481 -0.021624307 0.018484611 -0.525311432 1 -0.7505421 -0.013205849 -0.0248006363 0.008137341 0.007439473 -0.0206605857 -0.0476177849 0.41515054 -0.7505421 1 both 0.3846154 0.4666101 0.60164835 0.164285714 0.57768924 0.65486726 0.4450549 0.03571429 0.3313492 0.9639746 0.21992450 0.022252747 0.400549451 0.4551518 0.089696424 364 70 70 322 182 0.6895604 0.09579382 0.4720347785 13.0 85.0 72.0 0.11176533 2.846918e-01 -0.0786950994 0.10866269 3.163459e-01 2.3649652 0.6071429 0.9051476 0.7308170 0.6071429 0.7285368 100 50 0.7860077 0.5131577 0.8268095 0.8280326 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.043956044 0.01373626 0.8932671 0.9158506 0.9523810 0.9523914 0.9810666 0.9523810 0.04382470 0.08849558 0.8084209 0.8303155 0.8392001 0.8358144 0.70344574 0.42530272 0.23730507 0.20410513 0.19830973 0.3076923 0.4200913 0.1379310 5.00 30.0 85.00 NA NA NA 226185 Enterococcus faecalis V583 0.8059749 0.6872413 0.7899133 0.5800520 0.4155880 1.832990e-02 1.080144e-03 0.494087985 0.215970948 0.26322646 0.0290265038 1.196280e-43 1.213571e-47 1.000000e+00 2.611801e-43 5.425899e-11 4.687030e-20 2.032142e-07 4.067888e-06 3.548452e-22 9.473942e-06 1.000000e+00 2.736268e-01 3.045099e-01 9.150202e-01 9.202584e-06 4.051033e-04 8.931562e-07 1.196280e-43 0.16136301 0.13621244 9.473942e-06 0.73290782 0.66793092 NA NA NA 3.000906e-06 0.6035041 0.34967716 -0.6553036 1 0.8763100 0.7187375 -0.7022527 0.7449826 NA 0.23477834 0.181918002 -0.207155019 0.8763100 1 0.3597740 -0.35019323 0.8453680 NA 0.143803945 0.1068497093 -0.1056677917 0.7187375 0.3597740 1 -0.9187758 0.2967287 NA 0.081580805 0.049197124 -0.110496090 -0.7022527 -0.35019323 -0.9187758 1 -0.28159534 NA -0.077360301 -0.052352086 0.111224338 0.7449826 0.8453680 0.2967287 -0.28159534 1 NA 0.145104666 0.092697826 -0.1021025279 NA NA NA NA NA NA NA NA NA 0.23477834 0.143803945 0.081580805 -0.077360301 0.145104666 NA 1 0.636052090 -0.63861572 0.181918002 0.1068497093 0.049197124 -0.052352086 0.092697826 NA 0.636052090 1 -0.8056347 -0.207155019 -0.1056677917 -0.110496090 0.111224338 -0.1021025279 NA -0.63861572 -0.8056347 1 both 0.2659618 0.2402038 0.35258235 0.134556575 0.36313618 0.26978417 0.3721025 0.14373089 0.3241246 0.7742610 0.20303243 0.083998057 0.204106366 0.5844120 -0.168824031 2459 327 327 2509 604 0.8869459 0.04162832 0.7863037007 -9.5 33.0 42.5 0.10573165 8.068597e-03 0.0000000000 0.11251851 3.886545e-03 3.3454282 0.4550630 0.7495581 0.5116102 0.4481497 0.5312594 122 61 0.6185192 0.4787425 0.6514646 0.6695331 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.052053680 0.03334689 0.5729671 0.5414893 0.5476190 0.7411475 0.7381522 0.8761905 0.08298945 0.10431655 0.7356515 0.7637872 0.7687061 0.7062143 0.54031172 0.28812478 0.20626481 0.12682516 0.06575483 0.4672631 0.6562860 0.3643216 0.00 15.0 34.00 NA NA NA 226186 Bacteroides thetaiotaomicron VPI-5482 0.5893679 0.5159733 0.7580578 0.6716256 0.6597742 1.574547e-01 1.396295e-15 0.459616050 0.198047632 0.40117692 0.1400349668 5.479133e-30 3.029681e-11 1.000000e+00 4.526092e-30 2.308210e-04 1.520007e-07 3.992499e-13 1.371089e-14 1.983424e-22 2.683456e-02 1.000000e+00 1.932052e-01 8.463154e-02 6.359261e-02 1.418265e-10 1.396361e-12 9.384327e-12 5.479133e-30 22.26539133 0.53187040 2.683456e-02 1.62348697 0.08641659 NA NA NA 8.356710e-12 0.7860531 0.33851703 -25.0870392 1 0.5011355 0.8567318 -0.8551701 0.4707938 NA 0.34113188 0.268398263 -0.331646141 0.5011355 1 0.1575970 -0.15597260 0.5785749 NA 0.117807014 0.1276474406 -0.1242186864 0.8567318 0.1575970 1 -0.9955545 0.1484666 NA 0.144845939 0.090279323 -0.151732979 -0.8551701 -0.15597260 -0.9955545 1 -0.14482934 NA -0.142471001 -0.089825274 0.150538194 0.4707938 0.5785749 0.1484666 -0.14482934 1 NA 0.099717031 0.113934720 -0.0909614478 NA NA NA NA NA NA NA NA NA 0.34113188 0.117807014 0.144845939 -0.142471001 0.099717031 NA 1 0.725647866 -0.83796615 0.268398263 0.1276474406 0.090279323 -0.089825274 0.113934720 NA 0.725647866 1 -0.7621782 -0.331646141 -0.1242186864 -0.151732979 0.150538194 -0.0909614478 NA -0.83796615 -0.7621782 1 both 0.3191607 0.1660286 0.08669244 0.006055363 0.09387573 0.07509025 0.1454997 0.02854671 0.1172039 0.9332485 0.61320849 0.009712328 0.126075069 0.3402258 0.319548435 3622 578 578 2816 1962 0.6176146 0.03921381 0.1439986211 -6.0 41.0 47.0 0.02531627 6.432962e-01 0.0000000000 0.02043544 8.673417e-01 1.3876472 0.7090006 0.7436815 0.5557034 0.6830480 0.5316314 180 90 0.3245339 0.5378591 0.5635919 0.5807844 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.042241855 0.01325235 0.6854979 0.6599446 0.9203980 0.9080364 0.8892243 1.0000000 0.06124274 0.04620939 0.8242865 0.8265493 0.8262834 0.7264737 0.46923377 0.42923197 0.28191997 0.15683665 0.06808937 0.4130315 0.6146497 0.3938936 6.00 19.5 56.00 NA NA NA 226900 Bacillus cereus ATCC 14579 0.7529614 0.6279789 0.7134123 0.4306674 0.3218988 1.107849e-01 7.315031e-01 0.212677521 0.060969040 0.23799395 0.0490414052 6.971348e-82 1.662714e-83 1.550287e-59 9.135782e-93 7.695858e-42 5.529981e-46 3.317771e-10 2.189055e-07 7.070066e-49 1.299024e-07 5.832143e-08 1.232058e-13 9.794377e-01 2.738975e-02 2.569288e-04 1.319563e-03 3.025990e-14 6.971348e-82 0.46284694 0.46536622 2.013790e-01 0.21287681 0.18736091 5.832143e-08 0.266453057 0.170932548 5.204227e-13 0.5935909 0.37044979 -0.4907746 1 0.8946933 0.6231301 -0.6158451 0.7163469 0.42384778 0.27115925 0.260360383 -0.250736199 0.8946933 1 0.2877959 -0.28258558 0.7438962 0.40175473 0.140352971 0.1398545369 -0.1198088630 0.6231301 0.2877959 1 -0.9687082 0.3347431 0.27072169 0.094207114 0.077415693 -0.112356112 -0.6158451 -0.28258558 -0.9687082 1 -0.32852262 -0.26671451 -0.093173501 -0.074559387 0.113590176 0.7163469 0.7438962 0.3347431 -0.32852262 1 0.5416672 0.160644345 0.165587682 -0.1329275858 0.42384778 0.40175473 0.27072169 -0.26671451 0.5416672 1 0.101569518 0.103518630 -0.0788329617 0.27115925 0.140352971 0.094207114 -0.093173501 0.160644345 0.101569518 1 0.945239888 -0.90966606 0.260360383 0.1398545369 0.077415693 -0.074559387 0.165587682 0.103518630 0.945239888 1 -0.7865426 -0.250736199 -0.1198088630 -0.112356112 0.113590176 -0.1329275858 -0.0788329617 -0.90966606 -0.7865426 1 both 0.4017140 0.2584892 0.23861810 0.046666667 0.26238245 0.09926471 0.4938404 0.32266667 0.4447841 0.5569405 0.09257766 0.218800653 0.056239081 0.6743443 -0.348688611 3734 750 750 3941 1293 0.8543117 0.06153421 0.0592281389 -14.0 87.0 101.0 0.17823276 3.003153e-13 0.0006888326 0.16311774 3.633671e-11 3.0672483 0.3063739 0.6469835 0.4040073 0.3050348 0.4097763 186 93 0.7592804 0.4904208 0.7969404 0.8004023 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.051151580 0.01499732 0.5147849 0.6266569 0.5627530 0.6531466 0.7221683 0.6518219 0.06583072 0.06801471 0.7963626 0.8101696 0.8111813 0.6460779 0.53683055 0.34980665 0.28481577 0.31390951 0.26280087 0.3200321 0.5881033 0.2360183 0.00 17.0 53.50 NA NA NA 227377 Coxiella burnetii RSA 493 0.6092583 0.5238748 0.6784470 0.4996330 0.4785136 9.027283e-01 3.859727e-05 0.249625073 0.093381488 0.25739839 0.0653769007 1.028138e-41 7.648304e-43 1.000000e+00 4.260887e-41 1.787797e-17 2.109022e-25 1.072193e-05 2.768621e-06 1.107865e-25 1.609101e-02 1.000000e+00 8.112986e-01 1.348104e-01 3.633345e-01 4.659761e-04 1.184702e-03 6.103547e-05 1.028138e-41 -0.07724491 -0.08261041 1.609101e-02 0.98453204 0.90557575 NA NA NA 1.470996e-05 0.5464568 0.36838695 -0.3136556 1 0.7346440 0.8106419 -0.7229739 0.7380941 NA 0.22004167 0.180508574 -0.196452064 0.7346440 1 0.2971984 -0.24674422 0.8400900 NA 0.161157770 0.1022364369 -0.1436241171 0.8106419 0.2971984 1 -0.8637465 0.3328699 NA 0.048472651 0.064405130 -0.050502554 -0.7229739 -0.24674422 -0.8637465 1 -0.27065549 NA -0.059985292 -0.070664113 0.063289782 0.7380941 0.8400900 0.3328699 -0.27065549 1 NA 0.128195470 0.084358011 -0.1163104538 NA NA NA NA NA NA NA NA NA 0.22004167 0.161157770 0.048472651 -0.059985292 0.128195470 NA 1 0.649984193 -0.77489474 0.180508574 0.1022364369 0.064405130 -0.070664113 0.084358011 NA 0.649984193 1 -0.7755530 -0.196452064 -0.1436241171 -0.050502554 0.063289782 -0.1163104538 NA -0.77489474 -0.7755530 1 both 0.4739545 0.2852743 0.27879677 0.060371517 0.32555556 0.18790497 0.3998533 0.17337461 0.3270284 0.7738858 0.28171923 0.090412495 0.219028276 0.5214864 -0.042972705 1363 323 323 1224 785 0.6603081 0.06356132 0.1690227763 -9.5 24.5 34.0 0.13652748 2.245398e-05 0.0000000000 0.13992321 1.264767e-05 6.6480501 0.4732208 0.6059049 0.4650622 0.4717535 0.4720347 100 50 0.5309192 0.5506465 0.6872186 0.6891001 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.088774762 0.03595011 0.5716294 0.7176402 0.5117647 0.8535260 0.9294124 0.9941176 0.13000000 0.11447084 0.7463759 0.8813060 0.9050821 0.3860645 0.25314400 0.32280694 0.24191608 0.19343047 0.12864101 0.4710198 0.7263158 0.3723296 -3.00 7.0 42.75 NA NA NA 227882 Streptomyces avermitilis MA-4680 0.5693729 0.5096252 0.6472607 0.4421094 0.4336338 4.459870e-01 7.906601e-05 0.436928033 0.302251095 0.40742948 0.2302347062 1.121344e-62 3.405441e-64 1.528998e-15 3.330028e-24 7.072026e-24 2.120801e-17 6.975689e-15 2.513293e-15 6.972905e-60 1.004448e-04 1.671068e-05 2.523180e-01 9.841987e-01 3.651162e-01 2.152599e-11 7.842134e-13 1.245802e-31 1.121344e-62 0.28828173 0.20904847 3.632693e-02 0.42958254 0.21635073 1.671068e-05 0.503493892 0.068729390 4.439947e-31 0.7874963 0.39052955 -0.6130559 1 0.6109188 0.8651131 -0.8417876 0.5165622 0.35024042 0.18588057 0.143716311 -0.186368283 0.6109188 1 0.2587433 -0.24702537 0.5973877 0.66062184 0.049264248 0.0531235456 -0.0403755047 0.8651131 0.2587433 1 -0.9586758 0.2367393 0.12810218 0.080587473 0.023953211 -0.104672332 -0.8417876 -0.24702537 -0.9586758 1 -0.22127188 -0.11571123 -0.077276273 -0.021942945 0.100641483 0.5165622 0.5973877 0.2367393 -0.22127188 1 0.3362987 0.064400326 0.094341986 -0.0645181715 0.35024042 0.66062184 0.12810218 -0.11571123 0.3362987 1 0.012899012 0.028754272 0.0007308003 0.18588057 0.049264248 0.080587473 -0.077276273 0.064400326 0.012899012 1 0.805721150 -0.73984117 0.143716311 0.0531235456 0.023953211 -0.021942945 0.094341986 0.028754272 0.805721150 1 -0.7207589 -0.186368283 -0.0403755047 -0.104672332 0.100641483 -0.0645181715 0.0007308003 -0.73984117 -0.7207589 1 both 0.5449725 0.2146754 0.13257189 0.028443114 0.14818548 0.10845874 0.4142362 0.29453593 0.3720132 0.5972945 0.31789743 0.166815194 0.080605794 0.5663662 -0.132732399 4903 1336 1336 4313 3262 0.6069753 0.03011761 0.2391970541 -2.0 73.0 75.0 0.05438596 1.977226e-03 0.0000000000 0.03972674 4.984899e-02 1.2650125 0.4083214 0.6007774 0.4442135 0.4101570 0.4554695 200 100 0.4315099 0.4769511 0.5954733 0.5991407 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.158270447 0.02039568 0.5299318 0.5645928 0.3732877 0.8711394 0.8816643 0.9977169 0.17909946 0.17799689 0.7367689 0.8945482 0.8958834 0.6622729 0.50744204 0.49937146 0.42903843 0.29058599 0.12418807 0.3526412 0.6276923 0.3106043 -3.00 3.0 47.50 NA NA NA 227941 Chlamydophila caviae GPIC 0.5841683 0.5141686 0.7034068 0.5660502 0.5537537 8.953563e-01 2.586000e-06 0.259702207 0.078514088 0.25705708 0.0936658796 2.334803e-17 3.993202e-16 1.192013e-05 1.372303e-12 7.572397e-05 6.163713e-07 4.357453e-03 7.666369e-03 3.237019e-15 4.892624e-04 8.586511e-03 2.722770e-02 6.805186e-01 8.605190e-01 3.031221e-03 5.174923e-03 6.331071e-05 2.334803e-17 6.25013203 0.42039214 2.135432e-02 1.18465749 0.38850263 8.586511e-03 -0.105296498 -0.029363313 8.495239e-05 0.6813745 0.53116597 -4.7041955 1 0.8022922 0.8427413 -0.8414548 0.6278019 0.58724526 0.18258895 -0.028896951 -0.009426815 0.8022922 1 0.4254197 -0.42549700 0.6890434 0.64376203 0.106522143 -0.0578114906 0.0497680752 0.8427413 0.4254197 1 -0.9873532 0.2848506 0.41802001 0.105877180 -0.006342370 -0.036186184 -0.8414548 -0.42549700 -0.9873532 1 -0.28472671 -0.42158585 -0.105921970 0.001617380 0.046904669 0.6278019 0.6890434 0.2848506 -0.28472671 1 0.2839317 0.046585723 -0.014533978 0.0328545441 0.58724526 0.64376203 0.41802001 -0.42158585 0.2839317 1 0.130054579 -0.045602849 -0.0058608257 0.18258895 0.106522143 0.105877180 -0.105921970 0.046585723 0.130054579 1 0.065309588 -0.25873574 -0.028896951 -0.0578114906 -0.006342370 0.001617380 -0.014533978 -0.045602849 0.065309588 1 -0.7873584 -0.009426815 0.0497680752 -0.036186184 0.046904669 0.0328545441 -0.0058608257 -0.25873574 -0.7873584 1 both 0.4216524 0.2694357 0.19230769 0.016891892 0.22580645 0.13805970 0.2820513 0.07094595 0.2194389 0.8877532 0.42253966 0.031659364 0.218732554 0.4462463 0.107507457 702 148 148 583 415 0.6182336 0.05964991 0.5972856331 2.5 30.0 27.5 0.10377261 5.639627e-02 0.0600310775 0.10827774 4.109357e-02 8.4508535 0.5356125 0.7213197 0.4426690 0.5370370 0.4411780 100 50 0.4342322 0.6432205 0.7254697 0.7266493 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.065527066 0.01851852 0.6482162 0.6745215 0.6779661 0.8856325 0.8721558 1.0000000 0.08064516 0.08955224 0.8726880 0.8433386 0.8282124 0.6383560 0.36732953 0.18744937 0.11530588 0.09144130 0.07959303 0.4643875 0.7555556 0.3950617 -3.00 7.0 19.00 NA NA NA 228410 Nitrosomonas europaea ATCC 19718 0.5810646 0.5131429 0.7464445 0.6520959 0.6419759 9.273396e-04 0.000000e+00 0.474587264 0.233884079 0.43260702 0.2045605802 9.074950e-52 8.359163e-55 1.000000e+00 7.663985e-49 6.728022e-08 1.034826e-19 2.851033e-07 1.004246e-06 1.217819e-25 2.651076e-05 1.000000e+00 1.753621e-01 4.573136e-07 2.792083e-01 3.158056e-04 1.338809e-03 1.855967e-06 9.074950e-52 0.22308409 0.24865359 2.651076e-05 0.71947742 0.76225256 NA NA NA 9.908722e-07 0.5850818 0.39013189 -0.5491393 1 0.7631839 0.7552108 -0.7489970 0.7672190 NA 0.28037001 0.247422372 -0.275638905 0.7631839 1 0.2672202 -0.26323567 0.8472172 NA 0.149253095 0.1194040313 -0.1591483205 0.7552108 0.2672202 1 -0.9808639 0.2869989 NA 0.128212491 0.107735868 -0.128754316 -0.7489970 -0.26323567 -0.9808639 1 -0.27552888 NA -0.127324153 -0.108583379 0.127880476 0.7672190 0.8472172 0.2869989 -0.27552888 1 NA 0.123322882 0.092143402 -0.1409870541 NA NA NA NA NA NA NA NA NA 0.28037001 0.149253095 0.128212491 -0.127324153 0.123322882 NA 1 0.927303723 -0.88843918 0.247422372 0.1194040313 0.107735868 -0.108583379 0.092143402 NA 0.927303723 1 -0.7503094 -0.275638905 -0.1591483205 -0.128754316 0.127880476 -0.1409870541 NA -0.88843918 -0.7503094 1 both 0.3396843 0.2959588 0.36363636 0.099358974 0.37600716 0.34444444 0.3581927 0.06891026 0.2848436 0.9311222 0.48060326 0.024671536 0.308849634 0.3580241 0.283951701 1837 312 312 1430 1031 0.6080566 0.05653288 0.1217882332 2.5 48.0 45.5 0.05040411 2.159630e-01 0.0000000000 0.06364891 5.760768e-02 2.9438958 0.6505171 0.8405025 0.5145972 0.6461622 0.5076785 100 50 0.3934078 0.5867665 0.6697244 0.6758832 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.104518236 0.03266195 0.7278692 0.7207795 0.9047619 0.9165705 0.9068478 1.0000000 0.12712623 0.15277778 0.8214340 0.8385067 0.8304059 0.6833792 0.64072734 0.37159783 0.23466555 0.13927064 0.06781373 0.4082744 0.5778443 0.3113772 1.00 23.0 68.75 NA NA NA 233150 Mycoplasma gallisepticum R 0.8140496 0.6972543 0.8347107 0.7010860 0.5439402 2.952241e-01 3.604871e-02 0.186394468 0.010458030 0.20824445 0.0663045377 8.759392e-14 9.155152e-14 2.663615e-06 4.605897e-12 3.508960e-07 3.598774e-06 2.382154e-03 1.145495e-01 3.074034e-07 2.268806e-02 5.385229e-01 4.172007e-01 2.990919e-01 8.083666e-01 2.981477e-03 1.554843e-01 1.774758e-02 8.759392e-14 4.86271573 0.67472224 4.360821e-03 1.53518225 1.40692172 5.385229e-01 -5.021294952 -0.497396261 2.738362e-02 0.5835435 0.39145641 -0.9091910 1 0.8371485 0.7820704 -0.6480483 0.7774007 0.48834079 0.13751300 -0.048107297 0.007605232 0.8371485 1 0.4050898 -0.32124104 0.8195865 0.45389032 0.064259657 -0.0373461579 -0.0063722094 0.7820704 0.4050898 1 -0.7355321 0.3904194 0.32729904 0.062304787 -0.016694535 0.020591970 -0.6480483 -0.32124104 -0.7355321 1 -0.32558814 -0.28135529 -0.086176955 0.016077792 -0.014309267 0.7774007 0.8195865 0.3904194 -0.32558814 1 0.5921689 0.039173193 -0.018322184 -0.0191484908 0.48834079 0.45389032 0.32729904 -0.28135529 0.5921689 1 0.008697346 -0.029534485 -0.0083060172 0.13751300 0.064259657 0.062304787 -0.086176955 0.039173193 0.008697346 1 -0.303855832 0.06759657 -0.048107297 -0.0373461579 -0.016694535 0.016077792 -0.018322184 -0.029534485 -0.303855832 1 -0.7768427 0.007605232 -0.0063722094 0.020591970 -0.014309267 -0.0191484908 -0.0083060172 0.06759657 -0.7768427 1 both 0.1980198 0.2550737 0.28052805 0.016666667 0.28679245 0.23684211 0.4455446 0.12500000 0.3925620 0.8720499 0.28028060 0.057007477 0.331529600 0.4560598 0.087880362 606 60 60 591 135 0.8745875 0.10218471 0.4913527241 1.0 11.0 10.0 0.15243297 9.109494e-02 0.0334933817 0.06067527 9.672489e-01 2.4261616 0.5396040 0.7996195 0.4957788 0.5396040 0.4882206 100 50 0.5332466 0.4963582 0.6545815 0.6590486 same ~ bbfGNScore + bbfGNWithin + bbfGNMinus + cfCOG TRUE TRUE TRUE TRUE 0.1 0.074257426 0.01155116 0.6941294 0.7851774 0.6730769 0.8642140 0.9085106 0.9807692 0.08490566 0.09210526 0.7981105 0.8379559 0.8353762 0.5812281 0.50302940 0.30464366 0.19491242 0.14275621 0.10422454 0.4587459 0.6941176 0.3669725 -13.00 -1.5 8.25 NA NA NA